PHD PROGRAMME IN AGRICULTURE, FOOD AND ENVIRONMENT - UUNNIIVVEERRSSIITTÀÀ DDII PPIISSAA - UNIPI

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PHD PROGRAMME IN AGRICULTURE, FOOD AND ENVIRONMENT - UUNNIIVVEERRSSIITTÀÀ DDII PPIISSAA - UNIPI
UNIVERSITÀ DI PISA

PhD programme in
 Agriculture, Food
 and Environment
PHD PROGRAMME IN AGRICULTURE, FOOD AND ENVIRONMENT - UUNNIIVVEERRSSIITTÀÀ DDII PPIISSAA - UNIPI
PhD programme in Agriculture, Food and Environment
Department of Agriculture, Food and Environment
University of Pisa

Postal address:
Via del Borghetto 80, 56124 Pisa
Italy

Internet: http://www.agr.unipi.it/phd-programme-in-agriculture-food-and-environment-3/

Compilation & Final editing: A. Pardossi, A. Cavallini (University of Pisa)
Design: B. Sereni (University of Pisa)

January 2019

The information contained in this brochure is subject to change
PHD PROGRAMME IN AGRICULTURE, FOOD AND ENVIRONMENT - UUNNIIVVEERRSSIITTÀÀ DDII PPIISSAA - UNIPI
The University of Pisa (UNIPI) is one of the most important universities in Italy and has a
long tradition of excellence in terms of education and scientific research. The Department
of Agriculture, Food and Environment (DAFE) is dedicated to research at the frontiers of
agricultural, food and agro-environmental sciences. The Director of DAFE is currently Prof.
Alberto Pardossi (alberto.pardossi@unipi.it) and the teaching staff consists of nearly 70
professors and researchers.

The PhD programme in Agriculture, Food and Environment is a three-year post-graduate
research course at DAFE. The official language of the PhD course is English. The
Coordinator of the PhD programme is currently Prof. Andrea Cavallini
(andrea.cavallini@unipi.it). The Phd programme has as central theme 'Food sustainability'.
Its scope is articulated around three main areas: 1) biological basis of food sustainability;
2) sustainability of food production systems; 3) food quality and safety.

The course aims at training researchers with an up-to-date, excellent disciplinary ground
and with a deep understanding of the systemic implications of their specific field of activity
and awareness of the importance of mutual learning with enterprises, administrations and
civil society. The PhD programme encourages the development of a common systemic
approach through its training program, which will be centered upon the principles of
sustainability science, and through its partnership strategy. In this sense, specific
agreements with external institutions and/or with some firms are established for specific
research themes, with double (university and external institution) supervision. After
graduation, the PhD student is expected to be a highly qualified and skilful researcher in
the field of basic or applied research. The job placement of PhD graduates is in public or
private research centres in the sectors of agriculture, food industry and environment.

At present, the Doctorate Board includes 21 professors at the University of Pisa and 3
senior scientists at various research institutes in Italy or abroad. Currently, 36 graduate
students are attending the course or are waiting for the final examination; ten students
come from foreign universities.
PHD PROGRAMME IN AGRICULTURE, FOOD AND ENVIRONMENT - UUNNIIVVEERRSSIITTÀÀ DDII PPIISSAA - UNIPI
Doctorate Board
     SURNAME & NAME               INSTITUTION          QUALIFICATION                EMAIL                         RESEARCH INTERESTS
1. ANGELINI, Gabriella                                                                                    Agronomy; crop production and
                                     UNIPI             Full Professor     luciana.angelini@unipi.it
   Luciana                                                                                                quality of food and non-food species
2. ARDUINI, Iduna                    UNIPI              Researcher          iduna.arduini@unipi.it        Botany applied to agro-ecosystems
                                                                                                          Agricultural economics; bioeconomy;
3. BARTOLINI, Fabio                  UNIPI              Researcher          fabio.bartolini@unipi.it
                                                                                                          modelling farmer behaviour
                                                                                                          Agricultural economics; bioeconomy;
4. BRUNORI, Gianluca                 UNIPI             Full Professor     gianluca.brunori@unipi.it
                                                                                                          agricultural and food policy
                                                                                                          Integrated pest management; insect
5. CANALE, Angelo                    UNIPI              Researcher         angelo.canale@unipi.it
                                                                                                          behaviour
6. CAVALLINI, Andrea                 UNIPI             Full Professor     andrea.cavallini@unipi.it       Plant genetics and genomics
                             Swiss Federal Institute
                                                          Senior                                          Tree physiology; silviculture and forest
7. CHERUBINI, Paolo           for Forest, Snow and                         paolo.cherubini@wsl.ch
                                                        Researcher                                        ecology
                             Landscape Research
                                                                                                          Soil microbiology; mycorrhizal
8. GIOVANNETTI, Manuela              UNIPI             Full Professor   manuela.giovannetti@unipi.it      symbioses; rhizosphere beneficial
                                                                                                          bacteria
                                                                                                          Physiology and management of fruit
9. GUCCI, Riccardo                   UNIPI             Full Professor      riccardo.gucci@unipi.it
                                                                                                          trees; olive trees; oil quality
10. GUGLIELMINETTI,
                                     UNIPI              Researcher      lorenzo.guglielminetti@unipi.it   Plant physiology; plant proteomics
    Lorenzo
                                                                                                          Agricultural economics; institutional
                                                          Senior
11. LOCONTO, Allison-Marie      INRA (France)                           allison-marie.loconto@inra.fr     innovations in conformity assessment
                                                        Researcher
                                                                                                          systems
12. LUCCHI, Andrea                   UNIPI             Ass. Professor       andrea.lucchi@unipi.it        Integrate pest management
PHD PROGRAMME IN AGRICULTURE, FOOD AND ENVIRONMENT - UUNNIIVVEERRSSIITTÀÀ DDII PPIISSAA - UNIPI
13. MASSAI, Rossano        UNIPI   Full Professor      rossano.massai@unipi.it       Management of fruit crops; fruit quality
                                                                                     Agronomy; crop production and
14. MAZZONCINI, Marco      UNIPI   Full Professor    marco.mazzoncini@unipi.it
                                                                                     organic agriculture
                                                                                     Lipid metabolism in ruminants; rumen
                                     Associate
15. MELE, Marcello         UNIPI                       marcello.mele@unipi.it        fermentation and methane emission;
                                     Professor
                                                                                     milk and meat quality.
                                     Associate                                       Air pollution and global change; tree
16. NALI, Cristina         UNIPI                         cristina.nali@unipi.it
                                     Professor                                       hazard assessment
                                                                                     Greenhouse and nursery
17. PARDOSSI, Alberto      UNIPI   Full Professor     alberto.pardossi@unipi.it
                                                                                     management; hydroponic technology
                                      Senior                                         Trace elements in the soil-plant
18. PEZZAROSSA, Beatrice   CNR                      beatrice.pezzarossa@ise.cnr.it
                                    Researcher                                       system; soil quality
                                                                                     Plant physiology; herbs and officinal
19. PISTELLI, Laura        UNIPI    Researcher          laura.pistelli@unipi.it
                                                                                     plants
                                                                                     Machines for soil tillage, conservation
                                     Associate
20. RAFFAELLI, Michele     UNIPI                       michele.raffaelli@unipi.it    and no tillage, physical weed control,
                                     Professor
                                                                                     soil disinfection with physical methods
                                                                                     Food quality, plant stress physiology
21. RANIERI, Annamaria     UNIPI   Full Professor    anna.maria.ranieri@unipi.it
                                                                                     and biochemistry
22. SERRA, Andrea          UNIPI    Researcher          andrea.serra@unipi.it        Animal food production and quality
                                                                                     Fungal plant pathogens; biocontrol of
23. VANNACCI, Giovanni     UNIPI   Full Professor     giovanni.vannacci@unipi.it
                                                                                     plant diseases; Mycology
                                     Associate
24. ZINNAI, Angela         UNIPI                        angela.zinnai@unipi.it       Food technology
                                     Professor
PHD PROGRAMME IN AGRICULTURE, FOOD AND ENVIRONMENT - UUNNIIVVEERRSSIITTÀÀ DDII PPIISSAA - UNIPI
Programme overview

The PhD programme essentially consists in conducting an original research work under
supervision and writing a dissertation (thesis) concerning the following topics:
    -   food science and technology;
    -   genomics, proteomics and metabolomics of species of agricultural interest;
    -   multifunctional agriculture;
    -   plant and animal production systems, even in urban environment;
    -   plant physiology, ecology and biochemistry;
    -   plant, animal and microbial biotechnologies;
    -   technologies for plant and soil protection and environmental bioremediation.

Each PhD student is supported by a supervisor at DAFE. The PhD students also supervise
MSc students and participate in educational activities such as courses, seminars, summer
schools and congresses organized by the University of Pisa or other institutions in Italy or
abroad, following a tailor-made training plan aimed at achieving in-depth knowledge of
specific scientific issues and improving general skills.

The courses and seminars organized in 2019 for all PhD students are the following:
     Course ―Scientific English‖. January-March 2019. Organized by University of Pisa.
       Course ―Fundamentals of Statistics for Agricultural Research‖. March-April 2019.
        Lecturers: Dr. G. Conte (Univ. of Pisa); Prof. N. Macciotta (Univ. of Sassari).
       Course ―Publishing in International Scientific Journals‖. June 2019. Lecturer: Dr. G.
        Benelli (Univ. of Pisa).
Students generally attend other courses, seminars and scientific meetings organized by
DAFE. The detailed programme of teaching activities for each year is generally published
at the end of February.

At the end of each year, each PhD student holds a public seminar and prepares a report
on his/her academic and research activities, which must evaluated and approved by the
Doctorate Board.
All the PhD students are invited to spend at least six months in renowned research
institutes abroad during the second and/or third year of the course.

At the end of the course, the thesis (in English) is preliminary evaluated by two external
referees belonging to other Universities in Italy or abroad.
Finally, the PhD degree is awarded after a public examination in the form of defence of the
dissertation before an external committee, which is appointed by the Doctorate Board.

Each candidate must publish at least one scientific paper in an indexed journal (ISI–Web
of Knowledge) before graduation.
PHD PROGRAMME IN AGRICULTURE, FOOD AND ENVIRONMENT - UUNNIIVVEERRSSIITTÀÀ DDII PPIISSAA - UNIPI
A list of current PhD projects is reported below.

Current PhD projects
                                                                                  SUPERVISOR
            CANDIDATE                YEAR           THESIS SUBJECT
                                                                                  [OPPONENT]
1. ABOU CHEHADE, Lara                3+     Performance of field
                                            vegetable cropping systems          M. Mazzoncini,
                                            under organic farming: effects         D. Antichi
                                            of tillage, cover cropping and        [A. Peruzzi]
                                            weed management.

                                            Effects of biochar on                  R. Cardelli
2. BECAGLI, Michelangelo              1     chemical and biological              [A. Pardossi,
                                            properties in soil plant system     M. Mazzoncini]
                                            Future Mediterranean                  E. Pellegrini,
                                            scenario: will the
3. CALZONE, Antonella                 2                                           B.E. Maserti
                                            pomegranate be a crop
                                            species?                             [D. Remorini]

                                            Wild plants, a better
                                            alternative to common
                                            vegetables and their
                                                                              A. Pardossi, L. Guidi
4. CECCANTI, Costanza                 2     nutritional and toxic
                                                                                 [L. Angelini]
                                            properties as ready-prepared
                                            fresh salads and V gamma
                                            vegetables

                                            Evaluation of heavy metal          L. Guglielminetti,
                                            decontamination                         L. Pistelli
5. CHIELLINI, Carolina                1
                                            performances in algae and            [A. Scartazza,
                                            plants                                  A. Ciurli]
                                            The Impact of International
                                            Migration on Agriculture,
                                            Food and Rural Development
                                                                                   F. Bartolini
6. CHINEDU TEMPLE, Obi                2     of Home and Host
                                                                                  [G. Brunori]
                                            Communities: Evidence from
                                            Nigerian Migrants in Italy and
                                            Belgium
                                            Productive and metabolic
                                            response of Maremmana and          A. Serra, M. Mele
7. CIUCCI, Francesca                  3
                                            Aubrac steers maintained in           [T. Giordani]
                                            feedlot or grazing systems
                                            Plant to plant and plant to soil
8. ESNARRIAGA NAIMID DEL
                                      2     interactions in intercrops and I. Arduini [M. Mariotti]
   VALLE, Dayana
                                            mixed crops
The novel food regulation in
                                                                         A. Di Lauro
9. GIOVANNETTI, Alessandra   2    the European and
                                                                        [G. Strambi]
                                  international context
                                  Molecular and functional             M. Giovannetti,
                                  diversity of beneficial
10. GIOVANNINI, Luca         1                                            A. Turrini
                                  microorganisms associated
                                  with the mycorrhizosphere              [C. Sbrana]

                                  Limiting and enabling factors
                                  in transdisciplinary research:
                                  The example of Living Labs         G. Brunori, D. Maye
11. KOBZEVA, Marina          1
                                  for rural-urban relations in the     [P. Prosperi]
                                  EU-funded research project
                                  ROBUST
                                  Photo-oxidative stress in
                                  young and senescent leaves
                                                                         D. Remorini
12. LO PICCOLO, Ermes        3    characterized by the
                                                                          [L. Guidi]
                                  presence or not of
                                  anthocyanins
                                  The valorization of olive oils
                                  through innovation and                  A. Zinnai
                                  optimization of packaging and
13. MACALUSO, Monica         1                                        [M.F. Quartacci,
                                  storage conditions adopted in
                                  order to increase the olive            F. Venturi]
                                  growing sustainability
                                  UV radiation and leaf-root
                                  communication in fungal              M.F. Quartacci
14. MANNUCCI, Alessia        2
                                  pathogen resistance and             [L. Guglielminetti]
                                  fortification of food plants
                                  Characterization and isolation
                                  of genes and proteins                 E. Pellegrini,
15. MARCHICA, Alessandra     2    involved in abiotic stress             R. Bernardi
                                  response in sage (Salvia                [L. Guidi]
                                  officinalis L.)
                                  Edible flowers as new source            L. Pistelli
16. MARCHIONI, Ilaria        2
                                  of nutraceutical foods                [A. Pardossi]
17. MATTIONI, Dalia          3+   The impact of food
                                  provisioning environments on           G. Brunori
                                  nutrition: the contribution of        [F. Di Iacovo]
                                  local food systems
18. MOLES, Tommaso Michele   3+   Characterization of landrace        L. Guglielminetti,
                                  genotypes of Solanum                  P. Picciarelli
                                  lycopersicum
                                                                       [A. Scartazza]
                                  Interactive innovation in
19. MOLINA, Natalia          1                                       G. Brunori [F. Galli]
                                  agriculture
The role of multifunctionality
                                                                          G. Brunori
20. ORLANDO, Jacopo Gabriele   3    principle into social
                                                                          [M. Rovai]
                                    responsibility initiatives

                                    Soil water availability effects      C. D‘Onofrio,
21. PALAI, Giacomo             1    on yield and fruit quality in         G. Caruso
                                    fruit trees and grapevine          [S.D. Castellarin]
                                    Small farms, small food
                                                                          G. Brunori
22. PALMIOLI, Lucia            3    businesses and sustainable
                                                                        [F. Di Iacovo]
                                    food security
23. PIERRO, Roberto            3+   Symptom severity and
                                    multilocus sequence typing
                                                                         A. Materazzi
                                    analysis of Bois Noir
                                                                          [D. Rizzo]
                                    phytoplasma strains in
                                    Tuscan vineyards
24. PIRCHIO, Michel            3+   Development of innovative
                                    machines and application of         M. Fontanelli,
                                    precision farming instruments        M. Volterrani
                                    for turf grass management            [A. Peruzzi]
                                    and turf quality control.
25. PISUTTU, Claudia           1    How to counteract the
                                    Ailanthus altissima invasion:
                                                                         G. Lorenzini
                                    could Verticillium have a role
                                                                         [R. Bernardi]
                                    in the biological control of the
                                    “Tree of Heaven”?
26. PUIG SIRERA, Angela        2    Agro-hydrological and
                                    spectral models to improve
                                    the accuracy of monitoring             G. Rallo
                                    water status and irrigation         [D. Intrigliolo]
                                    efficiency in Mediterranean
                                    arboreal crops
27. PURNAWAN, Endar            2    Development of Small Food
                                    Business in the Kawasan
                                                                          G. Brunori
                                    Mandiri Pangan (KMP)
                                                                          [A. Rossi]
                                    Program in Border Area in
                                    Indonesia
28. RABELO LANZA, Marya        1    Multitemporal analysis of land
Cristina                            use and land cover changes
                                    in Mediterranean area by              N. Silvestri
                                    integrating information from        [T. Sabbatini]
                                    European data-bases, remote
                                    sensing and local surveys
29. RICCIARDI, Renato          3    Semio-chemical and benificial
                                                                           A. Lucchi
                                    insects for biological control
                                                                           [B. Conti]
                                    of pests in vineyards
30. DA ROCHA O. TEIXEIRA,   2   The role of small farmers on
                                                                        G. Brunori
    Raiza                       nutrition security: a gender-
                                                                         [F. Galli]
                                sensitive analysis
                                Innovative strategies and              C. Frasconi,
                                machines to manage weeds
31. SPORTELLI, Mino         1                                         M. Volterrani
                                in urban environment and in
                                conservation agriculture              [M. Fontanelli]

                                Innovative technologies for
                                the production and
                                                                   A. Zinnai, F. Venturi
32. TAGLIERI, Isabella      2   preservation of natural
                                                                    [M.F. Quartacci]
                                leavening products with high
                                nutraceutical content
33. USAI, Gabriele          3   Structural genomics for plant           L. Natali,
                                breeding: the fig (Ficus carica
                                                                       F. Mascagni
                                L.), an ancient crop with
                                promising perspectives                 [A. Zuccolo]

                                ASTER-REP, a database of
                                                                       F. Mascagni
34. VENTIMIGLIA, Maria      1   Asteraceae transposable
                                                                       [A. Zuccolo]
                                sequences
                                Application of CRISPR-Cas9            G. Vannacci,
                                technology to produce mutant
35. VICENTE MUNOZ, Isabel   3                                          S. Sarrocco
                                fungal strains for biocontrol of
                                crop plant diseases                   [T. Giordani]

                                Application of genome editing          T. Giordani,
                                in Lactuca sativa L. to                C. Pugliesi
36. VIVIANI, Ambra          1
                                increase Ascorbic Acid                  [L. Pistelli,
                                content in leaves                      M. Fambrini
Recent (2016-2018) PhD dissertations
            STUDENT          YEAR                 TITLE                   SUPERVISOR

                                    Assessment of the impact of
ARCURI, Sabrina              2018   global drivers of change on            G. Brunori
                                    Europe's food security
                                    The production of nutraceutical
                                    compounds in food plants as
BATTINI, Fabio               2017   affected by mycorrhizal               M. Agnolucci
                                    symbionts and associated
                                    microbiota
                                    Physiological and molecular
                                                                            L. Avio,
BONILLA LOOR, Mario Javier   2018   interactions between plants and
                                                                         M. Giovannetti
                                    beneficial fungi
                                    Study of the effects of dietary
                                    tannins and vegetable oils on the
                                                                            M. Mele
CAPPUCCI, Alice              2017   rumen microbiota composition,
                                    methane production and milk
                                    fatty acid composition
                                    Transcriptomic analysis of
                                    Arabidopsis thaliana in response
                                                                        L. Guglielminetti,
                                    to VOCs emitted from Solanum
CATOLA, Stefano              2016                                        M. Centritto
                                    lycopersicum subjected to
                                                                        (CNR, Florence)
                                    combined abiotic stress (water
                                    stress + UV radiation)
                                    Response of oak species
                                    (Quercus ilex, Q. cerris and Q.
COTROZZI, Lorenzo            2017   pubescens) to combined stress to         C. Nali
                                    simulate a 2050 global climate
                                    change scenario.
                                    Effects of a Trichoderma
FIORINI, Lisa                2016                                         G. Vannacci
                                    harzianum isolate on tomato
                                    Sustainability performance of
GAVA, Oriana                 2017                                          G. Brunori
                                    biogas chains
                                    Gene expression in olive plants
GENNAI, Clizia               2016                                           R. Gucci
                                    under drought conditions
                                    Pre- and post-imaginal
                                    associative learning for host-
                                    borne cues from different trophic
GIUNTI, Giulia               2016                                          A. Canale
                                    contexts in the parasitic wasp
                                    Psyttalia concolor (Szépligeti)
                                    (Hymenoptera: Braconidae)
The effects of agricultural policies
IBRAHIM EHDADAN, Jamal Ali          on wheat production in Libya.
                             2018                                            G. Brunori
Mohamed                             Policy Analysis Matrix Approach
                                    (PAM)
                                    Agronomic and phytochemical
                                    evaluation of Avena sativa L. and
MARTINI, Andrea              2018   Stevia rebaudiana Bert. as               L. Angelini
                                    sources of food and bio-active
                                    compounds
                                    Structural genomics of sunflower
MASCAGNI, Flavia             2016                                             L. Natali
                                    (Helianthus annuus L.)
                                    Producing olive oil with a high
                                    nutraceutical and organoleptic
NARI, Anita                  2019   quality using innovative operative        A. Zinnai
                                    technique (extraction and storage
                                    method)
                                    Molecular and functional
                                                                           M. Giovannetti,
PALLA, Michela               2018   biodiversity of microrganisms
                                                                            M. Agnolucci
                                    related to food production
                                    Biofortification of food plants by
                                    mycorrhizal symbionts:
PEPE, Alessandra             2017                                          M. Giovannetti
                                    investigations on the role of
                                    mycelial networks.
                                    Enrichment of food crops with
                                    selenium. Controlled production
                                    of selenium-enriched plants to          F. Malorgio,
PUCCINELLI, Martina          2017   delay fruit ripening and plant         B. Pezzarossa
                                    senescence and to increase the          (CNR, Pisa)
                                    nutritive value and the health
                                    benefits.
SANTIN, Marco                2019   UV-B signalling in fruits: from
                                                                             A. Ranieri
                                    perception to fruit quality
SOLORZANO ZAMBRANO,                 Functional genomics of fig (Ficus
                             2018                                           A. Cavallini
Liceth Yanina                       carica L.)
                                    Application of jasmonates to
                                    improve the production of
SULCA VILLAMARÌN, Tania
                             2017   secondary metabolites in plants          P. Vernieri
Salomé
                                    of agricultural interest, grown in
                                    vitro and in vivo
                                    Transcriptome analyses through
VANGELISTI, Alberto          2018                                           T. Giordani
                                    next generation sequencing
                                    Wine quality changes under
XIAOGUO, 'Stone' Ying        2018                                             A. Zinnai
                                    different storage conditions
Insights on the mechanisms of
ZAPPARATA, Antonio                     2018      action of the Trichoderma-based         G. Vannacci
                                                 biopesticide Remedier®

Publications
From 2017 to 2018, PhD students at DAFE have published more than one hundred
articles, including research or review papers in peer-reviewed journals or in conference
proceedings. A selection of publications related to the subject of the dissertation of each
candidate is reported below:
Abou Chehade L., Al Chami Z., de Pascali S.A., Cavoski I., Fanizzi F.P. (2017). Biostimulants
  from food processing by-products: agronomic, quality and metabolic impacts on organic tomato
  (Solanum lycopersicum L.). Journal of the Science of Food and Agriculture 2017.
Ascrizzi R., Taglieri I., Sgherri C., Flamini G., Macaluso M., Sanmartin C., Venturi F., Quartacci
  M.F., Pistelli L., Zinnai A. (2018). Nutraceutical oils produced by olives and citrus peel of
  tuscany varieties as sources of functional ingredients. Molecules 24: 010065.
Buti M., Moretto M., Barghini E., Mascagni F., Natali L., Brilli M., Lomsadze A., Sonego P., Giongo
  L. et al. (2018). The genome sequence and transcriptome of Potentilla micrantha and their
  comparison to Fragaria vesca (the woodland strawberry). GigaScience 7: 1-14.
Catola S., Castagna A., Santin M., Calvenzani V., Petroni K., Mazzucato A., Ranieri A. (2017).
  The dominant allele Aft induces a shift from flavonol to anthocyanin production in response to
  UV-B radiation in tomato fruit. Planta 246: 263-275.
Ceccanti C., Landi M., Benvenuti S., Pardossi A., Guidi L. (2018). Mediterranean Wild Edible
  Plants: Weeds or ―New Functional Crops‖? Molecules 23: 2299.
Cotrozzi L., Campanella A., Pellegrini E., Lorenzini G., Nali C., Paoletti E. (2018).
  Phenylpropanoids are key players in the antioxidant defense to ozone of European ash,
  Fraxinus excelsior. Environmental Science and Pollution Research 25: 8137-8147.
Galli F., Arcuri S., Bartolini F., Vervoort J., Brunori G. (2017). Exploring scenario guided pathways
  for food assistance in Tuscany. Bio-based and Applied Economics 5: 237-266.
Gava, O., Bartolini, F., Venturi, F., Brunori, G., Zinnai, A., & Pardossi, A. (2018). A reflection of the
  use of the life cycle assessment tool for agri-food sustainability. Sustainability 11:11010071.
Giovannetti A. (2018). Substances with endocrine disrupting properties: the regulation approach
  in the European Union between risks and scientific uncertainties, Third Canadian Conference
  on food law and policy, ―Innovations in Agrifood Law‖, 25-27 September 2018, Laval University,
  Quebec, Canada.
Guidi L., Remorini D., Cotrozzi L., Giordani T., Lorenzini, G., Massai R., Nali C., Natali L.,
  Pellegrini E., Trivellini A., Vangelisti A., Vernieri P., Landi M. (2017). The harsh life of an urban
  tree: the effect of a single pulse of ozone in salt-stressed Quercus ilex saplings. Tree
  Physiology 37: 246-260.
Hebinck A., Galli F., Arcuri S., Carroll B., O‘Connor D., Oostindie H. (2018). Capturing change in
  European food assistance practices: a transformative social innovation perspective. Local
  Environment 23: 398-413.
Lo Piccolo E., Landi M., Pellegrini E., Agati G., Giordano C., Giordani T., Lorenzini G., Malorgio
  F., Massai R., Nali C., Rallo G., Remorini D., Vernieri P., Guidi L. (2018). Multiple
  consequences induced by epidermally-located anthocyanins in young, mature and senescent
  leaves of Prunus. Frontiers in Plant Science 9: 917.
Lucchi A., Ladurner E., Iodice A., Savino G., Ricciardi R., Cosci F., Conte G., Benelli G. (2018).
  Eco-friendly pheromone dispensers—a green route to manage the European grapevine moth?
  Environmental Science and Pollution Research 25: 9426–9442.
Lucchi A., Loni A., Gandini L.M., Scaramozzino P.L., Ioriatti C., Ricciardi R., Shearer P.W.
  (2017). Using herbivore-induced plant volatiles to attract lacewings, hoverflies and parasitoid
  wasps in vineyards: achievements and constraints. Bulletin of Insectology 70: 273-282.
Mannelli F., Cappucci A., Pini F., Pastorelli R., Decorosi F., Giovannetti L., Mele M., Minieri S.,
  Conte G., Pauselli M., Rapaccini S., Viti C., Buccioni A. (2018). Effect of different types of olive
  oil pomace dietary supplementation on the rumen microbial community profile in Comisana
  ewes. Scientific Reports 8:8455.
Mascagni F., Giordani T., Ceccarelli M., Cavallini A., Natali L. (2017). Genome-wide analysis of
  LTR retrotransposon diversity and its impact on the evolution of the genus Helianthus (L.). BMC
  Genomics 18: 634.
Mattioni D., Brunori G. (2018). Moving towards healthy diets: the key role of food
  environments. Nutrition and Food Science International Journal 6, issue 1.
Moles T.M., Mariotti L., De Pedro L.F., Guglielminetti L., Picciarelli P., Scartazza A. (2018).
  Drought induced changes of leaf-to-root relationships in two tomato genotypes. Plant
  Physiology and Biochemistry 128: 24-31.
Natali L., Vangelisti A., Guidi L., Remorini D., Cotrozzi L., Lorenzini G., Nali C., Pellegrini E.,
  Trivellini A., Vernieri P., Landi M., Cavallini A., Giordani T. (2018). How Quercus ilex L. saplings
  face combined salt and ozone stress: a transcriptome analysis. BMC Genomics 19: 872.
Palla M., Agnolucci M., Calzone A., Giovannetti M., Di Cagno R., Gobbetti M., Rizzello C. G.,
  Pontonio E. (2018). Exploitation of autochthonous Tuscan sourdough yeasts as potential
  starters. International Journal of Food Microbiology, August 2018, in press.
Palla M., Battini F., Cristani C., Giovannetti M., Squartini A., Agnolucci M. (2018). Quorum sensing
  in rhizobia isolated from the spores of the mycorrhizal symbiont Rhizophagus intraradices.
  Mycorrhiza 28: 773-778.
Palla M., Cristani C., Giovannetti M., Agnolucci M. (2017). Identification and characterization of
  lactic acid bacteria and yeasts of PDO Tuscan bread sourdough by culture dependent and
Peruzzi A., Martelloni L., Frasconi C., Fontanelli M., Pirchio M., Raffaelli M. (2017). Machines for
  non-chemical intra-row weed control in narrow and wide-row crops: a review. Journal of
  Agricultural Engineering 48: 57-70.
Pierro R., Passera A., Panattoni A., Rizzo D., Stefani L., Bartolini L., Casati P., Luvisi A., Quaglino
   F., Materazzi A. (2018). Prevalence of a ‗Candidatus Phytoplasma solani‘ strain, so far
   associated only with other hosts, in Bois Noir-affected grapevines within Tuscan vineyards.
   Annals of Applied Biology 173: 202-212.
Puccinelli M., Malorgio F., Pezzarossa B. (2017). Selenium enrichment of horticultural crops.
  Molecules 22: 933.
Puccinelli M., Malorgio F., Terry L.A., Tosetti R., Rosellini I., Pezzarossa B. (2018). Effect of
  selenium enrichment on metabolism of tomato (Solanum lycopersicum) fruit during post‐harvest
  ripening. Journal of the Science of Food and Agriculture, October 2018, in press.
Rallo G., Provenzano G., Castellini M., Puig Sirera A. (2018). Application of EMI and FDR sensors
  to assess the fraction of transpirable soil water over an olive grove. Water 10: 168.
Sabella E., Pierro R., Luvisi A., Panattoni A., D‘Onofrio C., Scalabrelli G., Nutricati E., Aprile A., De
  Bellis L., Materazzi A. (2018). Phylogenetic analysis of viruses in Tuscan Vitis vinifera sylvestris
  (Gmeli) hegi. PLoS ONE 13: 1-16.
Sanmartin C., Venturi F., Macaluso M., Nari A., Quartacci M.F., Sgherri C., Flamini G., Taglieri I.,
  Ascrizzi R., Andrich G., Zinnai A. (2018). Preliminary results about the use of argon and carbon
  dioxide in the extra virgin olive oil (EVOO) storage to extend oil shelf life: chemical and sensorial
  point of view. European Journal of Lipid Science and Technology 120: 1800156.
Sanmartin C., Venturi F., Sgherri C., Nari A., Macaluso M., Flamini G., Quartacci M.F., Taglieri I.,
  Andrich G., Zinnai A. (2018). The effects of packaging and storage temperature on the shelf-life
  of extra virgin olive oil. Heliyon 4:e00888.
Santin M., Neugart S., Castagna A., Barilari M., Sarrocco S., Vannacci G., Schreiner M., Ranieri
  A. (2018). UV-B pre-treatment alters phenolics response to Monilinia fructicola infection in a
  structure-dependent way in peach skin. Frontiers in Plant Science 9: 1598.
Sbrana C., Strani P., Pepe A., de Novais C.B., Giovannetti M. (2018). Divergence of Funneliformis
  mosseae populations over 20 years of laboratory cultivation, as revealed by vegetative
  incompatibility and molecular analysis. Mycorrhiza 28: 1-13.
Serra A., Conte G., Giannessi E., Casarosa L., Lenzi C, Baglini A., Ciucci F., Cappucci A., Mele
  M. (2017). Histological characteristics, Fatty acid composition of lipid Fractions, and cholesterol
  content of Semimembranosus and Triceps Brachii Muscles in Maremmana and limousine
  Bovine Breeds. Frontiers in Veterinary Science 4:89.
Serra A., Conte G., Giovannetti M., Casarosa L., Agnolucci M., Ciucci F., Palla M., Bulleri E.,
  Cappucci A., Servili M., Mele M. (2018). Olive pomace in diet limits lipid peroxidation of
  sausages from Cinta Senese swine. Eur. J. Lipid Science and Technology 120: 1700236.
Solorzano Zambrano L.Y., Usai G., Vangelisti A., Mascagni F., Giordani T., Bernardi R.,
  Cavallini A., Gucci R., Caruso G., et al. (2017). Cultivar-specific transcriptome prediction and
  annotation in Ficus carica L. Genomics Data 13: 64–66.
Tavarini S., Passera B., Martini A., Avio L., Sbrana C., Giovannetti M., Angelini L.G. (2018). Plant
  growth, steviol glycosides and nutrient uptake as affected by arbuscular mycorrhizal fungi and
  phosphorous fertilization in Stevia rebaudiana Bert. Industrial Crops & Products 111: 899-907.
Turrini A., Bedini A., Bonilla Loor M., Santini G., Sbrana C., Giovannetti M., Avio L. (2018). Local
  diversity of native arbuscular mycorrhizal symbionts differentially affects growth and nutrition of
  three crop plant species. Biology and Fertility of Soils 54: 203-217.
Usai G., Mascagni F., Natali L., Giordani T., Cavallini A. (2017). Comparative genome-wide
  analysis of repetitive DNA in the genus Populus L. Tree Genetics & Genomes 13: 96.
Vangelisti A., Natali L., Bernardi R., Sbrana C., Turrini A., Hassani-Pak K., Hughes D., Cavallini
  A., Giovannetti M., Giordani T. (2018). Transcriptome changes induced by arbuscular
  mycorrhizal fungi in sunflower (Helianthus annuus L.) roots. Scientific Reports 8: 4.
Venturi F., Sanmartin C., Taglieri I., Xiaoguo Y., Deng S., Andrich G., Zinnai A. (2017). The
  influence of packaging on the time evolution of red wine. Shelf life of red wine as a function of
  the storage conditions adopted over a period of 12 months. Agro-Food Industry Hi-Tech 28: 61-
  63.
Zapparata A., Da Lio D., Sarrocco S., Vannacci G., Baroncelli R. (2017). First report of
  Colletotrichum godetiae causing grape (Vitis vinifera) berry rot in Italy. Plant Disease 101: 6.
Zapparata A., Da Lio D., Somma S., Vicente Muñoz I., Malfatti L., Vannacci G., Moretti A.,
  Baroncelli R., Sarrocco S. (2017). Genome sequence of Fusarium graminearum ITEM 124
  (ATCC 56091), a mycotoxigenic plant pathogen. Genome Announcements 5: e01209-17.
Applications

Candidates are required to have a Master's degree and have to demonstrate good
knowledge of the research themes reported above.

The number of graduates students admitted to each program varies from year to year
depending on the number of grants available and the results of the selection process. For
instance, 12 candidates were admitted in 2018 (XXXIV cycle, 2018-2021) and ten
scholarships were available, including two reserved for candidates who have achieved
their MSc degree abroad.

A grant consists of a stipend of approx. € 13,600 per year (including social security
contribution) for the whole duration of the PhD programme (3 years maximum). The grant
is increased by 50% if the student does an internship (at least 15 days) abroad in a foreign
academic or research institution. After the first year, each candidate receives an annual
research contribution of approximately € 1,600.

The selection of PhD candidates is based on their educational (f.i., average exam grade,
final numerical grade for the entire degree, honour etc.) and scientific (publications,
positions as young scientist, stage abroad etc.) curriculum and on an interview (either on
site or via web conference) conducted in the research areas that every year the Board
proposes to the new candidates.
The admission call is open in May-June and the selection takes place in August-
September. The candidates should check the website ( http://dottorato.unipi.it/index.php/en/)
regularly for additional information on deadlines for applications, proposed research
subjects, selection criteria, date(s) of interview, number of scholarships and positions
without scholarship, and university fee.

Candidates may also be admitted, at any time, under the supernumerary category if:
   -   they hold a grant or a similar form of funding which is part of a project promoted by
       the European Union and/or other European or international organizations;
   -   they are non-EU citizens who do not reside in Italy and hold a grant or have some
       form of economic support from their country of origin.
Supernumerary PhD candidates may be required to pay an annual departmental               fee
(bench fee), which depends on the type of research work and will be determined by        the
DAFE. For further information on the admission of supernumerary students,                the
candidates should look at http://dottorato.unipi.it/index.php/en/ and/or contact         the
Coordinator (andrea.cavallini@unipi.it).
Living in Pisa

The cost of living in Pisa is approximately € 600-700 per month; for instance, the rental for
student accommodation ranges between € 300 and € 400 per month.
Free registration to the Italian National Health Service (SSN) guarantees medical care for
all Italian students. Health care assistance is also available to all European citizens
(belonging to EU Member States and EEA States) who have the EHIC/TEAM card
(European Health Insurance Card) or who enrol in the SSN. For non-EU foreign citizens
(who belong to countries which are outside the European Union and of the European
Economic Area), the insurance coverage for health services or hospitalization is required
to obtain an entry visa in Italy and then later the residence permit.
Further     information      can     be     found     in    the     International     Student's      Guide
(https://www.unipi.it/index.php/erasmus-programme/item/download/12096_a29ded56d63481040f6be5ce001f1c09)

Contacts

   Secretariat: Dr. Stefano Fanti, DAFE, Via del Borghetto 80, 56124 Pisa (Italy)
    Tel. +39 050 2216 083; fax +39 050 2210 606; email: stefano.fanti@unipi.it

   Coordinator: Prof. Andrea Cavallini, DAFE, Via del Borghetto 80, 56124 Pisa (Italy)
    email: andrea.cavallini@unipi.it.
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