Chapter 2: Selection of Focus Areas

 
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Chapter 2: Selection of Focus Areas
South Fork Eel River SHaRP Plan

2. Chapter 2: Selection of Focus Areas
The SHaRP approach is based on the concept                    maintaining a source of colonists for
that focusing restoration in areas where                      occupying vacant habitats, and those
steelhead and salmon still persist offers the                 populations demographically connecting and
best potential for making measurable                          supporting each other as metapopulations is
progress toward recovery overall, and toward                  well established in ecology and shown
specific recovery needs for particular areas.                 graphically in Figure 2-1. (Levins 1969,
The concept of larger populations                             Hanski and Gilpin 1996).

Figure 2-1. Diagram of types of metapopulations and emigration from occupied to unoccupied areas (Levins 1969,
Hanski and Gilpin 1996).

Whether a species can persist in a patch or not               loss, degradation, and fragmentation are
depends on the quantity and spatial                           among the most serious threats to Pacific
configuration of habitat within a network of                  salmon, the metapopulation concept has been
connected patches. Under metapopulation                       embraced in salmon conservation and
models, patch occupancy is dynamic and                        management (Schtickzelle and Quinn 2007,
governed by local colonization and extinction                 McElhany et al. 2000). Salmon recovery
processes (Hanski et al. 1998). As habitat                    efforts should focus not just on restoring

Chapter 2: Selection of Focus Areas                                                                      Page 2-1
Chapter 2: Selection of Focus Areas
South Fork Eel River SHaRP Plan

habitat but also on the proximity of habitat to                Therefore, the first step of the SFER SHaRP
sources of potential colonists. As a first                     pilot effort was to identify the patches with
principle, the strongest local populations are                 the highest potential for recovery of
then the most critical watersheds to secure                    salmonids. This chapter describes the process
and recover in the short term to ensure                        the steering team followed to compare the 19
proximal habitats have the potential to be                     United States Geological Survey (USGS)-
colonized over the longer term when suitable                   delineated Hydrologic Unit Code (HUC)
habitat becomes available. These strategies                    HUC-12 sub-watersheds that make up the
are rooted in the idea of ‘protecting the best                 SFER sub-basin and determine which to
first’ and expanding restoration outward                       select for further detailed planning. Figure
(Beechie et al. 2008). The SHaRP process is                    2-2 depicts the SHaRP process steps,
guided by this principle to focus limited                      including where and when the collaborative
salmonid recovery dollars in patches with the                  leveraged best available science, with the
highest potential for recovery of salmonids                    first box, outlined in red to demonstrate
and build out restoration from these core                      where we are in describing the process. We
areas.                                                         also use this figure in the following chapters
                                                               to highlight where subsequent aspects of
                                                               process are described.

Figure 2-2. The South Fork Eel River SHaRP process, with emphasis on selection of the focus areas.

Chapter 2: Selection of Focus Areas                                                                  Page 2-2
South Fork Eel River SHaRP Plan

Selecting Focus Areas                               provide a final score for each HUC-12 sub-
                                                    watershed.
The steering team compiled and evaluated
data from across the South Fork Eel River           Data used for each category outlined in
(SFER) sub-basin that described the                 Bradbury et al. (1995), associated processing,
condition of salmonids and their habitat, as        and description of any final adjustments are
well as human impacts. Only data sources            described by category below. Appendix A
available for all or most of the 19 HUC-12s         details the data used in the SHaRP process.
were included. Metrics were developed for
each data source, and each metric was               Biological Importance
assigned to one of four categories inspired by
                                                    The steering team summarized publicly
Bradbury et al. (1995): Biological
                                                    available data on the current distribution and
Importance, Habitat Condition, Optimism
                                                    spawning density of salmonids as a ranking
and Potential, and Integrity and Risk. The
                                                    metric for the biological importance of each
team used an iterative process to assign
                                                    HUC-12 watershed. Current estimated
weights to each metric and added qualitative
                                                    Chinook and Coho Salmon and steelhead
scoring criteria to account for important
                                                    distribution was based on data collected from
aspects for which data were not available.
                                                    a variety of sources: CDFW, NMFS, private
For each category, each contributing metric         timber companies, university research, local
was ranked relative to the distribution of          watershed stewardship programs, and various
values for all sub-watersheds such that the         stakeholders. This data has largely been
highest metric is given a percent rank of 100       compiled and available in CDFW’s
and the lowest metric is given a percent rank       Biogeographic Information and Observation
of 0. Rank-weighted scores were then                System (BIOS). The total length of stream
assigned by quartiles; metrics with a percent       (km) within the current distribution of Coho
rank of 75-100 were given the highest score         Salmon (Christy 2016), Chinook Salmon
of 4, metrics with a percent rank of 50-74          (Gavette 2005), and steelhead (Christy 2012)
received a score of 3, etc. These rank-             were summed for each HUC-12 sub-
weighted scores were then adjusted to               watershed. The total length of stream within
account for confidence in the data. Where           Coho Salmon and steelhead distribution was
data was of questionable quality or                 adjusted based on CDFW staff assessment of
representation, a confidence multiplier (1.25-      the most up-to-date salmonid distribution.
0.25) could be applied to either increase or        Some values were also adjusted to reflect
decrease the effect of that metric on the           removal of mainstem Eel River distribution
overall ranking process. An adjustment for          because in most instances this habitat was
confidence occurred only seven times in this        used for migration rather than spawning or
process. All metric scores were then totaled        rearing. Chinook Salmon values were not
and a final adjustment was applied to weigh         adjusted in this way because this species uses
the final score for each category. The scores       the mainstem Eel River for spawning and
for each category were then summed to               rearing.

Chapter 2: Selection of Focus Areas                                                      Page 2-3
South Fork Eel River SHaRP Plan

Adult salmonid spawner density was                   diminished but good quality habitat with
primarily determined using the CDFW CMP              salmonids present, currently managed to
Adult Salmonid Spawning Ground Surveys               protect natural resources with the possibility
completed annually since 2010. The CMP is            to become high quality refugia) were
designed to describe the regional status of          summed for each HUC-12 and used as a
Coho Salmon in coastal watersheds including          contributing metric. Additionally, the SFER
the SFER (Adams et al. 2011). Coho Salmon,           WA also included habitat suitability index
Chinook Salmon, and steelhead redd density           (HSI) scores         from   an Ecosystem
(redds/km) from 2010-2016 (Starks and                Management Decision Support (EMDS)–
Renger 2016) were standardized by year (z-           based analysis of CDFW habitat typing
scored) and the mean redd density across all         surveys completed in the 1990s and 2000s.
years for each HUC-12 sub-watershed was              Outputs of the EMDS-based analysis that
used as the final contributing metric.               were used as metrics in the SHaRP ranking
Standardizing by year ensured that the               process included overall HSI scores, canopy
random samples drawn for surveying each              cover scores, pool depth scores, pool shelter
year were fairly represented by the relative         scores,     and     pool   tail-out    gravel
strength of each year’s salmonid return. Redd        embeddedness scores. Standardized score
surveys followed CMP protocols and                   values ranged from -1 (fully unsuitable) to 1
targeted Coho Salmon, so results for Chinook         (full suitable) and HUC-12 scores are based
Salmon and steelhead are incomplete. As              on a length-weighted mean of the reach
suggested by Bradbury et al. (1995),                 scores within each sub-watershed (i.e. longer
Biological Importance was weighted twice as          reaches have more influence on the average
high as the other categories of data to reflect      than shorter reaches). Number of pieces of
the focus on salmonids in this process.              large woody debris (LWD) per stream
                                                     kilometer from CDFW surveys, compiled by
Habitat Condition                                    CDFW Fortuna for 2009-2010 and UC
The steering team assembled habitat data             Hopland for 2002-2008 were also used as a
available from SFER Watershed Assessment             contributing metric. The number of pieces of
(SFER WA) (CDFW 2014) and CDFW                       LWD in both size classes (6-20 ft. long and >
habitat inventories. The SFER WA included            20 ft. long) were summed for each surveyed
watershed-wide ranking of stream habitat             reach and the final HUC-12 sub-watershed
suitability for Coho Salmon using a                  scores were based on a length-weighted mean
combination of available data and                    of the reach scores within each sub-
professional judgment (CDFW 2014). The               watershed.
length of streams (km) which were ranked as          The steering team also utilized modeled data
either “High Quality” (i.e. relatively               including the Intrinsic Potential model (IP
undisturbed habitat with the range and               model; Agrawal et al. 2005) and the
variability of conditions necessary to support       NorWeST stream temperature model
species diversity and natural salmonid               (Chandler et al. 2016) to rank the current
production) or “High Potential” (i.e.                physical habitat available to salmonids based

Chapter 2: Selection of Focus Areas                                                       Page 2-4
South Fork Eel River SHaRP Plan

on methods utilized in the Nehalem Strategic         mainstem portions of the Eel River were
Action Plan process (2020). Both models              removed from this analysis.
were used to subset stream reaches which
were ranked as “anchor-sites,” meaning that          Data on the presence of mélange geology was
they are expected to support all life stages of      also used to characterize the inherent
Coho Salmon. Anchor sites have mean                  hydrology of a watershed. Mélange layers are
August temperatures
South Fork Eel River SHaRP Plan

fragmentation and potential for water               percentage of stream miles of small to
diversions. The mean parcel size for each           medium-sized streams (drainage area
South Fork Eel River SHaRP Plan

Population census and parcel data were used          sub-division, and expert opinion of marijuana
to characterize the threats associated with          cultivation impacts. This adjustment was
increasing human population size including           based on professional judgement and expert
land development, increased water demands,           opinion of the perceived diversion pressure
and habitat fragmentation. We used census            within each sub-watershed. Each sub-
data from the 2010 U.S. Census which was             watershed received a default adjustment of 1
first modified to better characterize the            and a reduced score of either 0.5 or 0.75
wildland-urban interface and effects of              depending on the perceived severity of water
human development on natural areas                   diversion pressure. This adjustment score
(Radeloff et al. 2005). The census blocks            was then multiplied by the sum of the
were first intersected with each HUC-12              previously described contributing metrics
watershed boundary using the ArcGIS                  (after accounting for rank and confidence),
intersect tool (ESRI 2017). The population           effectively reducing the final Integrity and
density (persons per km2) reported for each          Risk score by 25 or 50% for each sub-
census block was then converted into the             watershed with moderate to severe diversion
count of persons for each census block using         pressure, respectively.
the new partial-block area. The population
density for each HUC-12 sub-watershed was            The results of the steering team ranking
then calculated as the sum of persons within         process are depicted in Figure 2-3. Scores
each sub-watershed divided by the respective         ranged from 136.5 for Hollow Tree Creek to
sub-watershed area. This population density          49.5 for the Upper East Branch. The top
was then used as a contributing metric. Land         seven ranked sub-watersheds were as
ownership, which was categorized as private,         follows: Hollow Tree Creek, SFER
non-timber company land per the SFER WA              Headwaters (Elder Creek), Indian Creek,
was used to characterize the potential for land      Sproul Creek, Bull Creek, Redwood Creek,
development and water extraction. The                and Standley Creek.
percentage of land within each sub-watershed
that fell into this category was summarized
and used as a contributing metric.

The steering team incorporated an Integrity
and Risk scoring adjustment to account for
undocumented water diversion pressure
which has been estimated to substantially
impact dry season flow (Bauer et al. 2015).
The steering team reviewed the Integrated
Resource Water Management Plan’s data set
of registered diversions and found it to be
deficient of most water diversions. In lieu of
a quantitative evaluation, the steering team
used information on human population, land

Chapter 2: Selection of Focus Areas                                                      Page 2-7
South Fork Eel River SHaRP Plan

Figure 2-3. Stacked bar chart of the sub-watershed scores, by category, for each of the nineteen HUC-12 sub-
watersheds of the SFER. The seven highest-scoring sub-watersheds, marked with yellow stars, were selected as focus
areas for further SHaRP planning.

The steering team presented the initial results               selection of focus areas. A few participants
of the sub-watershed ranking process at                       suggested other data to include in the
public meetings in Bayside, Laytonville, and                  ranking, and the team explained that these
Briceland, California in late 2017. We held                   data didn’t fit the criteria for inclusion
two meetings in Briceland to maximize the                     because they did not apply to all 19 sub-
opportunity for public input. At these                        watersheds. Participants didn’t suggest any
meetings, the steering team described the                     other changes to the preliminary ranking
SHaRP process and sought input on the                         methodology or results.
preliminary sub-watershed ranking results.
Meeting participants were neutral to                          Results of Focus Areas Selection
supportive of the SHaRP concept and                           After the public meetings, the steering team
generally agreed with the team’s preliminary                  finalized the SFER SHaRP focus areas which

Chapter 2: Selection of Focus Areas                                                                      Page 2-8
South Fork Eel River SHaRP Plan

are, from north to south: Bull Creek,               temperatures and helps support west side
Redwood Creek, Sproul Creek, Indian Creek,          redwood/Douglas fir forests. The distribution
Standley Creek, Hollow Tree Creek, and the          and relative abundance of Coho Salmon and
SFER Headwaters. This last area was                 steelhead, which was explicitly accounted for
originally called Elder Creek after the name        in scoring, may reflect generational success
of the HUC-12, but ultimately renamed               in those west-side areas where summer
because the HUC contains many other                 rearing is more successful.
important tributaries in the headwaters area.
The location of these focus areas within the        After the focus areas were selected, the
                                                    steering team began planning for each of the
SFER sub-basin is shown in Figure 2-4.
                                                    focus areas. This planning started with
All seven focus areas are on the west side of       identifying the known “experts” with
the SFER (Figure 2-4). This outcome reflects        experience in a particular focus area,
the spatial distribution of areas with high         inquiring of these experts who else should be
underlying potential for salmonid habitat in        included, and holding an Expert Panel and
the SFER. In addition, it is influenced by the      Action Team meeting for that focus area.
geologic and hydrologic drivers of salmonid         These important steps in the process are
habitat potential (detailed in Chapter 4): the      described in Chapter 3. The steering team
underlying geology on the west side can hold        came to refer to all the people that
water through the dry summer months that            participated in at least one of the Expert Panel
result from the region’s Mediterranean              and/or Action Team meetings (which
rainfall patterns, while differing geology on       included the steering team members) as the
the east side has less water-holding capacity;      Collaborative.
and dry season coastal fog moderates

Chapter 2: Selection of Focus Areas                                                       Page 2-9
South Fork Eel River SHaRP Plan

Figure 2-4. The 19 HUC-12 sub-watersheds of the SFER. The seven sub-watersheds shown in red were selected for
further restoration planning using SHaRP and subsequently described as focus areas.

Chapter 2: Selection of Focus Areas                                                                   Page 2-10
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