Specialty Crop Regulatory Assistance Case Studies 3 Hypoallergenic Peanuts - Hortense Dodo, President Oct 3-5, 2018 SCRA Workshop III Riverdale MD

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Specialty Crop Regulatory Assistance Case Studies 3 Hypoallergenic Peanuts - Hortense Dodo, President Oct 3-5, 2018 SCRA Workshop III Riverdale MD
Specialty Crop Regulatory Assistance
           Case Studies 3
      Hypoallergenic Peanuts
        Hortense Dodo, President
             Oct 3-5, 2018
      SCRA Workshop III Riverdale MD
                 www.ingateygen.com
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                hdodo@ingateygen.com
Specialty Crop Regulatory Assistance Case Studies 3 Hypoallergenic Peanuts - Hortense Dodo, President Oct 3-5, 2018 SCRA Workshop III Riverdale MD
The Peanut as a Crop
                                   Arachis hypogaea

➢ Peanut is a legume, Not a nut
➢ Arachis hypogaea is an allotetraploid (2n=4x=40)
   derived from distinct A and B genomes (A. duranensis and A. ipanesis)
➢ Said to have originated in Latin America
➢ No known species in the US, known to naturally outcross with A. Hypogaea.
➢ Self pollinated with natural outcrossing rates in the field reported from
  0 to 2.8% (Coffelt, 1989).
➢ A week after fertilization, pegs form and grow toward the ground.
➢ Seeds develop in pods at the ends of the pegs underground .
➢ No reference to A. hypogaea or any of its relatives as a weedy species has been found.

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Specialty Crop Regulatory Assistance Case Studies 3 Hypoallergenic Peanuts - Hortense Dodo, President Oct 3-5, 2018 SCRA Workshop III Riverdale MD
Taxonomy of Peanut

Source: USDA National Resource Conservation Service   Peanut varieties grown in the U.S.

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Specialty Crop Regulatory Assistance Case Studies 3 Hypoallergenic Peanuts - Hortense Dodo, President Oct 3-5, 2018 SCRA Workshop III Riverdale MD
Peanut Production 2017

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Specialty Crop Regulatory Assistance Case Studies 3 Hypoallergenic Peanuts - Hortense Dodo, President Oct 3-5, 2018 SCRA Workshop III Riverdale MD
Food Allergen Labeling & Consumer Protection Act
                                            FDA Big 8 – Common Food Allergens

                 The Food Allergen Labeling and Consumer Protection Act (FALCPA)
A law that requires all food labels in the US to list ingredients that may cause allergic reactions, and
       was effective as of January 1, 2006. While many ingredients can trigger a food allergy,
                        this legislation only specifies the 8 major food allergens.

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                             Source :https://www.dcallergy.com/services/food-allergy
Specialty Crop Regulatory Assistance Case Studies 3 Hypoallergenic Peanuts - Hortense Dodo, President Oct 3-5, 2018 SCRA Workshop III Riverdale MD
Social Impact of Peanut Allergy

➢ Of all allergic foods, Peanuts are responsible for the most severe and fatal
  food allergies and 63-67% deaths due to food anaphylaxis.
➢ Data from CDC shows Prevalence is growing.
➢ There is an increased in accidental ingestion of peanuts.
➢ There is an increased in FDA food alerts and food recalls for food
  companies.
➢ Food Recalls are the biggest threat to profitability ~ $55.5 Billion/year
   in direct + indirect costs not to count damage to brand reputation.

➢Yet to date, there is no cure
   ➢ Management is limited to strict dietary avoidance, nutritional counseling,
     and emergency treatment with Epi Pen shots.

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Specialty Crop Regulatory Assistance Case Studies 3 Hypoallergenic Peanuts - Hortense Dodo, President Oct 3-5, 2018 SCRA Workshop III Riverdale MD
Peanut proteins that frequently provoke
                  allergies and their level of allergenicity

Ara h 3 • 50 to 95 % prevalence in the peanut sensitive population
        • Are the main elicitors of allergic reactions in the USA
Ara h 2 • HIGH RISK of systemic clinical and severe symptoms
Ara h 1                 → Anaphylaxis → Coma → Death

Ara h 8 LOW RISK of systemic reaction → Risk of mild, local symptoms,
                                      → Cross- reactive with pollens
Ara h 9 LOW RISK of systemic reaction → Cross-reactive with fruits pits

IGG’s technology to eliminate most potent allergenic proteins
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Specialty Crop Regulatory Assistance Case Studies 3 Hypoallergenic Peanuts - Hortense Dodo, President Oct 3-5, 2018 SCRA Workshop III Riverdale MD
Economic Impact
➢ U.S. Food Allergies Cost $25 Billion                       (hospitalization
    and health care cost)
➢ US economic burden / food-allergic child/year:
    –   Direct medical costs: $4.3 B ($724 / child/y)
    –   Out-of-pocket costs: $5.5 B ($931 / child/y)
    –   Lost work productivity: $0.8 B ($130 / child/y)
    –   Lost work opportunities: $14.2 B ($2,399/ child/y)
    –   Per Child Total: $4,184.
➢   Government purchase for school lunch programs is reduced over 14%
➢   Banned from many public schools
➢   Restricted use in the airline industry
➢   Increasing number of lawsuits
➢   Large number of food allergy alerts and food recalls
➢   National annual cost of recalls- Estimated ~ $55.5 Billion
Specialty Crop Regulatory Assistance Case Studies 3 Hypoallergenic Peanuts - Hortense Dodo, President Oct 3-5, 2018 SCRA Workshop III Riverdale MD
Summary of US Recall incidence
                                                2015-2017
                                                  2015                        2016                         2017
                                          Total      Quantity of      Total      Quantity of      Total       Quantity of
     Recalls Summary                    Number of     products      Number of     products      Number of      products
                                         Recalls      Recalled       Recalls      Recalled       Recalls       Recalled
                                                       (In lb)                     (In lb)                      (In lb)
                                           150       21,104,848        122       58,140,787        131        20,880,574
                        I              99 (66%)     16,623,878     91 (75%)     56,464,938     100 (76%)     18,761,576
     Class              II             39 (26%)     3,176,212      26 (21%)     1,063,553       22 (16%)     1,084,788
                        III            12 (8%)      1,304,758       5 (4%)      612,292          9 (7%)      1,034,210
           STEC                              8      215,593             14      291,900              8       144,997

           Listeria                         6       82,537              11      47,398,142          15       546,278

Reasons    Salmonella                       3       4,828,874           2       19,287              1        1,076
  For
           Undeclared Allergens             58      10,268,457          34      843,536             53       8,761,495
 Recalls
           Extraneous Material              11      1,104,790           21      6,372,416           24       9,043,982

           Processing defect                4       5,259               5       1,999,078           5        387,357

           Undeclared substance             5       1,176,731           7       662,595             6        1,020,654

           Other                            55      3,42,597            28      553,837             17       971,347
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                               National annual cost of recalls - Estimated ~ $55.5 Billion
Specialty Crop Regulatory Assistance Case Studies 3 Hypoallergenic Peanuts - Hortense Dodo, President Oct 3-5, 2018 SCRA Workshop III Riverdale MD
No naturally-occurring
Allergen-Free peanut variety

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Isolation and characterization or the genomic
sequences of major peanut allergens (Ara hA1-2-3)

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Molecular Characterization of
                                           Genomic Clone of Major Allergen Ara h2

                                                  Fig. 2
                                                  Nucleotide and deduced amino acid
                                                  sequences of the gene encoding the
                                                  peanut allergen Ara h 2. From top to
                                                  bottom, a putative TATA box, the
                                                  ATG initiation codon, the first stop
                                                  codon (TGA), and the putative
                                                  polyadenylation signal are in bold.
                                                  The 21 putative amino acid signal
                                                  peptide is underlined. Six additional
                                                  stop codons are underlined. The
                                                  deduced amino acid sequence is
                                                  below the nucleotide sequence.

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Source: Journal of Allergy and Clinical Immunology, 2001: Vol 107-4-713-17
Proof of concept - Ara h2
  Production of Transgenic Peanut via Organogenesis

   Elimination of Ara h2, most potent allergen

Binary Vector pART 27, Glen et al; Plant Mol Biol. 1992 Dec;20(6):1203-7.
   Disarmed Agrobacterium EHA105 Hood EE, Trans Res, 1993, 2, 208.          13
Peanut Propagation

                      TC chamber: Controlled Temp, Light, Humidity /
Biosafety Level 1 Confined Greenhouse: No significant variation in growth transgenics vs WT
Notification for the Introduction
             of a Regulated Article

     • Yearly application for notification
             • For field releases
• Inspection by USDA-APHIS → compliance

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Field Trials

No significant difference in growth, seed formation and agronomic traits of Transgenic peanut plants vs WT
                                  A post harvest inspection by USDA-APHIS
Peanut Pollination and Weediness

➢ Self pollinated with natural outcrossing rates in the field reported from 0 to
  2.8% (Coffelt, 1989).

➢No species in the US known to naturally outcross with A. hypogaea.

➢No reference to A. hypogaea or any of its relatives as a weedy species.

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PCR, Southern, Gene Copy,
 ELISA and Western Blots

        Proteins Ara h1, Ara h2 and Ara h3
   eliminated in transgenic peanut seeds vs WT
Sandwich ELISA

                                Sandwich ELISA
Content of Allergen Ara h1 (ug/ml) is significantly lower in new peanut lines vs WT

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References

•   The Multiplier Effect Strikes Again, Stericycle Expert Solutions.
•   A Look Back at 2015 Food Recalls Undeclared Allergens and Automation: The Crossroad of Food
    Safety and the Reduction of Recalls Ready-to-Eat Foods: Preserving the Trust of the Consumer.
•   Listeria, Salmonella and Escherichia coli: Oh My! Avoiding Allergens: It's the Right Thing to Do
    Protecting Your Customers from Foodborne Illness.
•   Food Recalls from the Perspective of the Retailer- T Maberry, Food Safety Magazine's digital editor.

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