Vol.4 | Issue No.2 - NIRT
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11 January 2021 | Vol.4 |#02 NEWS BULLETIN A weekly publication from NIRT Library Union Health Minister Campaign brings out undetected TB asks Tamil Nadu CM to cases Abhinaya Harigovind focus on TB elimination KOCHI, JANUARY 10, 2021 23:10 IST CHENNAI, JANUARY 08, 2021 16:10 IST “We have asked some States that have the potential and capability to eliminate TB by 2025, five years ahead of the international goals. I hope Tamil Nadu could be one of those States,” Harsh Vardhan said on Friday. Union Health Minister Harsh Vardhan on Friday said that he had asked Chief Minister Edappadi K. Palaniswami to focus on the elimination of tuberculosis. Shortly after meeting the Chief Minister, Dr. Vardhan told reporters, “We have asked the Chief Minister to specifically focus a little more on TB elimination. We have asked some The State’s ‘catch-up’ campaign to detect tuberculosis cases States that have the potential and that may have gone undiagnosed during the COVID-19 capability to eliminate TB by 2025, five pandemic between June and August, screened over six lakh years ahead of the international goals. people, tested 29,166 and diagnosed 802 people with I hope Tamil Nadu could be one of tuberculosis (TB) between October and December 2020. those States and examples like this The dip in tuberculosis cases detected between June and can be showcased to the rest of the August 2020, when compared to figures in 2019, prompted the country. They can also emulate the Health Department to initiate a ‘catch-up’ campaign as part example of Tamil Nadu,” he said… of the Akshaya Keralam project. Continued in page no.2
“There was a 40%-50% dip in active TB cases sector for other ailments. As part of the STEPS between June and August,” said M. Sunilkumar, (System for TB Elimination in the private sector) State TB Officer. While 2,049 cases were programme, some patients were even directed to detected in August 2019, the figure fell to 1,213 private hospitals from government ones handling in August 2020. COVID-19,” he said He identifies two reasons for the fall of around Across the State, till the first week of December 1,500 cases in three months – people were afraid 2020, 174 TB patients were infected with COVID-19 to visit health centres with the coronavirus doing and 26 among them died. the rounds and lab technicians were afraid to handle sputum for sputum microscopy. People were even reluctant to cough keeping the COVID-19 stigma in mind, he added. Continued from page no.1 An analysis of the situation in August made the Union Health Minister asks Tamil Nadu CM to Health Department change tack. In 2018, a list of focus on TB elimination people vulnerable to TB was prepared in each panchayat. This vulnerability mapping exercise, …OVID-19 vaccine date not specified which identified 7.75 lakh people, proved useful The Union Health Minister, however, did not between October and December 2020, when specify when the COVID-19 vaccines would be ASHA workers reached out to them over phone rolled out. To a question on when the first batch of to identify and test people with symptoms. vaccines would be rolled out, he said all the preparations such as trial runs were happening as Vulnerable segments the vaccine has to ultimately be rolled out one Vulnerable populations include the elderly, day. “You will get to know as soon as the date is people with chronic conditions who might be decided,” he said. immunocompromised, smokers, and alcoholics. He said he had conveyed his appreciation [to the A hub-and-spoke model was set in motion for State] for providing exemplary services on the testing with samples being collected from homes, health front in particular. “Various facts that we taken to PHCs, and then a diagnostic centre. noticed including the performance of 100% RT- Medicines were delivered at homes. People who PCR tests, providing good quality facilities for showed symptoms like weight loss, cough, and treatment of patients even in the government fever but tested negative for COVID-19 were sector and also institutionalising post-COVID care tested for TB. “We tried molecular diagnostics, sequelae and research around that. I had come which is automated, over sputum microscopy. This to Tamil Nadu to oversee arrangements being improved case finding,” Dr. Sunilkumar said. made for impending vaccination against COVID- 19,” he said. Private hospitals Mirroring the situation across the State, in He noted that he inspected three vaccination Ernakulam, private hospitals diagnosed 25% more sites in the government and private sector, and cases in 2020 when compared to 2019, said P.S. central stores where the vaccines would be stored Rakesh, WHO consultant for TB elimination for for distribution to most of the southern States. Kerala and Lakshadweep. “There was a dip in diagnosis in the public sector since some hospitals “We also requested the CM for attention on the were converted into COVID-19 treatment facilities. health and wellness centres. Our aim is to create Patients may have depended on the private 1.5 lakh health and wellness centres focussing on
preventive, promotive and positive health in all The State recorded 724 fresh infections, eight of parts of the country by the end of 2022,” he said. which were detected among incoming passengers. Dr. Vardhan recalled that the Centre had sanctioned 11 new government medical colleges These included four international passengers — for the State. “In 2019, the Cabinet had decided two each from the U.A.E. and the U.S. Among to have 75 more medical colleges converted from domestic passengers, there were two from West district hospitals in the country. All 75 have been Bengal and one each from Odisha and Bihar, who decided, and 11 medical colleges were allotted arrived by surface transport, health officials said. to Tamil Nadu, and we laid the foundation stone for a few of them in the beginning of 2020. I have As on date, 7,164 persons are undergoing requested the Chief Minister to keep his treatment or are under isolation. The State’s tally commitment to the health sector at the highest touched 8,26,261. level,” he said. On Sunday, 857 persons were discharged after treatment, taking the total figure to 8,06,875. The State also recorded seven deaths. All the deceased had co-morbidities. Public health officials said of the approximately 2,300 passengers who travelled from the U.K., 20 districts see under 10 cases, between November 25 and December 23, last year, 2,146 have been traced and tested. Of them, even as State records 724 24 tested positive for COVID-19. Details of the CHENNAI, JANUARY 11, 2021 01:30 IST passengers include cross notification from/to other States. Tracing of other passengers is under Perambalur records no new case; seven more way, officials said. persons succumb to infection; 857 persons discharged after treatment According to the daily health bulletin released by the Directorate of Public Health, 208 fresh Twenty districts recorded under 10 COVID-19 infections and one death was recorded in cases in Tamil Nadu, while Perambalur saw none. Chennai district. A total of 240 persons were NIRT Library News Bulletin 3
discharged after treatment. As many as 2,182 This is the first international patent earned by the persons are currently undergoing treatment in the university. The award offers the promise of district. developing a new drug for cancer treatment. So far, 2,27,800 persons have been infected in the The patent comes as a culmination of almost 10 district. Its toll touched 4,045. years of research that began in 2010 with support from the Ministry of Earth Sciences. Coimbatore (1), Ramanathapuram (2), Thanjavur (2) and Tiruvallur (1) districts reported deaths. According to Prof. Sabu, FAS inhibitors are expected to be future drugs in cancer treatment. Four of the deceased had diabetes mellitus. One FAS is essential for fat metabolism, and its inhibition person had chronic liver disease and another had leads to the death of the cell. chronic liver disease. Phormidin has great potential in the treatment of Yet another person, whose death was recorded, obesity, diabetes, and tuberculosis. The new hope had a history of pulmonary tuberculosis and was for cancer treatment is that the drugs developed also suffering from chronic kidney disease. based on FAS inhibitor may have better properties with few side effects, Prof. Sabu pointed out. The State added one more private testing facility in Tiruvallur, taking the total number of testing centres to 180. As many as 63,794 persons were tested in the last 24 hours, officials said. Covid-19 vaccination drive: Healthcare workers’ database to be frozen tomorrow The nationwide vaccination of priority groups will Kannur varsity researchers get US begin January 16. In the initial phase, priority will patent KANNUR , JANUARY 07, 2021 02:08 IST New hope for cancer treatment A research team of the department of biotechnology and microbiology at Kannur University, comprising Prof. A. Sabu, M. Haridas, and Prasanth Shankar, has been awarded a US be given to an estimated 3 crore healthcare patent for the discovery of ‘Phormidin’ an inhibitor of the enzyme Fatty Acid Synthase (FAS). workers and frontline workers. NIRT Library News Bulletin 4
Health workers conducting mock vaccination drive at a by vaccine availability and won’t be “necessarily Covid-19 vaccination centre in New Delhi. (Express Photo: sequential,” the guidelines said. Praveen Khanna) Every eligible person for Covid vaccination needs The database of healthcare workers on the to be registered on Co-WIN and a mechanism has Centre’s CoWIN (Covid Vaccine Intelligence been created to mark out different priority groups. Work) app will be frozen on January 12 and that The Centre has said that the latest electoral rolls of frontline workers on January 25, the Union for Lok Sabha and Legislative Assembly elections Minister of Health and Family Welfare said. will be used to identify population aged 50 years or more. The health ministry has directed state health departments to ensure all vaccine beneficiaries, including healthcare and frontline workers are registered on the app. “We have repeatedly communicated that only pre-registered beneficiaries on Co Win will receive Covid 19 vaccine,” said Dr Mahesh Kumar Mass vaccination sites open in Aggarwal, Additional Commissioner-UIP, Ministry New York City as COVID-19 of Health and Family Welfare. batters U.S. That means those who do not register before the deadline will miss out on getting the jab in the The Brooklyn site is one of two mass vaccination initial phase of the Centre’s Covid-19 vaccination locations that opened in New York City on Sunday. drive The second one is located at Bathgate Contract “After the database for healthcare workers and Postal Station in the borough of the Bronx. frontline workers is frozen as per the timeline By: Reuters | New York | January 11, 2021 11:01:07 am addition of bene, no addition of beneficiaries on Co-Win will be permitted,” Dr Aggarwal added. The nationwide vaccination of priority groups will begin January 16. In the initial phase, priority will be given to an estimated 3 crore healthcare workers and frontline workers. Healthcare workers and frontline workers will be followed by those above 50 years of age and those under-50 with co-morbidities — these number around 27 crore, the Health Ministry said. More than 79 lakh potential vaccine recipients Sarah Gonzalez of New York, a Nurse Practitioner, gives have already been registered on the flagship Co- Claudia Zain, 47, of New York, her first dose of the COVID- WIN IT platform, which will provide real-time 19 vaccine at a New York Health and Hospitals vaccine information of vaccine stocks and will track clinic in the Brooklyn borough of New York Sunday, Jan. 10, individual recipients. 2021. The clinic, serving 30 people getting vaccines Sunday, will expand to a twenty-four hour, seven days a According to operational guidelines given to the week operation starting Monday. (AP Photo/Craig Ruttle) states, the prioritization of groups will depend on the “disease incidence and For Claudia Zain, a home healthcare aid in New prevailing pandemic situation.” Timing for the York City, getting the first shot of rollout in these three priority groups will be guided the coronavirus vaccine on Sunday felt like being NIRT Library News Bulletin 5
“a little part of history” that left her excited and aged below five years are stunted in terms of their height- hopeful for the future as the United States struggles for-age. (Illustration by C R Sasikumar) to contain the raging pandemic. More than 30 per cent children under the age of five years in Himachal Pradesh are stunted and “There’s so many emotions wrapped up in what’s more than 1/4th are underweight, according to happening right now and I’d like to be an the fifth National Family Health Survey (NFHS) inspiration for people who are wondering, ‘Can I released recently. The health of children in the do this? Should I do this?’,” said Zain, 47 after state has taken a turn for the worse in terms of all getting the shot at Brooklyn Army Terminal on a three crucial indicators of nutrition — stunting, frigid Sunday afternoon. “You should do it wasting (low weight for height) and underweight, because this is the way to move forward.” the survey has shown. The Brooklyn site is one of two mass vaccination Stunting is impaired growth and development in locations that opened in New York City on Sunday. children due to poor nutrition, repeated infection The second one is located at Bathgate Contract and inadequate opportunities to play and learn, Postal Station in the borough of the Bronx. according to the World Health Organization, and it can be prevented but not cured. The survey, conducted in 2019-20 in nearly 11,000 households in Himachal, found that 30.8 per cent children aged below five years are stunted in Over 30% kids under 5 yrs in terms of their height-for-age, i.e. their height is low in relation to their age as per WHO’s standards of Himachal stunted, more than normal child growth. 1/4th underweight: NFHS The proportion of stunted children is more in rural areas as compared to urban areas, and has The proportion of stunted children is more in rural increased by 4.5 per cent since the last such areas as compared to urban areas, and has survey held five years ago. increased by 4.5 per cent since the last such survey held five years ago. The WHO says that stunting in early life, particularly By: Express News Service | Shimla | Updated: December in the first 1,000 days from conception until the 23, 2020 9:08:54 pm age of two, has negative consequences for the child’s physical and mental development. Poor maternal nutrition and health, inadequate breastfeeding and infections are the main causes of stunting. Chamba HP’s worst-affected district The worst-affected district in Himachal is Chamba where 42.6 per cent children are stunted, followed by Bilaspur (40 per cent) and Kullu (36 per cent), the survey said. The survey, conducted in 2019-20 in nearly 11,000 Even in the least-affected district of Una, 25 per households in Himachal, found that 30.8 per cent children cent children are stunted. NIRT Library News Bulletin 6
Furthermore, a total of 25.5 per cent children in the Children aged 12-23 months are fully vaccinated: state are underweight and 17.4 per cent are 89.3% wasted, including 7 per cent who are severely Source: National Family Health Survey-5, 2019-20 wasted, according to the survey. Child wasting means a child is too thin for his/her height. Wasted children have an increased risk of death, the WHO says, but treatment is possible. Less than one-fifth children receiving adequate diet Dr Piyush Gautam, an associate professor at a medical college in Tanda, said that after attaining the age of six months, a child needs complimentary feed in addition to being breast- After Covid-19 test duty, fed. “Sometimes, this practice is neglected by GeneXpert machines revert to TB parents and the child continues to be only breast- fed, or there is a lack of adequate calories, testing proteins and nutrients in the diet. This results in Suraksha P, DHNS, Bengaluru, DEC 11 2020, 00:07 ISTUPDATED: DEC 11 2020, 00:54 malnutrition and wasting, which may further be aggravated by underlying infections such as tuberculosis and chronic diarrhea,” he added. The survey found that only 19 per cent children in Himachal aged 6 to 23 months are receiving an adequate diet. The situation is alarming in urban areas of the state, where only 14.4 per cent children are receiving an adequate diet, the survey said. With Covid-19 cases declining, the Tuberculosis Dr Gautam said that in children aged less than six (TB) wing of the Health department has been months, lack of breast-feeding or feeding diluted asked to utilise all theremaining CBNAAT cow milk is also a contributory factor towards cartridges available for Covid-19 testing and from malnutrition. The survey said that 70 per cent now on use the GeneXpert machines for testing TB children in the state aged under 6 months are samples as was done before the pandemic. exclusively breastfed. Child health and nutrition in Himachal The state resorted to using the machines for testing Covid samples when the pandemic began. So far, Children under 5 years are stunted: 30.8% 29,599 Covid samples have been tested using CBNAAT method. There are eight to nine Children under 5 years are wasted (low weight for government Covid testing labs that have height): 17.4 % GeneXpert machines in the state. Children under 5 years are underweight: 25.5% Dr Ramesh Reddy, joint director, TB, Health department, said, “Cartridges for GeneXpert Children aged 6-23 months are receiving machines are supplied by the Government of adequate diet: 19% India. We cannot procure them locally. Around NIRT Library News Bulletin 7
3,000 cartridges arrived two months ago. Further have tested 200 Covid samples with CBNAAT so supply will not come. We cannot do anything. We far. We could not use more than 400 cartridges are left with 500 cartridges to test Covid samples.” supplied more than two months back, because our GeneXpert machine was taken Rapid antigen/RTPCR away by the Health department for TB testing.” Now, the labs have to use rapid antigen method and RTPCR machines for Covid-19 tests. Eliminating TB “We have received guidelines that we have to use TrueNAT and CBNAAT machines to test TB samples as we have a goal to eliminate TB. If we use the machines for Covid testing, we cannot do TB testing. Even though Nimhans did not ask for People shouldn’t hesitate to get the cartridges, we gave it to them, to exhaust them. Active case finding is underway for TB and vaccinated, listen to scientists: door-to-door survey will be done.” Delhi’s 1st COVID patient The Belagavi Institute of Medical Sciences (BIMS) started CBNAAT testing on May 6 and has so far The massive drive, whose first phase will begin tested 286 Covid samples with the technology. from January 16 with healthcare workers to be the top priority group to receive the dose, will Quick tests for emergencies comprise 89 vaccination centres in Delhi. NEW DELHI, JANUARY 11, 2021 12:09 IST Dr Mahantesh Parande, HoD, microbiology, BIMS, told DH, “We use CBNAAT only in emergency Days ahead of the nationwide COVID-19 situations, because we have shortage of vaccination roll-out, the city’s first coronavirus cartridges. We last got 360 cartridges from the patient urged people on Monday to get Health department on November 10. The immunised without hesitation and listen to the advantage of using CBNAAT is, in cases of scientific community, and not get swayed in by emergency surgery, we can get the Covid test naysayers or those “spreading misconception” result in three hours, while RTPCR takes eight hours about it. for a cycle.” The massive drive, whose first phase will begin from While TrueNAT results come in one-and-a-half hour, January 16 with healthcare workers to be the top only four samples can be mounted at one go. The priority group to receive the dose, will comprise 89 GeneXpert system is available in a one, two, four, vaccination centres in Delhi. and 16-module configuration. With final preparations underway and the vaccine Gadag Institute of Medical Sciences (GIMS) set to arrive in the national capital in the next started CBNAAT testing on April 24. Dr Mahesh couple of days, Rohit Datta, who was the first Baragundi from GIMS said, “We tested 193 Covid person to be diagnosed with coronavirus infection samples with CBNAAT and then stopped, as on March 1, said “it feels surreal”. despite repeated requests, we were not supplied cartridges.” Dr Channamm... “Till a few months ago, we were struggling, people were dying in large numbers and fear of an Katti from the Vijayapura district hospital said, “We unknown virus was at its peak. But our doctors, NIRT Library News Bulletin 8
nurses and other healthcare workers fought a We have to trust the scientists. What other options tough battle in 2020. And the first dose is rightfully do we have,” said the 46-year-old, who has a son to be given to all those corona warriors,” he said. (12) and a daughter (8). Mr. Datta, 46, a businessman and resident of east “If there is trust deficit, no amount of ‘dawa’ or Delhi’s Mayur Vihar, praised the scientists who ‘dua’ will work,” he said. have worked tirelessly in labs to make these vaccines a reality. “When I had been detected Mr. Datta, who became quite spiritual after with COVID-19, a lot of lay people had sort of completing his 14-day isolation at Safdarjung become self-proclaimed medical experts, giving Hospital, argued that in Delhi, residents breath their opinions on the new virus, many spread “highly polluted air” but some people are getting misinformation and wrong information about it, uneasy about a vaccine and its efficacy. even though the scientific community was The fear among some people is about any struggling to understand this novel virus. Now, possible side effects of the vaccine, but Delhi same thing is happening about the COVID Health Minister Satyendar Jain has said that an vaccine too,” he said. “emergency room” will be there at all vaccination “Many are spreading misconceptions about it centres where the vaccinated person will be kept even before the roll-out. Let us give our scientists a under observation for 30 minutes. chance,” the leather businessman said. Among the 89 centres in Delhi, 40 will be India’s drugs regulator has approved Oxford government hospitals and 49 private facilities, Jain COVID-19 vaccine Covishield, manufactured by told reporters on Sunday. the Serum Institute, and the indigenously- Delhi recorded 399 fresh COVID-19 cases on developed Covaxin of Bharat Biotech for Sunday, the seventh time the daily incidence restricted emergency use in the country. count stood below the 500-mark in January, even “I would appeal to fellow citizens to not hesitate as the positivity rate dipped to 0.51%. and get vaccinated, whenever an opportunity The infection tally in the city stood at 6.3 lakh and presents itself. The Queen of England and her the death toll mounted to 10,678 with 12 new husband Prince Philip just got vaccinated, and fatalities. Indian leaders also should come to the forefront and lead the way, to instil confidence among Mr. Datta said he was waiting for his turn after the people,” Mr. Datta. priority groups are first vaccinated, but “I am ready to take the jab, whenever the government He cautioned that many “misconceptions” with tells us to get the vaccine”. no scientific basis are being spread about the vaccine by a section of lay people, including by A senior doctor at a Delhi government hospital, some religious leaders, and urged people to be which earlier was a fully COVID-19 facility, said wary of it and “not get swayed in by those human psyche tends to reject the unknown or unscientific arguments”. accept it with reluctance or be afraid of it. “Even introduction of polio vaccine had faced “People were afraid of the novel coronavirus and resistance by many in the beginning, but today, then accepted the new normal. Now, this we take our children to the booths for getting its vaccine is going to be administered for the first dose. When vaccine to treat small pox was made time, so there is a sense of unease among many. by Edward Jenner, he also had given it to his son. NIRT Library News Bulletin 9
But, why that fear, the vaccine’s efficacy we will China on January 14, Chinese authorities said on get to know about later, but it is not unsafe. I will Monday. be in the forefront to receive the jab,” he said. Lack of authorisation from Beijing had delayed the World leaders and doctors in countries like the U.S. arrival of the 10-strong team on a long-awaited and the U.K. have received the vaccine mission to investigate early infections, in what approved for emergency use in their countries. China’s foreign ministry called a “misunderstanding.” Mr. Datta, who was diagnosed with the infection much before the nationwide lockdown was The National Health Commission, which implemented from March 25, said it was strange announced the arrival date, delayed from its early that when the time for vaccination has come, bird January schedule, did not detail the team’s flu has hit many parts of the country, including itinerary, however. Delhi. China has been accused of a cover-up that Mr. Datta, whose house is near Sanjay Lake where delayed its initial response, allowing the virus to several ducks have been found dead, hopes 2021 spread since it first emerged in the central city of will be kinder to all creatures unlike the year gone Wuhan late in 2019. by, which saw a pandemic of the century after the Spanish Flu of 1918. The United States has called for a “transparent” WHO-led investigation and criticised its terms, “I did quarantine for 14 days at the hospital, and which allowed Chinese scientists to do the first then 14 days of home isolation, when these were phase of preliminary research. technical jargons. Now, these are household terns. Similarly, getting Covid vaccination will, I hope Ahead of the trip, Beijing has been seeking to become a routine affair like polio vaccine,” he shape the narrative about when and where the said. pandemic began, with senior diplomat Wang Yi saying “more and more studies” showed it emerged in multiple regions. While other countries continue to struggle with infection surges, China has aggressively doused flare-ups. Sunday’s 103 new cases were mainland China's China says WHO team to probe biggest daily increase in more than five months, as COVID-19 origins will arrive new infections rise in the province of Hebei, surrounding the capital, Beijing. January 14 Lack of authorisation from Beijing had delayed the arrival of the 10-strong team on a long-awaited mission to investigate early infections BEIJING, JANUARY 11, 2021 11:38 IST South Africa to store COVID-19 A World Health Organisation (WHO) team of vaccines from India at secret international experts tasked with investigating the origins of the COVID-19 pandemic will arrive in NIRT Library News Bulletin 10
Mr. Mkhize also allayed concerns that the vaccine place for fear of theft, black to be supplied by India had not yet been market sales approved by South African regulators. JOHANNESBURG, JANUARY 11, 2021 04:59 IST He said teams from the department of health as The South African government will store the 1.5 well as the South African Health Products million doses of the COVID-19 vaccine that it will Regulatory Authority (SAHPRA) were fine-tuning receive from India in the next few weeks at a and aligning all the regulations and processes to secret place because of the risk of theft for sale at ensure that there were no unnecessary delays or black market prices, according to a media report. impediments to rollout the vaccine. “The vaccines are a highly-rated commodity once they’re stolen and reach the black market,” “We are all happy that the Serum Institute of India Department of Health spokesperson Popo Maja and the AstraZeneca vaccine have already been told the weekly City Press on January 10, adding approved by various regulators and is being rolled that if this occurs, there is a risk that the prices of out in other countries,” he said. these illegally-obtained vaccines will be hiked significantly. Addressing concerns that corruption might make the process costly, as had been the case in the “There will be a central place where the provision of Personal Protective Equipment (PPE) consignment will be stored and from where we will to health workers for months during the COVID-19 distribute it to hospital and clinic pharmacies that lockdown, Mr. Mkhize gave an assurance that can store it,” Mr. Maja said. there would be no corruption as the deal was being done directly between the government “There’s a security issue too because countries and the manufacturer, unlike the middlemen which have already begun rolling out the used in the PPE acquisitions who had exploited the vaccines have warned us that there is a huge situation. theft of it, so we may not even disclose where it is being centrally stored,” Mr. Maja said. Health Minister Zweli Mkhize said during an address to the South African Parliament last week, that the government had secured 1.5 million doses of the AstraZeneca COVID-19 vaccine from India as South Africa battles exponentially rising infections and deaths daily amid a second wave of the Tuberculosis diagnosis by coronavirus and a new variant of the virus. metagenomic next-generation Overnight on January 10 there were over 21,600 sequencing on bronchoalveolar new infections and 399 more deaths. lavage fluid: A cross-sectional A million doses are expected from India before analysis the end of this month and a further 500,000 in February, with healthcare workers in both Liu X, Chen Y, Ouyang H, et al government and private facilities being prioritised International Journal of Infectious Diseases|January 5, 2021 for vaccination. NIRT Library News Bulletin 11
line medications or drugs, as well as to the set of medicines usually used to fight it. In the face of the epidemiological situation, this technology seeks to facilitate the detection of Peruvian scientists develop rapid Mycobacterium tuberculosis using a liquid culture kit in the standard MODS test. diagnostic kit for tuberculosis An improved kit For this presentation, transport conditions have been improved since the elements have been dehydrated to avoid low temperatures. In addition, the dispensing of antibiotics has been simplified, using new materials that are permeable to gas but impervious to liquids in order to achieve oxygen exchange without risk of contamination. According to the scientists, these features will make the diagnosis of tuberculosis accessible to more people, since the process will be simplified In order to solve one of the most recurrent health and the cost will be reduced given that the kit can problems in Peru, a team of national scientists has be stored at room temperature. been developing a kit for rapid diagnosis of tuberculosis, as well as of its resistance to various (END) NDP/HML/RMB/MVB | Published: 1/8/2021 drugs, using the Microscopic Observation Drug Susceptibility (MODS) test. The project was carried out by experts from Cayetano Heredia University (UPCH), with the support of the National Council for Science and Technological Innovation (Concytec) and the World Bank. A dangerous and contagious disease New imaging method reveals if According to the Pan American Health Organization (PAHO), tuberculosis (TB) is the antibiotics reach bacteria hiding leading infectious cause of death in the world. in tissues THE FRANCIS CRICK INSTITUTE | NEWS RELEASE 5-JAN-2021 Peru has 14% of tuberculosis cases in the Americas, with 1,457 of them being multidrug-resistant Researchers at the Francis Crick Institute and the tuberculosis and 121 extensively drug-resistant University of Western Australia have developed a tuberculosis. new imaging method to see where antibiotics have reached bacteria within tissues. The method These types of TB refer to cases in which the could be used to help develop more effective disease has mutated to become resistant to first- antibiotic treatments, reducing the risk of antibiotic resistance. NIRT Library News Bulletin 12
During bacterial infections like tuberculosis, They also found this antibiotic was collecting in bacteria enter human cells, which poses a macrophages and in polymorphonuclear cells, challenge for treatment, as antibiotics must reach both types of immune cell. This was a surprise as and enter all infected cells in order to be effective. these cells have different environments and it If researchers could select for or develop more wasn't thought that one antibiotic would be able effective antibiotics based on where they reach, to enter both. this may reduce the length of treatment needed, which in turn could reduce the risk of antibiotic Tony Fearns, author and senior laboratory resistance developing. research scientist in the Host-Pathogen Interactions in Tuberculosis Laboratory at the Crick, In their study, published in PLoS Biology the says: "Our approach could be used to help researchers developed a new imaging method to develop new antibiotics or to re-assess current see where in infected tissues and in cells an antibiotics to judge how effectively they reach antibiotic given to treat tuberculosis reaches the their targets. The more we learn about how drugs bacteria. The scientists are continuing to work on behave in the body, for example where they the method, adapting it for other types of collect, the better we will be able to treat antibiotic and to image multiple antibiotics at the bacterial diseases like tuberculosis." same time. So: https://www.eurekalert.org/pub_releases/2021-01/tfci- Max Gutierrez, author and group leader of the nim010521.php Host-Pathogen Interactions in Tuberculosis Laboratory at the Crick, says: "In the case of tuberculosis, people need to be treated with at least three different antibiotics over six months. We don't yet fully understand why this extended treatment is needed. We hope that being able to more clearly see where antibiotics are going, will help us better understand this process and find Covid makes matters worse for ways to improve it." TB patients Friday, 08 January 2021 | PNS | Lucknow To develop the imaging method, called CLEIMiT,* the researcher analysed lung tissue from mice A man sold the dry straw of the thatched roof of infected with tuberculosis and treated with the his house in a Banda village so that his father, who antibiotic bedaquiline. was suffering from TB, could get treatment, but to no avail as the patient died of the dreaded They combined a variety of imaging methods, including confocal laser scanning microscopy, 3D disease recently. The deceased belonged to Attara block in Banda district of Bundelkhand. fluorescence microscopy, electron microscopy and nanoscale secondary ion mass spectrometry, to develop their new approach. A patient with Covid-19 symptoms was brought to Ram Manohar Lohia Institute of Medical Sciences Using this method, they found that bedaquiline in Lucknow last week. He was also suffering from had not reached all infected cells in the lung tissue TB and his lungs were in a poor shape. He died and also had not entered all infected areas within within 24 hours of admission to the hospital. infected cells. NIRT Library News Bulletin 13
These are not solitary cases as TB and HIV patients having TB need to take more precautions during have been the prime victims during the unlock this period, he said. period. “TB is the leading killer and around 4.35 lakh Manohar and Rajkumar, two TB patients who died people die of this disease every year. On an on Sunday, belonged to Kuchbandiyas caste average, over 1,000 people die of TB, everyday,” (untouchables) and lived in Kherwa village in he pointed out. Banda. The villagers detest interacting with the Kuchbandiyas even under normal circumstance; Over 28 million cases of tuberculosis were there in the fear of coronavirus has added to their India before Covid-19 happened. Once people ostracisation. are diagnosed with TB, they are notified as being part of India’s National Tuberculosis Elimination Ramesh, son of Raj Kumar, said that they do not Programme. Protocol mandates that community have anything to eat. “My father had been eating health workers follow up on the notified patients, only once a day despite being a TB patient. I sold making sure that they consume their medicines the straw of our thatched roof so that I could get and show up for scheduled appointments at the medicines for my father, but that did not help,” he tuberculosis unit for health check-ups and to recalled. collect medicines. TB patients need nutritious food but during the But the lockdown has resulted in a significant Covid lockdown and subsequent unlock period, disruption of this system. Patients have been the supply chain snapped. “Go to any village of unable to travel to clinics. “We have asked TB Bundelkhand and you will find TB patients. They health workers not to compromise and conduct are dying because they are not getting food and tests for both TB and Covid. The primary symptom are also missing out on the medicines that they are of both the diseases is the same. In TB, the cough supposed to take regularly,” Raja Bhaiya of Vidya is accompanied by sputum while in case of Covid- Dham Samiti said. “Doctors are talking about 19, it is dry cough. Otherwise, both the patients corona but what about TB patients? Almost have fever. In case of Covid-19, the patients everyday, 4-5 people are dying of TB in villages,” develop bodyache which they cannot hide,” Dr he said. Suryakant pointed out. Incidentally, the government does not have any record as to how many people have died of TB from March 25 till date. “We are compiling the data,” a senior official, requesting anonymity, said. The government pays Rs 500 as sustenance allowance to TB patients and officials have no New peptide can target specific information regarding its impact. pathogen without damaging the Dr Suryakant, head of the department of good bacteria Respiratory Medicine at King George’s Medical University, said any person with compromised Reviewed by Emily Henderson, B.Sc.Jan 7 2021 lungs is vulnerable to coronavirus infection. People NIRT Library News Bulletin 14
Drug-resistant bacteria could lead to more deaths preventable and treatable, but drug-resistant TB is than cancer by 2050, according to a report an emerging threat that is on track to becoming commissioned by the United Kingdom in 2014 and a serious global health problem," Medina said. "It's jointly supported by the U.K. government and the a scary prospect." Wellcome Trust. In an effort to reduce the potential infection-caused 10 million deaths To develop a pathogen-specific antibacterial worldwide, Penn State researcher Scott Medina against TB, the researchers looked to the has developed a peptide, or small protein, that pathogen itself. The TB pathogen is wrapped in a can target a specific pathogen without thick envelope that is difficult to penetrate, damaging the good bacteria that bolsters the especially compared to other bacteria. immune system. "The envelope has pores, though -- channels Medina, an assistant professor of biomedical through which the pathogen takes in nutrients engineering, led the team who published its results and metabolites," Medina said. "We asked if we Jan. 4 in Nature Biomedical Engineering. could mimic these channels to design antibacterials that would create holes in the One of the best protective mechanisms we have bacterial envelope, and ultimately kill the to prevent infection are beneficial bacteria that pathogen." inhabit our bodies, known as commensals. For example, we often avoid food poisoning because The researchers made a peptide that seems to our guts are already populated by helpful disrupt the protective outer coating of the bacteria. There's no room for the pathogen to pathogen, making the TB bacteria susceptible to take hold and colonize. If you wipe out the good antibiotics and die, but it does not interact with bacteria, opportunistic pathogens can take the good bacteria. Medina said they are currently advantage and cause infections." studying the exact mechanism by which the peptide attacks the TB pathogen, but they Antibiotics can knock out an infection, but they suspect it has something to do with a fatty acid can also kill off good bacteria, creating an that lives on the pathogen's surface. opportunity for a potentially fatal secondary infection. Repeated exposure to antibiotics can "There aren't many biochemical differences also breed bacteria resistant to drugs. The between the targeted pathogen and good potential for secondary infection and drug- bacteria, except for this surface lipid," Medina said. resistant bacteria holds true for infections "We think the interaction of our peptide with this elsewhere in the body, too, according to Medina. fatty acid is one of the things driving this preferential interaction." Led by biomedical engineering doctoral student Andrew W. Simonson, first author on the paper, the He also pointed to the bacteria's thin team set out to develop a peptide that could carbohydrate region. In other types of bacteria, eradicate the pathogen that causes tuberculosis the carbohydrates form a thick defensive barrier (TB), one of the top 10 causes of death worldwide, that appears to insulate the bacteria against the without harming surrounding good bacteria. peptide. "There are great control strategies and treatments "It's not entirely clear why this works, but it's working in place for tuberculosis, making it largely on TB," Medina said. "There's a 10-fold NIRT Library News Bulletin 15
improvement on the effectiveness of antibiotics (pulmonary TB) but can also affect other parts of on this pathogen relative to the other good the body (extra-pulmonary TB). TB bacteria are bacteria." expelled in airborne fluid droplets when an infected person coughs, sneezes or exhales. Be Next, the researchers plan to investigate how to sure to teach your young ones to always cover administer the peptide to treat TB in a full model their mouths when they cough or sneeze, and to system. Peptides tend to break down when stay clear of children who may be sick. TB is also injected, Medina said, so his team is working to one of approximately 20 opportunistic infections develop an aerosol that would allow a person to that are associated with HIV. Extra-pulmonary TB is inhale the peptides directly to the infected lung an AIDS-defining illness. tissue. TB signs and symptoms "Once we understand why this peptide targets TB, TB symptoms include a persistent cough lasting and how to administer the peptide as a viable longer than two weeks that may (or may not) therapeutic, we can use this platform to design contain blood, unexplained weight loss, antibacterials toward other lung pathogens," drenching night sweats, loss of appetite, chest Medina said. pain, and tiredness. If anyone in your family has So: https://www.news-medical.net/news/20210107/New- these symptoms or anything similar to peptide-can-target-specific-pathogen-without- these, consult with your doctor immediately. damaging-the-good-bacteria.aspx Treatment options for childhood TB Treatment for TB consists of four drugs that are Childhood TB: Separating fact active against TB: At the initiation or intensive phase of treatment, four drugs (isoniazid, from fiction rifampicin, pyrazinamide, and ethambutol) are We explore childhood tuberculosis (TB) and the taken for the first two months. If the initiation phase signs and symptoms of this infectious disease. of treatment is successful the patient progresses to 6 days ago the continuation phase taking two drugs (isoniazid and rifampicin) for four months (or longer). The Would you believe us if we told you that South entire course of TB medication must be taken Africa is among the top five countries with the properly for the full length of time prescribed by highest TB incidence and prevalence? In 2010 the healthcare worker or the TB could become there were approximately 400, 000 – 590, 000 new drug-resistant. TB cases in South Africa. In 2010 there were approximately 25, 000 – 38,000 TB-related deaths New research on treating childhood TB in South Africa. The number of people in South “We can cure children with TB, but the challenge Africa living with HIV who also have TB is between is to make the treatment more child and family- 300, 000 and 350,000. With this in mind, it’s friendly by making the regimen shorter and giving therefore very important to learn about this illness children medication that is easy to swallow,” says in order to protect yourself, and your children from Prof Anneke Hesseling, director of the Desmond this disease. Tutu TB Centre at SU’s Faculty of Medicine and Health Sciences. What causes Tuberculosis? Tuberculosis is caused by Mycobacterium tuberculosis. TB mainly affects the lungs NIRT Library News Bulletin 16
The current treatment regimen for a child with drug-sensitive TB lasts six months, while treatment for multi-drug resistant TB can last between 12 and 18 months – including six months of daily injections during which the child is often hospitalised. “There are fewer actual TB organisms in a child with pulmonary (lung) TB and therefore fewer organisms to kill. So there is a real opportunity to shorten the treatment for drug-sensitive TB in children,” says Hesseling. Her research group is testing new treatment strategies to try and shorten the treatment regime income countries with the highest burdens. for drug-sensitive TB from six to four months for Patients often are tested for either of the two children with non-severe forms of this disease. This conditions, which have similar symptoms, such as trial will utilise a new child-friendly formulation that persistent fevers and coughs. However, co- combines all the TB drugs (fixed dose) in a small, infections often are missed. pleasant-tasting tablet that can be dissolved in water. Currently, adult-size tablets have to be Deep learning software, when used in diagnosis, halved, quartered, or crushed in order to could help address this challenge. With that in administer the correct doses to infants and mind, India is tapping into its strengths in children. information technology. So: https://risingsunchatsworth.co.za/169620/childhood- tb-separating-fact-from-fiction/ One example is the work of Mumbai- based Qure.ai, which specializes in deep learning algorithms to interpret radiology images and has developed Qxr, a chest X-ray screening tool built with deep learning to automate the interpretation of chest X-rays in less than a minute. India looks to AI to tackle TB, The Qxr tool classifies chest X-rays as normal or COVID-19 abnormal, identifies abnormal findings and January 8, 2021 highlights them on the X-ray image. It can be used By T.V. Padma as a point-of-care screening tool, followed by NEW DELHI – India, which has the highest bacteriological confirmation, to speed up TB incidence of tuberculosis (TB) in the world and the diagnosis from several weeks to a few hours, said second highest of COVID-19, is looking to artificial Qure.ai’s CEO and founder Prashant Warier. The intelligence (AI) to help detect and classify cases algorithm is trained to detect classical primary of both and lower the cost of diagnosis. pulmonary TB and simultaneously screen for chronic obstructive pulmonary disease, lung Lockdowns and fears of COVID-19 contagion malignancies in high-risk populations and some have led to a disruption in TB diagnosis and cardiac disorders. Qure.ai also has developed treatment services in the mostly low- to middle- Qscout, an AI-powered pandemic response app NIRT Library News Bulletin 17
built on the company’s experience on an app radiographs of 3,180 patients and found that “our used for global TB screening. AI models matched the radiologist’s performance in the diagnosis of COVID-19 from (chest X-rays) The potential of AI, especially deep learning, to and obtained sensitivity matching (that of) increase TB detection rates was discussed at the imaging experts,” Kharat said. annual conference of the International Union Against Tuberculosis and Lung Disease last Kharat added that unlike RT-PCR tests that give October. Over the past two years, organizations positive and negative results for COVID-19, AI tools such as PATH, FHI 360 (formerly Family Health help quantify the amount of lung tissue affected International), Philippines Business for Social by disease and correlate it with morbidity, aiding Progress and other programs funded by the U.S. in better decision-making related to treatment, Agency for International Development, TB REACH such as whether to admit a patient to a hospital. and The Global Fund have adopted Qxr technology, said Warier. AI screening of chest X-rays for COVID-19 and integrating with structured reporting “can be an Multiple studies conducted by the Stop TB excellent tool” to streamline workflow and hasten Partnership and the McGill International TB Centre report turnaround time, says Kharat. have found that Qxr outperformed other algorithms and resulted in cost benefits of The Deeptek study showed that AI screening of between 55% and 65%. chest X-rays sped up turnaround times and can be a useful prescreening tool. PATH, one of the early users of AI in TB, has worked with Qure.ai for almost two years. For instance, as Another company working on this space is part of an 11-month program in Maharashtra state, Hyderabad-based Docturnal Pvt. Ltd., which Qxr TB was used to screen more than 9,000 people developed TimBre, a screening app for lung TB and led to a 20% increase in notifications, a 13% that has been used across 25 pilot studies on 5,000 increase in case detections and a 50% rise in cases subjects, said founder Rahul Pathri. The company confirmed by microbiological culture tests. developed the Covawe algorithm for COVID-19 that was used from May to July 2020 to screen Another company, Pune-based Deeptek Medical 2,000 people at home. The model showed 77% Imaging Pvt. Ltd. has screened about 100,000 sensitivity and 86% specificity. people for TB using AI under an ongoing project to free Chennai and its population of 7 million from “We now plan for a bi-directional screening the disease using mobile diagnostic vans and an mechanism with a single cough sample screening AI-based tool to screen for underlying chest for both TB and COVID-19 in one go,” said Pathri. disease and generate a radiology report. The tool helped evaluate chest X-rays and classify them And AI-based tools can be affordable. For into patients likely or unlikely to have TB, Deeptek example, a single screening using TimBre costs founder Amit Kharat told BioWorld. INR50 (US$0.68) per screening, excluding hardware filters or surgical masks. “Covawe is free “The diagnosis time is drastically reduced,” Kharat for now, and we plan to charge INR25 per screen said. AI facilitates accurate, instant diagnosis, post clinical trials,” Pathri said. eliminating the need for a detailed report from So: https://www.bioworld.com/articles/502207-india-looks- radiologists. to-ai-to-tackle-tb-covid-19 Deeptek had carried out a retrospective study in Nanavati Hospital, Mumbai, on 9,098 chest NIRT Library News Bulletin 18
cancer (13.3% of all cancer diagnoses) in 2020. This is followed by colorectal (341,000, 12.7%), prostate (336,000, 12.5%) and lung cancer (318,000, 11.9%). What are the benefits of AI in As the European population expands and the radiology and how can it be proportion of older patients grows, the number of breast and lung cancer cases is rising implemented? correspondingly. With the current shortage of 8th January 2021 radiologists in Europe expected to continue in the future, this profession is facing multiple challenges, the largest of which is time. At any given time in the UK, there are an estimated 330,000 X-rays which have been waiting more than 30 days for a report. In many European countries, a double reading process is necessary and in southern European countries chest X-rays and mammograms still need to be printed. Lunit is a medical AI software company devoted © iStock-sefa ozel to developing advanced medical image analytics and data-driven imaging biomarkers through cutting-edge deep learning technology. Artificial Intelligence (AI) technology offers time Lunit’s mission is to provide AI solutions in order to savings, improved performance, case rating by open a new era of data-driven precision prioritisation and earlier detection of cancers. medicine, with the aim of solving the most critical issues in cancer care today: offer healthcare Between 1960 and 2020, the population of the EU systems a stronger time efficiency, reducing grew from 354.5 million to 447.7 million, an increase medical costs and prolonging patient survival. of 93.2 million people. On 1 January 2020, the total population of the EU’s 27 Member States was Lunit INSIGHT MMG estimated to be 0.9 million more than the previous Lunit INSIGHT MMG assists both breast specialists year, showing a growth of 0.26%. With the current and general, non-specialist radiologists by population growth and the increase in life increasing the cancer detection rate and expectancy worldwide, the share of people aged decreasing the rate of false positives when 80 years or above within the total population of interpreting screening mammograms. Studies the EU is projected to grow 250% between 2019 show the software has an accuracy of 96% and and 2100, bringing the total proportional elderly significantly improves the interpretive capabilities population from 5.8% to 14.6%. This growth is of radiologists by up to 10%. expected to result in a corresponding exponential rise in cancer diagnoses. Implementing AI in the analysis of mammogram images could help reduce false positive and false Female breast cancer is the most commonly negative recalls and successfully triage up to 60% diagnosed cancer in Europe, with over 355,000 of all cases without human interpretation, women in the EU diagnosed with breast NIRT Library News Bulletin 19
reducing the reading workload by more than half. Lunit INSIGHT CXR In addition, INSIGHT MMG improves diagnostic Diving into chest X-rays, Lunit INSIGHT CXR supports accuracy of mammograms for dense and fatty radiologists with difficult cases of chest breasts by up to 9% and 22% respectively. abnormalities, helping them minimise the risk of missed cases. Studies show that this AI-supported NIRT Library News Bulletin 20
technology has an accuracy of 97% to 99% and Lunit offers all healthcare professionals interested increases workflow efficiency through decreasing in this topic, free webinars and sessions to learn the total report reading time by 34%. INSIGHT CXR and discuss how AI should be implemented automatically generates a case report which properly and how it can support HCPs. includes an analysis of each radiologic finding and its location information. Radiologists can To learn more about Lunit’s AI solutions and try our customise detectable findings and their FREE demo, go to https://insight.lunit.io/ visualisation methods according to the user’s So: https://www.healtheuropa.eu/what-are-the-benefits- clinical environment. of-ai-in-radiology-and-how-can-it-be- implemented/104791/ Lunit Insight CXR detects nodules, atelectasis, cardiomegaly, fibrosis, calcification, consolidation, mediastinal widening, pleural effusion, pneumoperitoneum, and pneumothorax. It also supports with tuberculosis screening. Lunit Insight CXR detects nodules, atelectasis, cardiomegaly, fibrosis, calcification, consolidation, mediastinal widening, pleural effusion, pneumoperitoneum, and pneumothorax. It also supports with tuberculosis screening. Education in AI In reference to the abnormality scores on the worklist, radiologists can prioritise exams in their reading order, resulting in a 65% reduction in reading time for normal cases and a 25% reduction for abnormal cases. The AI-aided, automatic detection of small, subtle pulmonary nodules, especially during regular checkups, enables radiologists to reduce false negative cases and detect lung cancer at early stages. Many radiologists are aware of the potential offered by Artificial Intelligence (AI), as it has been a popular concept in recent years and has made many appearances in different congresses. Nonetheless, based on the results of a study published recently in the Academic Radiology journal, the knowledge gap remains an obstacle to AI implementation. 39.8% of radiologists who participated in the survey said they have no understanding of AI, while 30% reported that they were familiar with the basics. Therefore, education will be key in the implementation of AI. NIRT Library News Bulletin 21
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