BAGECO 15 - PROGRAMME 26-30 May 2019 Lisbon, Portugal - 15th Symposium on Bacterial Genetics ...
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15th Symposium on
BAGECO 15
Bacterial Genetics and Ecology
© Massimiliano Cardinale, Renato Fani, Anna Maria Puglia
Ecosystem drivers in
a changing planet
26–30 May 2019
Lisbon, Portugal
PROGRAMME
© joyfull l Shutterstock.com
PROGRAMME OVERVIEW
Sun, 26 May Mon, 27 May Tue, 28 May Wed, 29 May Thu, 30 May
09:00–10:30 09:00–10:30 09:00–10:30
Session 1 Session 4 Session 7
Horizontal gene Host-microbe Microbiology in the
09:30–11:00
transfer, mobile genetic interactions as driving metagenomics era:
elements and antibiotic forces of ecosystems/ tools, applications and Session 9
resistance round table the emergence of a Living in an increa-
S. 13 S. 16 novel tree of life S. 18 singly aseptic world?
Microbiology in the built
and social environment
10:45–12:45 10:45–12:45 10:45–12:45
Session 2 Session 5 Session 8 S. 20
Microbial adaptation, Host-microbe The wonders of
functioning and interactions – Ecology secondary metabolism:
biodiversity in a and evolution from natural products 11:30–13:00
changing planet to novel biocatalysts Session 10
Building a modern
S. 13 S. 16 S. 18 microbial ecological
theory – conceptual &
technical advances
S. 20
13:00–15:00 13:00–13:15
COST Session Farewell S. 21
Sattellite meeting:
13:30–15:30 13:30–15:30
COST Action
Session 3 Session 6 HUPLANTcontrol
Microbiomes for Microbiomes for
sustainability: sustainability – Environ-
boosting agri- and mental pollution and S. 19
aquaculture bioremediation: current
ecosystems and future challenges
S. 14 S. 17
15:30–18:30 15:30–18:30
Poster Session I Poster Session II
With snacks and drinks With snacks and drinks
17:00–17:30
Opening S. 12
17:30–18:30
Opening Lecture
S. 12 S. 22 S. 32
18:30–20:00
Welcome Recepetion
S. 10 19:00–01:00
Social Evening
S. 11
2
TABLE OF CONTENTS
Programme Overview .............................................................................................................. 2
Organisation and Imprint ......................................................................................................... 4
Welcome Note ........................................................................................................................ 5
General Information ................................................................................................................. 6
Tips for Authors and Presenters ............................................................................................... 8
Sponsors, Exhibitors and Media Cooperations ......................................................................... 9
Social Programme
Sunday, 26 May ................................................................................................................ 10
Wednesday, 29 May ......................................................................................................... 10
Scientific Programme
Sunday, 26 May ................................................................................................................ 12
Monday, 27 May ............................................................................................................... 13
Tuesday, 28 May .............................................................................................................. 16
Wednesday, 29 May ......................................................................................................... 18
Thursday, 30 May ............................................................................................................. 20
Poster Sessions
Monday, 27 May ............................................................................................................... 22
Tuesday, 28 May .............................................................................................................. 32
Index of Invited Speakers and Presenting Authors .................................................................... 44
3
ORGANISATION AND IMPRINT Venue Date Calouste Gulbenkian Foundation 26–30 May 2019 Av. de Berna 45 A 1067-001 Lisbon, Portugal Conference Website www.bageco.org Conference Chair Conference Co-Chair PhD Rodrigo Costa PhD Newton C. M. Gomes Institute for Bioengineering and Biosciences Department of Biology & CESAM Instituto Superior Técnico University of Aveiro Lisbon (Portugal) Aveiro (Portugal) International Scientific Committee Mark Bailey (United Kingdom) Pascal Simonet (France) Marco Bazzicalupo (Italy) Kornelia Smalla (Germany) Gabriele Berg (Austria) Christoph C. Tebbe (Germany) Janet Jansson (United States) James Tiedje (United States) Amalia Karagouni (Greece) Jan Dirk van Elsas (The Netherlands) Ines Mandic-Mulec (Slovenia) Timothy M. Vogel (France) James Prosser (United Kingdom) Elizabeth Wellington (United Kingdom) Local Organising Committee Francisco Coelho Tina Keller-Costa Isabel Sá-Correia Célia M. Manaia Rodrigo Costa Paula V. Morais Newton C. M. Gomes Diogo Neves Proença Conference Organisation Conventus Congressmanagement & Marketing GmbH Paula Hartmann/Jenny Gotzmann Carl-Pulfrich-Strasse 1 I 07745 Jena, Germany Phone +49 3641 31 16-326/-376 I bageco@conventus.de I www.conventus.de Design/Layout Layout www.krea.tif–design.de Print siblog – Gesellschaft für Dialogmarketing, Fulfillment & Lettershop mbH Circulation 300 Editorial Deadline 6 May 2019 4
WELCOME NOTE
Dear colleagues,
During the last few decades, the bi-annual BAGECO symposium has established itself as a leading
European conference in prokaryotic genetics and ecology. The BAGECO 15 symposium will once
again unite leading scientists to debate the most pressing questions in the broad fields of microbio-
logy, microbial ecology, metagenomics and complementary disciplines.
In particular, BAGECO 15 aims to highlight the pivotal roles that microorganisms play in the func-
tioning of natural and man-made environments. Beyond the acknowledged and acute pressures
that natural biomes face due to modern climate change, the way in which we perceive ourselves
and the natural world is as well changing rapidly. Our greater understanding of the assembly and
functioning of microbiomes in nature, and improved ability to harness the diverse metabolism of
cultured and uncultured microorganisms, are expected to have a profound impact on how we manage
and mitigate problems of environmental, societal and public health concern within a future circular
economy framework.
Microorganisms are in the limelight of this changing planet, and it is the duty of our community to
envision how fundamental knowledge on microbial physiology, genetics and ecology can contribute
to the sustainable use of ecosystems, the development of cost-effective environment conservation
and remediation strategies, improvements in food production and the promotion of human and animal
health, and to steer the discovery of new drugs and biosensors. In this context, BAGECO 15 offers
an exciting multidisciplinary programme at the forefront of scientific knowledge, inviting high-quality
research on contemporary issues of relevance to modern microbial genetics and ecology.
The programme is well suited to the participation of early- and mid-carrier scientists who wish to
showcase and disseminate their research in a highly interactive symposium. Importantly, BAGECO
symposia are traditionally organized as a single session, promoting better exchange between all
delegates and wider dissemination of the presented research to a truly diverse audience. Ample
opportunities for discussion and networking are offered during the poster sessions, which provide
appropriate time and space for delegates to interact with one another and explore all the work being
presented at the symposium in its full extent.
We hope that the symposium will provide plenty of opportunities for you to interact and share your
work with renowned scientists in the field while experiencing the unique culture and landscape of-
fered by Lisbon and surrounding areas.
We welcome you to Lisbon!
Rodrigo Costa Newton C. M. Gomes
Conference Chair of BAGECO 15 Conference Co-Chair of BAGECO 15
5
GENERAL INFORMATION
Opening Hours
Sunday Monday Tuesday Wednesday Thursday
Industrial Exhibition – 10:00–18:30 10:30–18:30 10:00–13:00 –
Poster Exhibition – 10:30–18:30 10:30–18:30 – –
Check-In 15:00–19:00 08:30–18:00 08:30–18:00 08:30–13:00 09:00–11:30
Media Check 15:00–19:00 08:30–18:00 08:30–18:00 08:30–13:00 09:00–11:30
Name Badge
Admission to scientific sessions and to the industrial exhibition is restricted to participants wearing
their badge. Please wear your name badge during all conference events, including the welcome
reception and the social evening. Name badges for exhibitors will be given to the exhibit personnel.
Certificate of Attendance
Certificates of attendance will be send to all participants via email after the conference. Please
make sure to provide your email address.
Check-In and Media Check
The Check-In can be found on the left hand side, just a few steps downstairs, after you enter the
conference area. At the Check-In desk you can also test your presentation on a laptop (Media Check).
WIFI Access
WIFI is available for free throughout the whole conference.
User name: BAGECO15
Access key: Lisbon2019
Industrial Exhibition
There is an accompanying industrial exhibition. The exhibitors are looking forward to welcoming
you and to present their comprehensive range of innovative products.
6WISSENSCHAFTLICHES PROGRAMM
You examine.
We publish.
Aquatic Microbial Ecology
• international peer-reviewed journal
• very high quality of scientific contributions
• rigorous review process
AME
• close attention to detail during production
Inter-Research
ame.int-res.com
ir@int-res.com
@ame_intres
/AquatMicrobEcol
7TIPS FOR AUTHORS AND PRESENTERS Submitting Your Presentation/Technical Information The presentation should be prepared as PDF, MS Office PowerPoint 2016 for Windows or key for Macintosh DVD in format 16:9. A presentation notebook with a PDF reader and MS Office PowerPoint 2016 will be provided. The use of personal notebooks is possible upon agreement. However, it may interrupt the flow of the programme in the lecture hall. Please provide an adapter for VGA if necessary. A notebook, presenter and laser pointer are available at the speaker’s podium in the lecture hall. If necessary a technical supervisor can help you. To guarantee a smooth running programme please use a USB-stick (not write protected) with your presentation. Please upload your presentation directly at the speaker’s podium notebook. Time Allotment Please prepare your presentation for the allotted amount of time. Chairs and moderators may interrupt should you overrun your time limit. Speaking time is assigned as follows (speaking +discussion time): Opening Lecture 50 + 10 minutes Invited Lectures 25 + 5 minutes Abstract Authors 10 + 2 minutes/12 + 3 minutes Poster Sessions Posters should be no larger than DIN A0 (118.9 cm x 84.1 cm). Those are only to be used with the designated pins. Pinboards will be numbered. You will find your poster number and session in the programme book on page 22–43. All posters are displayed in Sala 1 & 2. Poster presenters are asked to be present during their poster session. Please note that the poster session will be split into two parts. Posters of poster session I should be erected on 27 May by 10:30 and removed on 27 May directly after the session. Posters of poster session II should be erected on 28 May by 10:30 and removed on 28 May directly after the session. All posters that have not been removed by then will be considered as waste. FEMS Poster Prizes The best posters will be honoured with a poster prize sponsored by FEMS: 1st place: 150 EUR and free access to the journal 2nd place: 100 EUR and free access to the journal Winners will be announced at the closing session on Thursday, 30 May. 8
SPONSORS, EXHIBITORS AND MEDIA COOPERATIONS
Scientific Sponsors and Supporting Societies/Institution
International Society for Microbial Ecology (ISME)
European Federation of Microbiological Societies (FEMS)
Exhibitors
GENEWIZ Germany GmbH
NZYTech
Sarstedt, S.A.
Sponsor Conference Bags and Pens
STAB VIDA
Media Cooperations
Springer US
Microbial Ecology
Inter Research Science Center
Aquatic Microbial Ecology
Marine Ecology
S. Karger AG
Journal of Molecular Microbiology and Biotechnolgy
Trillium GmbH
Trillium Diagnostik
State at printing
9SOCIAL PROGRAMME I SUNDAY, 26 MAY
Welcome Reception
All participants are welcome to join their friends and colleagues for the
Welcome gathering in the frame of the 15th Symposium on Bacterial Genet-
ics and Ecology. Snacks and drinks will be provided during the evening.
Time 18:30–20:00
Venue Calouste Gulbenkian Foundation
Av. de Berna 45A I 1067-001 Lisbon
Price included for conference participants
20 EUR for accompanying persons
© CandyBox Images - Fotolia.com
SOCIAL PROGRAMME I WEDNESDAY, 29 MAY
EKO Tuk Tour “old town”
Use this great opportunity to drive around Lisbon. Visit the best points of
view and enjoy a few hours of the modern and historical city.
Time 13:00 Departure at the conference location
15:30 Arrival at the city centre
Price 40 EUR (incl. lunchbox)
Request upon availabity. The tour will
happen by a minimum booking of
15 participants only.
© 297645485 l Mapics l shutterstock.com
HIPPO trip
Take the chance to explore Lisbon from land and river! Learn about the rich
history and culture of Portugal’s capital, while enjoying the thrill of being in
a “bus” on the Tagus River.
Time 14:30 Departure at the conference location
16:15 Doca de Santo Amaro
Price 35 EUR (incl. lunchbox)
Request upon availabity. The tour will
happen by a minimum booking of
20 participants only.
© Anne-Lotte O´Dwyer I wikimedia.org
10SOCIAL PROGRAMME I WEDNESDAY, 29 MAY
Suggestions for things to do and see in Lisbon
Further suggestions (tours and restaurants) can be found online at
www.bageco.org/programme/social-programme.
Explore Lisbon
You can explore Lisbon by yourself with the Lisboa card. The card includes
free passing in 29 museums, monuments and places of interest and discount
for certain services. There are cards with different durations of validity:
72 hrs 40 EUR for adults
48 hrs 32 EUR for adults
24 hrs 19 EUR for adults
For further information and card booking please visit
www.visitlisboa.com.
© Xemenendura I Wikimedia.org
Social Evening
We cordially invite you to spend a wonderful evening in an elegant and
urban-chic atmosphere at the Monte Claros Restaurant. Enjoy wining and
dining with the best view the city has to offer. You will have the chance to
enjoy some great traditional music and to round off the day dancing and
chatting with friends and colleagues.
Time 19:00–01:00
Price 60 EUR
Venue Monte Claros Restaurant
Estrada de Montes Claros
1400-047 Lisbon
© Mote Claros Restaurant
11SCIENTIFIC PROGRAMME I SUNDAY, 26 MAY
17:00–17:30 Opening of BAGECO 15
Chair Rodrigo Costa (Lisbon/Portugal)
Welcome address of the conference chairs
Rodrigo Costa (Lisbon/Portugal), Newton C. M. Gomes (Aveiro/Portugal)
17:30–18:30 Opening Lecture
Chairs Rodrigo Costa (Lisbon/Portugal), Newton C. M. Gomes (Aveiro/Portugal)
17:30 The future of microbiome research – from products to data
Nikos Kyrpides (San Francisco, California/United States)
18:30–19:30 Welcome Reception at the Venue
See page 10
12SCIENTIFIC PROGRAMME I MONDAY, 27 MAY
09:00–10:30 Session 1 – Horizontal gene transfer, mobile genetic elements and antibiotic
resistance
Chairs Isabel Sá-Correia (Lisbon/Portugal), Célia M. Manaia (Porto/Portugal)
09:00 The transferable resistome of produce – The missing link?
IL 1 Kornelia Smalla (Braunschweig/Germany)
09:30 Mobile DNA in arctic and antarctic microbiocenoses – diversity, horizontal
O1 transfer and role of plasmids in adaptation of psychrotolerant bacteria to
extreme environments
Lukasz Dziewit (Warsaw/Poland)
09:42 IncN plasmids are vectors disseminating colistin resistance in wastewater
O2 microbiota
Zhuofeng Yu (Copenhagen/Denmark)
09:54 Genetic globetrotter – a marine plasmid hitch-hiking vast phylogenetic and
O3 geographic distances
Jörn Petersen (Braunschweig/Germany)
10:06 Phylogenomics illuminates the evolution of acquired and intrinsic resistance in
O4 environmental multidrug-resistant (MDR) Stenotrophomonas
Pablo Vinuesa (Cuernavaca/Mexico)
10:18 Bacillus subtilis – bacterial sex is more popular between less related organisms
O5 Polonca Stefanic (Ljubljana/Slovenia)
10:30–10:45 Industrial exhibition and coffee break
10:45–12:45 Session 2 – Microbial adaptation, functioning and biodiversity in a changing
planet
Chairs Tina Keller-Costa (Lisbon/Portugal), Kornelia Smalla (Braunschweig/Germany)
10:45 Contaminant antibiotic resistance in water environments
IL 2 Célia M. Manaia (Porto/Portugal)
11:15 Microbes in the city – a metagenomic trait-based analysis of microbial
O6 metacommunity structure along urbanization gradients
Shinjini Mukherjee (Leuven/Belgium)
13SCIENTIFIC PROGRAMME I MONDAY, 27 MAY
11:27 Impact of environmental perturbations on multiple ecological processes of
O7 adaptation in ammonia oxidisers
Cecile Gubry-Rangin (Aberdeen/United Kingdom)
11:39 Understanding the reversion of soil CH4 flux across the forest-to-pasture
O8 conversion in the Amazon rainforest
Siu Mui Tsai (Piracicaba/Brazil)
11:51 Exploring the potential and ecological implications of atmospheric gas
O9 scavenging in soil acidobacteria
Stephanie A. Eichorst (Vienna/Austria)
12:03 Biogeographical and depth patterns of global marine prokaryotic community
O 10 structure and function
Carmen Astudillo-Garcia (Auckland/New Zealand)
12:15 Life in the dark – patterns and functions of groundwater microbiomes
IL 3 Kirsten Küsel (Jena/Germany)
12:45–13:30 Industrial exhibition and lunch break
13:30–15:30 Session 3 – Microbiomes for sustainability – boosting agri- and aquaculture
ecosystems
Chairs Gabriele Berg (Graz/Austria), Newton C. M. Gomes (Aveiro/Portugal)
13:30 Probiotic bacteria as disease control agents in marine fish larval rearing
IL 4 Lone Gram (Lyngby/Denmark)
14:00 Facilitation and strain variability maintain persistence of generalist microbial
O 11 communities in the European seabass gut
Itzik Mizrahi (Be’er Sheva/Israel)
14:15 Biological Denitrification Inhibition (BDI) in the field – strategy to improve plant
O 12 nutrition and growth
William Galland (Villeurbanne/France)
14:30 Reduced potential for the degradation of phenolic compounds in the
O 13 rhizosphere of apples grown in replant soils
Viviane Radl (Oberschleißheim/Germany)
14:45 Plant protection from a distance
O 14 Adam Ossowicki (Wageningen/The Netherlands)
14SCIENTIFIC PROGRAMME I MONDAY, 27 MAY
15:00 Bioinformatics tools and strategy to select microbial strains for fermented food
O 15 products
Hélène Falentin (Rennes/France)
15:15 High-throughput screening for beneficial synthetic microbial communities
O 16 Jonathan Friedman (Rehovot/Israel)
15:30–18:30 Poster Session I
Room Sala 1 and 2
See page 22
15SCIENTIFIC PROGRAMME I TUESDAY, 28 MAY
09:00–10:30 Session 4 – Host-microbe interactions as driving forces of ecosystems
round table
Chairs Tina Keller-Costa (Lisbon/Portugal), Michael Sweet (Derby/United Kingdom)
09:00 Microbiome manipulation of marine hosts and its potential to foster ecosystem
IL 5 resilience
Raquel S. Peixoto (Rio de Janeiro/Brazil)
09:30 Round Table – “Microbiome Manipulation using Beneficial Microbes” promoted
by BAGECO and the Beneficial Microbes for Macroorganisms (BMMO) network
Panelists
Raquel S. Peixoto (Rio de Janeiro/Brazil), Lone Gram (Lyngby/Denmark)
Ute Hentschel (Würzburg/Germany), Gabriele Berg (Graz, Austria)
10:30–10:45 Industrial exhibition and coffee break
10:45–12:45 Session 5 – Host-microbe interactions: Ecology and evolution
Chairs Raquel S. Peixoto (Rio de Janeiro/Brazil), Rodrigo Costa (Lisbon/Portugal)
10:45 Sponge holobionts – from microbes to ecosystems
IL 6 Ute Hentschel (Würzburg/Germany)
11:15 Vibrio cholerae in food vacuoles expelled by protozoa are more infectious
O 17 in vivo
Diane McDougald (Sydney/Australia)
11:30 Heritability and domestication of the cereal seed microbiota
O 18 Massimiliano Cardinale (Lecce/Italy)
11:45 Insights into the diazotrophic microbiome of wetland rice and its N2-fixation
O 19 activity
Dagmar Woebken (Vienna/Austria)
12:00 Biologically regulated biomineralization promotes persistent infections and
O 20 biofilm formation
Ilana Kolodkin-Gal (Rehovot/Israel)
12:15 Modulation of fish microbe-interactions in recirculating aquaculture systems
IL 7 (RAS)
Newton C. M. Gomes (Aveiro/Portugal)
12:45–13:30 Industrial exhibition and lunch break
16SCIENTIFIC PROGRAMME I TUESDAY, 28 MAY
13:30–15:30 Session 6 – Microbiomes for sustainability – Environmental pollution and
bioremediation – current and future challenges
Chairs Francisco Coelho, Newton C. M. Gomes (Aveiro/Portugal)
13:30 Central role of microbial biofilms in the biodegradation of hydrocarbons
IL 8 Frederic Coulon (Cranfield/United Kingdom)
14:00 DNA- and transcriptome-stable isotope probing together with the genome
O 21 analysis of Zoogloea oleivorans reveal taxonomic and functional insights into
microaerobic toluene degradation
András Táncsics (Gödöllő/Hungary)
14:15 Effects of plant and soil inoculum on abundance of bacterial and archaeal
O 22 N-cycling guilds after remediation of heavy metal contaminated soil
Marjetka Suhadolc (Ljubljana/Slovenia)
14:30 Development and optimization of an efficient treatment strategy for
O 23 bioremediation of chlorinated hydrocarbon contaminated areas – from
laboratory to field
Zsuzsanna Nagymáté (Budapest/Hungary)
14:45 Metagenome assembled genomes from petroleum reservoirs and oil-degrading
O 24 methanogenic enrichments unveiling syntrophic associations for crude oil
biodegradation
Isabel Natalia Sierra-García (Bucaramanga/Colombia)
15:00 Molecular design of biotools for metals recycling and bioremediation
IL 9 Paula V. Morais (Lisbon/Portugal)
15:30–18:30 Poster session II
Room Sala 1 and 2
See page 32
17SCIENTIFIC PROGRAMME I WEDNESDAY, 29 MAY
09:00–10:30 Session 7 – Microbiology in the metagenomics era – tools, applications and
the emergence of a novel tree of life
Chairs Nikos Kyrpides (Berkeley, California/Unites States)
Diogo Neves Proença (Coimbra/Portugal)
09:00 Horizonal transfer of antibiotic resistance genes in urban water systems
IL 10 Søren J. Sørensen (Copenhagen/Denmark)
09:30 Microbial community analysis of a Dutch drinking water treatment plant, with a
O 25 special focus on microorganisms involved in N, C and Fe cycling
Lianna Poghosyan (Nijmegen/The Netherlands)
09:45 Evolution and metabolic diversity of the Thaumarchaeota
O 26 Paul Sheridan (Aberdeen/United Kingdom)
10:00 Populating the tree – expanding our understanding of the metabolic versatility of
O 27 environmental Nitrospira
Hanna Koch (Nijmegen/The Netherlands)
10:15 Unveiling methanogenic and methanotrophic populations through metagenome
O 28 assembled genomes of enriched Amazonian soils
Rodrigo Gouvêa Taketani (Piracicaba/Brazil)
10:30–10:45 Industrial exhibition and coffee break
10:45–12:45 Session 8 – the wonders of secondary metabolism – from natural products
to novel biocatalysts
Chairs Rodrigo Costa (Lisbon/Portugal), Thomas Wichard (Jena/Germany)
10:45 Role of chemical mediators in aquatic interactions across the
IL 11 prokaryote-eukaryote boundary – the sea lettuce ulva only gets into shape
with the right bacteria
Thomas Wichard (Jena/Germany)
11:15 Marine bacteria and fungi as promising source for new antibiotics
O 29 Jutta Wiese (Kiel/Germany)
11:30 Actinobacteria from the South Pacific – chemical diversity of specialized
O 30 metabolites
Beatriz Cámara (Valparaíso/Chile)
18SCIENTIFIC PROGRAMME I WEDNESDAY, 29 MAY
11:45 Mutualism is not supported by Fe processing but by growth-related factors in
O 31 Fe-cycling co-cultures
Rebecca Cooper (Jena/Germany)
12:00 Forest soil bacteria – an underexplored niche of novel biocatalysts for biomass
O 32 conversion
Camelia Algora (Prague/Czech Republic)
12:15 Exploring a soil metagenome for novel bacterial phyla and biosynthetic gene
O 33 clusters
Mark Liles (Auburn, Alabama/United States)
12:30 Rhizosphere microbiome mediates systemic root exudation of secondary
O 34 metabolites
Elisa Korenblum (Rehovot/Israel)
13:00–19:00 Free afternoon
see page 10
13:00–15:00 COST Session – Sattellite meeting: COST Action HUPLANTcontrol – control of
human pathogenic microorganisms in plant production systems
Chairs Gabriele Berg (Graz/Austria)
13:00 Plasmid mediated adaptation of plant-associated bacteria
IL 12 Kornelia Smalla (Braunschweig/Germany)
13:15 The natural resistome of microbial communities in plants and lichens
IL 13 Tomislav Cernava (Graz/Austria)
13:30 Microbial interactions as potential drivers for small scale spatial organisation of
IL 14 the plant root microbiome
Søren J. Sørensen (Copenhagen/Denmark)
13:45 Evolution of microbiome traits and antibiotic resistances
IL 15 Jan Dick van Elsas (Groningen/The Netherlands)
14:00 The plant microbiome – antimicrobial resistances, inter-connected microbiomes
IL 16 and the one health concept
Gabriele Berg (Graz/Austria)
14:15 Round table discussion
19SCIENTIFIC PROGRAMME I WEDNESDAY, 29 MAY
15:15–19:00 Free afternoon
see page 10
19:00–01:00 Social evening and party
see page 11
SCIENTIFIC PROGRAMME I THURSDAY, 30 MAY
09:30–11:00 Session 9 – Living in an increasingly aseptic world? Microbiology in the built
and social environment
Chairs Célia M. Manaia (Porto/Portugal), Gabriele Berg (Graz/Austria)
09:30 Built environments – new insights into the microbiome and resistome
IL 18 Gabriele Berg (Graz/Austria)
10:00 Drinking water microbiota – astounding biodiversity, almost unexplored
O 35 Antonia Bruno (Milan/Italy)
10:15 Automated diagnostic system for pathogen and resistome profiling in clinical
O 36 and environmental settings
Rui Pedro Abreu Pereira (Coventry/United Kingdom)
10:30 High-throughput omic approaches to characterize the microbiome-cervix
O 37 frontier during HPV infections and cervical dysplasia
Filipa Godoy-Vitorino (San Juan/Puerto Rico)
10:45 Bacterial survival in microscopic wetness
O 38 Nadav Kashtan (Rehovot/Israel)
11:00–11:30 Industrial exhibition and coffee break
11:30–13:00 Session 10 – Building a modern microbial ecological theory – conceptual and
technical advances
Chairs Francisco Coelho (Aveiro/Portugal), Rodrigo Costa (Lisbon/Portugal)
11:30 What are the mechanisms behind alternative community states and how do we
IL 19 distinguish between them?
Karoline Faust (Leuven/Belgum)
12:00 Unravelling the ecological processes shaping the microbial rare biosphere
O 39 Xiu Jia (Groningen/The Netherlands)
20SCIENTIFIC PROGRAMME I THURSDAY, 30 MAY
12:15 Microbial life strategies in the detritusphere – DNA-SIP provides quantitative
O 40 data on carbon utilization by copiotrophs and oligotrophs
Marie Uksa (Stuttgart/Germany)
12:30 Bacterial warfare – the arsenal goes viral
O 41 João Gama (Tromsø/Norway)
12:45 Mechanisms of interaction between members of a biofilm community
O 42 Scott Rice (Nanyang/Singapore)
13:00–13:15 Farewell and announcements of BAGECO 16
Rodrigo Costa (Lisbon/Portugal)
21POSTER SESSION I I MONDAY, 27 MAY
Horizontal gene transfer, mobile genetic elements and antibiotic resistance
P1 Phytochemical composition and antibacterial activity of extracts of Cajanus cajan (L.)
Millsp., Vernonia amygdalina Delile and Psidium guayava L. used in the treatment of
diarrheal infections in Benin
Amadou Afoussatou (Cotonou/Benin)
P2 The impact of sediment concentrations on the survival of blaCTX-M-15-producing E. coli
in wastewater released to seawater and freshwater
Yasir Bashawri (Bangor/United Kingdom)
P3 Phaeobacter inhibensDSM 17395 – plasmid conjugation as a smart strategy for niche
adaptation
Lukas Birmes (Braunschweig/Germany)
P4 Profiling of naturally occurring antibiotic resistances in plant microbiomes
Tomislav Cernava (Graz/Austria)
P5 Identifying drivers of antibiotic resistance in UK river systems
James Delaney (Coventry/United Kingdom)
P6 Improved bacterial hospitality to plasmids
João Gama (Tromsø/Norway)
P7 Plasmid-associated antibiotic resistance genes in soil metagenomes from Fildes
Peninsula (King George Island, Antarctica)
Matías Giménez (Montevideo/Uruguay)
P8 The abundance of plasmids in E. coli increases level of antibiotic resistance in urban
waterways
Krassimira Hristova (Milwaukee, Wisconsin/United States)
P9 Detection of population dynamics and low abundant Staphylococcus species in patients
undergoing prosthetic joint replacement surgery using targeted tuf and 16S rRNA
sequencing
Søren Iversen (Copenhagen/Denmark)
P 10 Antibiotic resistance in agricultural soil associated to the application of cow
manure-derived amendments from ecological and conventional livestock farms
Leire Jauregi (Derio/Spain)
P 11 cancelled
22POSTER SESSION I I MONDAY, 27 MAY
P 12 Horizontal spread of transposons – transposition during natural transformation
Klaus Harms (Tromsø/Norway)
P 13 Hospital microbiome and resistome
Kaisa Koskinen (Graz/Austria)
P 14 Plasmid-based tools to facilitate studies of polar Psychrobacter spp
Robert Lasek (Warsaw/Poland)
P 15 Anthropogenic impacts on the environmental resistome in the coastal water of South
China Sea
Stanley Lau (Clear Water Bay/Hong Kong)
P 16 Following the mobile resistome through the path of reclaimed wastewater – from
treatment plants to irrigated crops
Roberto Marano (Rishon Lezion/Israel)
P 17 Tracking antibiotic resistance genes in the treated wastewater irrigated soil and crops
Mitiku Mihiret (Midreshet Ben-Gurion/Israel)
P 18 cancelled
P 19 Fungal highways – novel dissemination routs to differentially enrich and selectively
disperse the antibiotic resistance genes (ARGs) in environment
Rashid Nazir (Abbottabad/Pakistan)
P 20 Following plasmids and their host genomes in urban wastewater communities by an
integrative sequencing approach
Joseph Nesme (Copenhagen/Denmark)
P 21 The impact of plasmid host range on the dissemination of antibiotic resistance genes to
enterobacteriaceae in the urban wastewater microbiome
Asmus Kalckar Olesen (Copenhagen/Denmark)
P 22 Detection and quantification of antibiotic resistance genes along the wastewater treatment
process by TaqMan multiplex qPCR
Mónica Nunes (Oeiras, Lisboa/Portugal)
P 23 cancelled
P 24 Transfer of tetracycline-resistance genes from manure to soil depends on soil indigenous
microorganisms
Eduardo Pérez-Valera (Ceske Budejovice/Czech Republic)
23POSTER SESSION I I MONDAY, 27 MAY
P 25 cancelled
P 26 Phenotypic and genomic features of Klebsiella pneumoniae isolates from clinical and
environmental sources – does the origin matter?
Jaqueline Rocha (Porto/Portugal)
P 27 Oral administration of antibiotics increased the potential mobility of bacterial resistance
genes in the gut of the fish Piaractus mesopotamicus
Johan Sebastian Saenz (Munich/Germany)
P 28 Social interactions influence biofilm formation among wastewater bacteria
Ana Filipa Silva (Copenhagen/Denmark)
P 29 Physiological and genomic characterization of clinical and environmental strains of an
opportunistic pathogen Paracoccus yeei (Alphaproteobacteria)
Magdalena Szuplewska (Warsaw/Poland)
P 30 Comparative genomic analysis in gut microbiomes of broiler and house hold chickens for
evalauating the status of selected ARGs and MGEs in small scale slaughter houses
Hassan Waseem (East Lansing/United States)
P 31 Bloodstream bacterial pathogens and their antibiotic resistance patterns in hospitalised
patients at the yaounde university teaching hospital
Baiye William Abange (Yaounde/Cameroon)
P 32 Spatial patterns of antibiotic resistance during bacterial range expansions
Anja Worrich (Leipzig/Germany)
P 33 Thymol mediates bactericidal activity against Staphylococcus aureus by
binding IolS and enhancing its aldo-keto reductase (AKR) activity
Xiaohui Zhou (Storrs, Connecticut/United States)
Microbial adaptation, functioning and biodiversity in a changing planet
P 34 Dominance of an unclassified Betaproteobacteria lineage in the spring waters of the Buda
Thermal Karst System (Hungary)
Dóra Anda (Budapest/Hungary)
P 35 Effects of precipitation regime and N-availability on the dynamics of plant-microbial and
soil biogeochemical cycling responses to rewetting
Romain Barnard (Dijon/France)
24POSTER SESSION I I MONDAY, 27 MAY
P 36 Carbon source concentration shifts bacterial interactions in snow microcosms
Benoît Bergk Pinto (Ecully/France)
P 37 Do bacteria shape the soil structure by producing EPS?
Antje Bettermann (Braunschweig/Germany)
P 38 Dynamics of methane-cycling microbial communities across seasons in Amazonian
floodplains sediments
Júlia Brandão Gonitjo (Piracicaba/Brazil)
P 39 Deciphering strategies of a river-sediment microbial community to cope with
anthropogenic metal contamination
Valentine Cyriaque (Mons/Belgium)
P 40 Bacterial communities from extreme environments – Vulcano Island (Aeolian Islands,
Sicily/Italy)
Sara Del Duca (Sesto Fiorentino/Italy)
P 41 Eco-evolutionary dynamics of ATP-producing pathways in microbial communities
Jan Dolinsek (Dübendorf/Switzerland)
P 42 Building up and growing a river model bacterial community in different media suggests
the existence of positive interactions within the community
Isabelle George (Brussels/Belgium)
P 43 cancelled
P 44 The lingocellulose degrading potential of a thermophilic microbial consortium isolated
from a thermal springs field in northern Greece
Dimitris Hatzinikolaou (Zografou, Attica/Greece)
P 45 From pine to pasture – investigating changes in microbial composition and functional
potential associated with land use conversion
Syrie M Hermans (Auckland/New Zealand)
P 46 Meta-omics investigation of soil communities along a natural climatic gradient in the
Finnish Arctic tundra
Jenni Hultman (Helsinki/Finland)
25POSTER SESSION I I MONDAY, 27 MAY
P 47 Two Chloroflexi lineages independently evolved the ability to persist on atmospheric
hydrogen and carbon monoxide
Zahra Islam (Caulfield North/Australia)
P 48 Novel alkaliphilic and moderately halophilic bacteria harbored by bayonet grass
rhizosphere soil in Hungarian soda ponds
Júlia M. Aszalós (Budapest/Hungary)
P 49 Addressing the impact of temperature on Vibrio harveyi adaptation in the time of climate
change
Vladimir Kaberdin (Leioa/Spain)
P 50 Microbial community of the meromictic arctic Lake Bolshie Hruslomeny, North European
Russia
Vitaly Kadnikov (Moscow/Russia)
P 51 Microbially induced mineral precipitation in serpentinite-hosted alkaline springs of the
Voltri Massif, Italy
Aysha Kamran (Göttingen/Germany)
P 52 Functional signatures of the microbiomes of soft corals in health and disease states
Tina Keller-Costa (Lisbon/Portugal)
P 53 Impact of ecosystem changes due to permafrost thaw on potential greenhouse gas
emission
Christoph Keuschnig (Ecully/France)
P 54 Long-term warming impacts moss-associated bacterial community composition and
competition in Icelandic heathlands
Ingeborg Klarenberg (Akureyri/Iceland)
P 55 At the playground of evolution in the presence and absence of rivals
Konrad Korzeniowski (Leuven/Belgium)
P 56 Uncovering the microbiota of the deep-sea sediments from the Southern Gulf of Mexico
Asunción Lago-Lestón (Ensenada/Mexico)
P 57 Denitrification in Agrobacterium fabrum C58 – genes, regulation and role in fitness
Solène Lecomte (Villeurbanne/France)
P 58 Anaerobic adaptation of D-glucose PTS-deficient E. coli generates succinic acid
fermenting cells
Sang Jun Lee (Anseong/South Korea)
26POSTER SESSION I I MONDAY, 27 MAY
P 59 Understanding the ecological adaptations and community dynamics of the human gut
microbiome during Clostridium difficile infection using an in vitro system
Bettina Lengger (Copenhagen/Denmark)
P 60 Climate changes and land use effects on methane cycling of eastern amazonian soils
Fernanda Mancini Nakamura (Piracicaba/Brazil)
P 61 CDOM causes shifts in the microbial community in shallow lakes
Anikó Mentes (Budapest/Hungary)
P 62 Microbial screening of subsurface radioactive water springs in the Czech Republic
Gabriela Nováková (Prague/Czech Republic)
P 63 Comparative genome analysis reveals habitat-specific adaptations of two Methylocystis
species from wetlands
Igor Oshkin (Moscow/Russia)
P 64 Ammonia-oxidizing archaea and bacteria in Amazonian forest soils and floodplain forest
sediments
Fabiana Paula (Piracicaba/Brazil)
P 65 Impact of Ag2S NPs on soil bacterial community – a terrestrial mesocosm approach
Sara Peixoto (Aveiro/Portugal)
P 66 cancelled
P 67 Linking litter microbial communities to substrate quality, environmental conditions and
decomposition dynamics – insights from two studies using tea bags
Silvia Pioli (Bolzano/Italy)
P 68 Plasmids in gut environments
Maraike Probst (Innsbruck/Austria)
P 69 Diversity of Brazilian Soda Lakes’ associated microbiome
Simone Raposo Cotta (Piracicaba/Brazil)
P 70 Asymmetries in gene expression dynamics as a potential enhancer of microbial resilience
Andre Ribeiro (Tampere/Finland)
P 71 Calcareous sponge holobiont in a changing ocean
Bárbara Ribeiro (Rio de Janeiro/Brazil)
27POSTER SESSION I I MONDAY, 27 MAY
P 72 Probing the performance of Lactobacillus sanfranciscensis strains in wheat and rye
sourdough by using CRISPR-locus length polymorphism
Esther Rogalski (Freising/Germany)
P 73 Towards characterization of microbial interactions – functional annotation by clustering
orthologous groups
João P. Saraiva (Leipzig/Germany)
P 74 Nitrification by archaea fuels high nitrous oxide emissions from arctic peatlands
Henri Siljanen (Kuopio/Finland)
P 75 Farming practices shape the structural and functional diversity of rhizospheric microbial
community of Cajanus cajan
Upma Singh (New Delhi/India)
P 76 Targeted meta-genomics evidences role of IS1071 in microbial community adaptation to
degradation of organic pollutants
Dirk Springael (Heverlee/Belgium)
P 77 Earth, air and water – oxygen availability influences comammox activity in soil
Cécile Thion (Ecully/France)
P 78 Global airborne microbial communities controlled by surrounding earth surfaces and
wind conditions
Romie Tignat-Perrier (Saint Martin d’Hères/France)
P 79 Moisture differently affects methane microbial communities of forest and pasture soils in
the Eastern Amazon
Andressa Monteiro Venturini (Piracicaba/Brazil)
P 80 The function and activity of microbial communities in subarctic soils
Sirja Viitamäki (Helsinki/Finland)
P 81 Exploring the culturable microbiome diversity and biotechnological potential in corals
Caren Vilela (Rio de Janeiro/Brazil)
P 82 Identification of key-players in anaerobic alkane oxidation in the diffuse venting Barite
Field at the Loki´s castle
Francesca Vulcano (Bergen/Norway)
28POSTER SESSION I I MONDAY, 27 MAY
Host-microbe interactions – ecology and evolution
P 83 RopB protein of the root nodule bacterium Rhizobium leguminosarum possesses
amyloid-forming properties
Mikhail Belousov (Saint Petersburg/Russia)
P 84 Interactions between the wasp Asobara japonica, its endosymbiont Wolbachia, and the
remainder of the microbiome
J. Falcão Salles (Groningen/The Netherlands)
P 85 Analysis of bacteria associated to the medicinal plant Origanum vulgare L.
Lara Mitia Castronovo (Sesto Fiorentino/Italy)
P 86 cancelled
P 87 Exploring the diversity of non-ribosomal peptide and polyketide synthases in rhizosphere
bacteria
Barak Dror (Rishon LeZion/Israel)
P 88 The cypsela (achene) of Echinacea purpurea (Asteraceae) as a diffusion unit of a
community of (micro)organisms?
Renato Fani (Sesto Fiorentino/Italy)
P 89 Root microbiome changes in response to salt marsh elevation
Diana Edisa Garcia Hernandez (Groningen/The Netherlands)
P 90 Lichen microbiomes across time and space
Martin Grube (Graz/Austria)
P 91 Exploring the prokaryotic community associated with the Rumen ciliate
protozoa population
Elie Jami (Rishon LeZion/Israel)
P 92 Predatory bacteria and their impact on the microbiome of C. elegans
Julia Johnke (Kiel/Germany)
P 93 Succession of intestinal microbiota of a Eurasian wigeon while spending a winter
Takehiko Kenzaka (Tondabayashi/Japan)
P 94 Host genetic selection for cold tolerance shapes microbiome composition and modulates
its response to temperature
Fotini Kokou (Be‘er Sheva/Israel)
29POSTER SESSION I I MONDAY, 27 MAY
P 95 cancelled
P 96 Fate and impact of the antibiotic Sulfametoxazole on soil microbial communities:
a spatial distribution problem
Jean M.F. Martins (Grenoble/France)
P 97 Colonization strategies of the dominant bacterium Enteroccus mundtii in the gut of host
larvae, Spodoptera littoralis
Tilottama Mazumdar (Jena/Germany)
P 98 Evolution-mediated priority effects in the assembly of gut microbiome and consequences
for host fitness
Shinjini Mukherjee (Leuven/Belgium)
P 99 Insights into plant factors driving rhizosphere establishment by Bacillus velezensis
Marc Ongena (Gembloux/Belgium)
P 100 Surface metabolome together with sea water temperature and trace metals contamination
shape the surface microbiote of the Mediterranean brown seaweed holobiont Taonia
atomaria
Benoît Paix (Toulon/France)
P 101 Chitin-degrading capacities of sponge and octocoral microbiomes
Rúben R. Silva (Lisbon/Portugal)
P 102 Cultivation dependent studies on the methylome and transcriptome of plant-growth
associated bacteria
Manuel Reisinger (Graz/Austria)
P 103 Influence of a high diversity of the microbial community on the persistence of Salmonella
enterica in agricultural soil
Jasper Schierstaedt (Braunschweig/Germany)
P 104 Wolbachia endosymbiont geographical distribution in the natural populations of the cotton
leafhopper, Amrasca devastans
Muhammad Shafiq (Lahore/Pakistan)
P 105 Constrained chaos in the pathobiome of a new slow-spreading coral disease
Michael Sweet (Derby/United Kingdom)
30POSTER SESSION I I MONDAY, 27 MAY
P 106 Plant root-microbiome responses to elevated CO2
Alla Usyskin-Tonne (Rishon LeZion/Israel)
P 107 Exploring reproductive microbiotas of a sexually promiscuous host
Liisa Veerus (Oxford/United Kingdom)
P 108 Exploring multi-domain probiotics and chemical remediation of oil-polluted marine waters
and their impacts on hydrocorals health
Helena Villela (Rio de Janeiro/Brazil)
P 109 Biodegrading two pesticide residues in rice crops and growth media by a genetically
engineered approach
Zhi Min Yang (Nanjing/China)
P 110 The functional repertoire encoded within the C. elegans microbiome
Johannes Zimmermann (Kiel/Germany)
Host-microbe interactions as driving forces of ecosystems
P 111 From head to toe – PGP Bacterial endophytes in three Mediterranean terrestrial orchid
species
Pasquale Alibrandi (Torino/Italy)
P 112 Beneficial microorganisms for Coral (BMC) Growth
Juliana Assis (Rio de Janeiro/Brazil)
P 113 Investigating ungulate-associated bacterial, plant and parasite communities on a common
landscape through comparative fecal pellet metabarcode analysis
William Holben (Missoula, Montana/United States)
P 114 Rhizospheric microbiome selection and enhanced activity associated to Agave
lechuguillaTorr. from the Chihuahuan desert
Guadalupe Medina-de la Rosa (San Luís Potosí/Mexico)
P 115 cancelled
P 116 cancelled
P 117 Competition between two holobionts – a multi-omic analysis of in situ coral-algal
interactions
Ty Roach (Waialua, Hawaii/United States)
31POSTER SESSION I I MONDAY, 27 MAY
P 118 Disentangling inter-kingdom and functional traits associated with pulse thermal resistance
in corals
Helena Villela (Rio de Janeiro/Brazil)
P 119 Uncovering virus-bacterial host interactions across ecological gradients in soil
Sungeun Lee (Ecully/France)
P 120 Identifying key components of microbial communities driving major changes in the
microbiome
Michael Sweet (Derby/United Kingdom)
P 121 Bacterial community composition change in temperate octocoral, Scleronephthya
gracillima exposed to heat stress
Seonock Woo (Busan/South Korea)
POSTER SESSION II I TUESDAY, 28 MAY
Microbiomes for sustainability – boosting agri- and aquaculture ecosystems
P 122 Harnessing the performance of the soil microbiome in agriculture
Fernando Andreote (Piracicab/Brazil)
P 123 The use of root endophytic bacteria to boost lettuce growth at low temperature conditions
Persyn Antoine (Ghent/Belgium)
P 124 Long-term agricultural management practices affect rhizosphere microbiota and plant
health
Jasper Schierstaedt (Braunschweig/Germany)
P 125 Does the agricultural management affect the priming capacity of barley rhizomicrobiota
against powdery mildew?
Nina Bziuk (Braunschweig/Germany)
P 126 Recovering soil quality in vegetable farming systems by reduced tillage and organic
fertilization and the effect on soil microbiome
María Victoria Cerecetto (Braunschweig/Germany)
P 127 cancelled
P 128 Integrating an evolutionary perspective to reveal the core microbiome of plant roots
Francisco Dini-Andreote (Wageningen/The Netherlands)
32POSTER SESSION II I TUESDAY, 28 MAY
P 129 Seasonal and spatial bacterial variability of the Lake Balaton
Milán Farkas (Gödöllő/Hungary)
P 130 The impact of microbial diversity loss on phosphorus availability to maize
Simone Raposo Cotta (Piracicaba/Brazil)
P 131 Metagenomic insights into bacterial succession during vermicomposting of the white
grape marc Vitis vinifera v. Albariño
María Gómez Brandón (Vigo/Spain)
P 132 Metabolic potential of Acidobacteria for carbon degradation in soils cultivated with
sugarcane fertilized with nitrogen and vinasse
Miriam Gonçalves de Chaves (Piracicaba/Brazil)
P 133 Biochar amendments affected composition and activity of the soil microbial community,
and the severity of common scab, a soil-borne disease of potatoes
Jan Kopecky (Prague/Czech Republic)
P 134 Effect of glycerol feed-supplementation on seabass (Dicentrarchus labrax) gut microbiota
Francisco Coelho (Aveiro/Portugal)
P 135 Humic acid modulates bacterioplankton and fish microbiome in a recirculating
aquaculture system (RAS)
António Louvado, Newton C. M. Gomes (Aveiro/Portugal)
P 136 Influence of pea genotype on root associated fluorescent pseudomonads, consequences
for plant iron nutrition
Tristan Lurthy (Dijon/France)
P 137 Microbial disruption of the signalling between Sorghum and the parasitic weed Striga
Raul Masteling (Wageningen/The Netherlands)
P 138 Nitrogen fixation of iron reducing bacteria in rice paddy soils – potent agents for
sustainable crop production with low nitrogen input
Yoko Masuda (Bunkyo-Ku/Japan)
P 139 Deliberate introduction of invisible invaders – impact of microbial inoculant to soil
microbial communities
Panji Cahya Mawarda (Groningen/The Netherlands)
P 140 Breeding for resistance in common bean drives distinct response to pathogen infection in
the root system
Lucas William Mendes (Piracicaba/Brazil)
33POSTER SESSION II I TUESDAY, 28 MAY
P 141 Comparative genomics reveals high genomic diversity in the drought-tolerant diazotroph
Susmita Das Nishu (Wonju/South Korea)
P 142 Microbial activity and community in long-term organic and conventional farming systems
Krista Peltoniemi (Helsinki/Finland)
P 143 Bioinoculants as modulators of rhizospheric microbiome
Shilpi Sharma (New Delhi/India)
P 144 Microbial ecology of Czech spa thermal springs
Tereza Šmrhová (Prague/Czech Republic)
P 145 Microbial inoculants as engineers of crop and soil microbiomes – an ecosystem service
approach
Ana Soares (Lisbon/Portugal)
P 146 Biological control of green mould disease of Agaricus bisporus by antagonistic Bacillus
spp. strains
Olja Stanojević (Belgrade/Serbia)
P 147 Valorization of solid wastes – improvement of soil properties
Hana Stiborova (Prague/Czech Republic)
P 148 Isolation of lactic acid bacteria with plant growth promotion activities from the
rhizosphere of wheat at different phenological phases
Carmine Crecchio (Bari/Italy)
P 149 The microbial ecology of disease suppression in alternative soils for mushroom cropping
systems
Tanvi Taparia (Wageningen/The Netherlands)
P 150 Microbiota of white button mushroom (Agaricus bisporus) compost production with
special emphasis on potential mycotoxin degrading bacteria
Fanni Tóth (Budapest/Hungary)
P 151 Effects of tillage or no-till on soil aggregates, enzymes, respiration and prokaryotic
community structure
Luis Wall (Bernal/Argentina)
P 152 Improvement of a polymeric carrier for efficient cowpea rhizobial formulations
Gustavo Xavier (Seropédica/Brazil)
34POSTER SESSION II I TUESDAY, 28 MAY
P 153 Influence of plant residues as a convergence factor on the rhizosphere core microbiome
of sugarcane and inoculated maize
Caio Augusto Yoshiura (Piracicaba/Brazil)
Microbiomes for sustainability – environmental pollution and bioremediation: current and
future challenges
P 154 Aerobic and oxygen-limited enrichment of BTEX-degrading biofilm bacteria – dominance
of Malikia versus Acidovorax species
Tibor Benedek (Gödöllő/Hungary)
P 155 Microbial bioremediation of aquifer affected from chloroethenes and petroleum
hydrocarbon contamination
Martina Bertolini (Milan/Italy)
P 156 Community shift of a mixed culture during benzene degradation under nitrate reduction
conditions
João Saraiva (Leipzig/Germany)
P 157 Compositions of enriched bacterial communities involved in the aerobic degradation of
BTEX and vinyl chloride from chlorinated solvent-contaminated groundwater
Alif Chebbi (Milan/Italy)
P 158 cancelled
P 159 The impact of bacteriophages in bacteria removal associated with soba stabilisation
station efficiency
Ayman Elshayeb (Khartoum/Sudan)
P 160 Characterization of phyllospheric bacterial communities hosted by Platanus x acerifoliain
European urban areas
Isabella Gandolfi (Milan/Italy)
P 161 Use of next-generation sequencing to characterize changes in water microbiota across an
urban watershed in San Juan Puerto Rico
Eduardo Lemuel-Tosado (San Juan/Puerto Rico)
P 162 Effect of mycorrhizal inoculation on the phytomanagement of polluted soil
Mikel Anza (Derio/Spain)
P 163 Alien pesticide-degrading bacteria challenged to remove micropollutants from drinking
water – physiological and ecological consequences of starvation
Benjamin Horemans (Leuven/Belgium)
35POSTER SESSION II I TUESDAY, 28 MAY
P 164 Bioremediation of metal-contaminated Doce River Hydrographic Basin based on microbial
biofilms
Diogo Jurelevicius (Rio de Janeiro/Brazil)
P 165 Microbial community structure and transformation of xenobiotics in Moscow Free Water
Surface Treatment Wetland
Sergey Kharitonov (Moscow/Russia)
P 166 cancelled
P 167 Development of group-specific nosZ primers for quantification of active high-affinity
nitrous oxide reducing organisms in complex environmental samples
Daniel D. Kim (Daejeon/South Korea)
P 168 cancelled
P 169 Purification of anaerobically digested livestock slurry with aim to reclaim nutrients and
water resource from digestates by bioleaching approaches
Jianru Liang (Nanjing/China)
P 170 Can secondary plant metabolites stimulate bacterial degradation of dioxins and furans?
Eglantina Lopez-Echartea (Prague/Czech Republic)
P 171 Application of nzvi and cheese whey to aquifer contaminated by chlorinated ethenes:
effect on autochthonous bacteria and remediation
Hana Macková (Liberec/Czech Republic)
P 172 Detection of functional genes involved in petroleum biodegradation
Adonilson Menezes Neto (Salvador/Brazil)
P 173 Evolution of bacterial populations in m-cresol-containing environment
Ingrem Metsik (Tartu/Estonia)
P 174 Soil loss prevention by rainfall through Microbially Induced Calcite Precipitation (MICP)
and its application on heavy metals-contaminated soil
Kyoungphile Nam (Seoul/South Korea)
P 175 Desulfurization of crude oil from bacteria isolated from palaeoenvironmental niche of
Greece
Georgia Ntroumpogianni (Athens/Greece)
36POSTER SESSION II I TUESDAY, 28 MAY
P 176 Biochemical characterization of two nitrilotiracetate monooxygenases from Gordonia
NB4-1Y thought to mediate the transformation of 6:2 fluorotelomer sulfonate to 6:2
fluorotelomer aldehyde
Garret O’Connell (Kamloops/Canada)
P 177 Effect of silicon on the biosorption and accumulation of chromium by arthrobacter
globiformis 151b type bacteria
Mariam Osepashvili (Tbilisi/Georgia)
P 178 Molecular and metagenomics investigations in oxidative vinyl chloride biodegradation
Ilaria Pietrini (San Donato Milanese/Italy)
P 179 Soil moisture-induced enhancement of soil N2O emission linked to distinct response of
nitrite-reducing and nitrous oxide-reducing microbial communities in acid paddy soil
Hongling Qin (Changsha/China)
P 180 Microbial community analysis of crude oil/gasoline mixture amended aerobic and hypoxic
enrichment cultures
Fruzsina Révész (Gödöllő/Hungary)
P 181 Optimization of the technology to improve the efficiency of microbial degradation of
chlorinated aliphatic hydrocarbons in contaminated groundwater
Csaba Romsics (Budapest/Hungary)
P 182 Soil and pharmaceuticals – what shapes microbial community composition in farming
lands?
Puspendu Sardar (České Budějovice/Czech Republic)
P 183 Mycotoxin degradation and antifungal activity against mycotoxigenic fungi by
Streptomyces
Hong-Gyu Song (Chuncheon/South Korea)
P 184 Catabolism of the common groundwater micropollutant 2,6-dicholorobenzamide (BAM)
in Aminobacter sp. MSH1 involves two plasmids and an unusual metabolic pathway
Dirk Springael (Heverlee/Belgium)
P 185 Hedera helix phyllobiome structure and (pan)genomic survey of bacterial isolates with
regard to phytoremediation of airborne pollutants
Vincent Stevens (Diepenbeek/Belgium)
P 186 Involvement of bacterial biphenyl dioxygenases in ortho-phenylphenol degradation
Jáchym Šuman (Prague/Czech Republic)
37POSTER SESSION II I TUESDAY, 28 MAY
P 187 Effects of long-term phytoremediation on rhizosphere and endophytic microbial
communities at high latitude
Ondřej Uhlík (Prague/Czech Republic)
P 188 Effects of the endocrine disruptor 17α-ethinylestradiol on bacterial community associated
with the scleractinean coral Mussismilia harttii
Caren Vilela (Rio de Janeiro/Brazil)
P 189 Synergism in lignocellulose degrading microbial consortia
Yanfang Wang (Groningen/The Netherlands)
P 190 Application of endophytic bacteria to reducing PAH contamination of plants
Xuezhu Zhu (Nanjing/China)
The wonders of secondary metabolism – from natural products to novel biocatalysts
P 191 Bioactive secondary metabolites from octocoral-associated microbes – new chances for
blue growth
Rodrigo Costa (Lisbon/Portugal)
P 192 Are biphenyl 2,3-dioxygenases involved in lignin degradation?
Magdalena Folkmanová (Prague/Czech Republic)
P 193 Identification of novel signaling molecules produced during the cocultivation of probiotic
strains and Clostridium difficile in in vitro setup
Thiyagarajan Gnanasekaran (Copenhagen/Denmark)
P 194 Interactions between Streptomyces rapamycinicus and Bacillus subtilis modulate
production of bioactive molecules
Tjaša Danevčič (Ljubljana/Slovenia)
P 195 The presence of Isopenicillin N synthase (IPNS) gene in Greek Streptomyces using new
designed primers and a microwave radiation DNA extraction technique
Vasiliki Makrygianni (Athens/Greece)
P 196 Attempts to induce present Non-Ribosomal Peptide Synthase (NRPS) genes in Greek
streptomycete strains
Christina Michalopoulou (Athens/Greece)
P 197 Evaluating of the metabolic versatility and biotechnological potential of the phenazine
biosynthesis gene cluster of Streptomyces sp. isolated from the Brazilian tropical dry
forest
Itamar Soares Melo (Jaguariúna/Brazil)
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