THE BIP PROTEIN AND THE ENDOPLASMIC RETICULUM OF SCHIZOSACCHAROMYCES POMBE: FATE OF THE NUCLEAR ENVELOPE DURING CELL DIVISION
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Journal of Cell Science 105, 1115-1120 (1993) 1115 Printed in Great Britain © The Company of Biologists Limited 1993 The BiP protein and the endoplasmic reticulum of Schizosaccharomyces pombe: fate of the nuclear envelope during cell division Alison L. Pidoux* and John Armstrong† Membrane Molecular Biology Laboratory, Imperial Cancer Research Fund, P.O. Box 123, Lincoln’s Inn Fields, London WC2A 3PX, UK *Present address: Department of Molecular and Cellular Biology, University of California, Berkeley, CA 94720, USA †Authorfor correspondence at present address: School of Biological Sciences, University of Sussex, Falmer, Brighton BN1 9QG, UK SUMMARY A polyclonal antibody was raised to the C-terminal temperatures and by treatment with tunicamycin. The region of fission yeast BiP. The use of this antibody for antibody cross-reacts with proteins of similar molecu- immunoprecipitation, western blotting and immunoflu- lar weight in the yeasts Kluyveromyces lactis and orescence has confirmed and extended the observations Schizosaccharomyces japonicus. Immunofluorescence of made previously with an epitope-tagged BiP molecule. BiP has been used to follow the behaviour of the ER A fraction of BiP protein is glycosylated in Schizosac - and in particular the nuclear envelope through the cell charomyces pombe cells. Pulse-chase experiments cycle. showed that this modification occurs rapidly upon syn- thesis and that the extent of glycosylation does not then change with time. BiP protein is induced by elevated Key words: hsp70, glycosylation, cytokinesis INTRODUCTION genetic analysis, but differs from that organism in many aspects of its molecular and cell biology. We have previ- The luminal compartment of the endoplasmic reticulum ously described the cloning and analysis of the BiP gene (ER) contains a subset of proteins that are soluble but nev- from S. pombe (Pidoux and Armstrong, 1992). Like its ertheless are not secreted by vesicle transport out of the homologue in S. cerevisiae, it is essential for viability and cell. One member of this group is BiP, a protein originally its mRNA is induced by various forms of stress. Unlike identified by its presence in the ER of pre-B cells, bound BiP proteins from most other species, however, the to heavy-chain immunoglobulin in the absence of light encoded protein contained a predicted site for N-linked chains (Haas and Wabl, 1983). The protein is now known glycosylation. By overexpressing an altered form of the to be ubiquitous, and is a member of the hsp70 family of gene encoding an immunological ‘tag’, we presented evi- stress-regulated proteins (Munro and Pelham, 1986). Unlike dence that this glycosylation site was used, but only in a other members of this family, BiP is synthesised with a small proportion of the molecules. The same tagged BiP cleavable N-terminal signal sequence for translocation into protein was used to visualise the ER of S. pombe by the ER, and a C-terminal sequence specifying its localisa- immunofluorescence, revealing the nuclear envelope as tion within the ER (Munro and Pelham, 1986, 1987). BiP well as a peripheral reticulum reminiscent of that found appears to function in regulating the folding and assembly in higher cells. These observations, however, had the of a variety of membrane and secretory proteins. This potential limitation of requiring the expression of an process requires binding to the nascent protein followed by altered protein at abnormal and variable levels in the pop- release coupled to ATP hydrolysis; in the cases of some ulation of cells. mutant proteins, the binding is irreversible (reviewed by We describe here the direct observation of BiP in wild- Gething and Sambrook, 1992). In the budding yeast Sac - type S. pombe, using an antibody raised to part of the pro- charomyces cerevisiae the BiP protein, which is encoded tein expressed in bacteria. We have compared the alter- by the gene KAR2, is additionally required for transloca- ations in protein levels under different forms of stress to tion of nascent proteins across the ER membrane, as well those of the corresponding mRNA, and monitored the effi- as in an undefined role in fusion of nuclei after mating ciency and kinetics of glycosylation. The antibody is shown (Rose et al., 1989; Normington et al., 1989; Vogel et al., to recognise an appropriately sized protein in two other 1990). yeast species. The immunofluorescence analysis of the ER The fission yeast Schizosaccharomyces pombe is a of S. pombe has been extended to show the behaviour of simple eukaryote that, like S. cerevisiae, is amenable to the nuclear envelope during the cell cycle.
1116 A. L. Pidoux and J. Armstrong MATERIALS AND METHODS staining with Ponceau S before immuno-labelling. Glutathione-S- transferase-ypt5 fusion protein (Armstrong et al., 1993) was pro- Yeast strains vided by Dr S. Ponnambalam. To demonstrate specificity of the S. pombe strain 972 and Schizosaccharomyces japonicus were antibody, each fusion protein was added during western blotting from Prof. Jeremy Hyams, University College, London; at a concentration of 1 µg/ml. Conventional and confocal immuno- Kluyveromyces lactis and Pichia pastoris from Dr Kevin Hard- fluorescence were as described (Pidoux and Armstrong, 1992) wick, Laboratory for Molecular Biology, Cambridge. except that cells were fixed by addition of 1/10 volume 37% formaldehyde to growing cultures and incubation continued at 30°C for 30 min. The anti-BiP antibody was used at a dilution of Preparation of anti-BiP antibody 1:100 for immunoprecipitation, 1:20000 for western blotting, and A 400 bp HindIII fragment from the 3′ region of the BiP gene 1:100 for immunofluorescence. Protein A-Sepharose was used (Pidoux and Armstrong, 1992) was inserted into the vector pATH3 directly for immunoprecipitation (Pidoux and Armstrong, 1992), for production of trpE-BiP fusion protein (Spindler et al., 1984). while peroxidase-conjugated and fluorescein-conjugated goat anti- Escherichia coli containing the pATH3-BiP plasmid were grown rabbit antibodies (both Tago) were used for western blotting and overnight at 37°C in 5 ml M9CA medium containing 20 mg/ml immunofluorescence, at dilutions of 1:1000 and 1:100, respec- tryptophan, 30 µg/ml ampicillin, diluted into 50 ml of the same tively. medium without tryptophan and grown at 30°C with vigorous aer- ation for 1 h. Then, 250 µl of 1 mg/ml indole acrylic acid was added and the incubation continued for 3 h. Cells were pelleted RESULTS and resuspended in 1 ml 10 mM NaPO4, pH 7.2, 1% β-mercap- toethanol, 1% SDS, 6 M urea and incubated at 37°C for 2-3 h. Production and characterisation of anti-BiP An equal volume of 2× sample buffer was added and the sample heated to 95°C for 5 min before loading onto a 10% SDS-PAGE antibodies gel. Proteins were transferred from the gel to nitrocellulose mem- The C-terminal 110 to 130 amino acids of S. pombe BiP brane by semi-dry blotting and visualised by Ponceau S staining. were used to make fusion proteins for immunisation of a The trpE-BiP fusion protein band was excised from the filter, rabbit. This region of the protein was chosen because it washed, dried and dissolved in dimethyl sulphoxide. shows minimal homology to other members of the hsp70 For production of glutathione-S-transferase-BiP fusion protein, family. Serum was tested for cross-reactivity against S. the vector pGEX-2T (Smith and Johnson, 1988) was first digested pombe proteins by western blotting (Fig. 1). Two species with BamHI and EcoRI and a synthetic polylinker was inserted. of 75-80 kDa were detected by the antibody in wild-type The resulting plasmid, pGEX20T, contained adjacent restriction sites for BamHI, EcoRI, XhoI, ClaI, SpeI and XbaI, while the orig- cells (lane 2), but not by pre-immune serum (lane 1). Bind- inal EcoRI site was destroyed. An EcoRI-XhoI fragment from the ing of the antibody could be inhibited by incubation with 3′ end of the BiP gene (Pidoux and Armstrong, 1992) was then glutathione-S-transferase-BiP fusion protein (lane 3) and inserted. A saturated 100 ml culture of E. coli containing the was specific to the BiP portion of the fusion protein since pGEX-20T-BiP plasmid was inoculated into 1 l of L-broth con- incubation with glutathione-S-transferase-ypt5 fusion pro- taining ampicillin and incubated for 1 h. Fusion protein was induced by addition of IPTG to 100 mM and the culture grown for a further 5 hours. Cells were pelleted and resuspended in 15 ml ice-cold 1% (v/v) Triton X-100 in phosphate-buffered saline (PBS-TX) and placed on ice. Cells were lysed by sonication (sev- eral 3 s bursts at full power). Then 2 ml of pre-swollen glutathione- agarose beads (Sigma) in PBS-TX was added to the lysate and incubated for 5 min at room temperature with inversion. Beads were pelleted by centrifugation at 1700 r.p.m. for 2 s and washed 5 times with ice-cold PBS-TX. The beads were gently transferred to a 2 ml tube and washed 3 times. Fusion protein was eluted by washing three times with 1 ml 0.5 M glutathione (Sigma), 50 mM Tris-HCl, pH 7.0, for 2 min at room temperature, and dialysed against PBS. A rabbit was injected with 0.5 mg of trpE fusion protein in complete Freund’s adjuvant. After several boosts of 0.5 mg of 92 kDa fusion protein in incomplete Freund’s adjuvant at 4-week inter- vals, no antibodies reactive against BiP had appeared. Therefore the same rabbit was immunised by a similar protocol with the glu- 69 kDa tathione-S-transferase fusion protein. Methods for induction of BiP, endoglycosidase H digestion, 35S-labelling of cells and immunoprecipitation, electrophoresis, fluorography and western blotting, were as before (Pidoux and Armstrong, 1992), with the exception that protein extracts were prepared by disruption with glass beads. Yeast cells in log phase were pelleted, resuspended in 2× sample buffer, an equal volume Fig. 1. Detection of S. pombe BiP protein by western blotting of acid-washed glass beads (425-600 µm; Sigma) was added and (lanes 1-4) and immunoprecipitation (lane 5). A doublet of the the cells were disrupted by vigorous vortexing. Extracts were predicted size is recognised by immune (lane 2) but not pre- immediately heated to 95°C for 5 min, centrifuged briefly and the immune (lane 1) serum. Binding is prevented by BiP fusion supernatants taken for gel electrophoresis. Efficient transfer of protein (lane 3) but not by ypt5 fusion protein (lane 4). GST, proteins to membranes for western blotting was confirmed by glutathione-S-transferase.
BiP from fission yeast 1117 Fig. 3. Induction of BiP protein by heat shock and tunicamycin treatment. Equal numbers of cells were incubated at 30°C (lane 1) or 39°C for 30 min (lane 2) or with 1 µg/ml tunicamycin at 30°C for 2 h (lane 3). In each case cells were labelled for the last 30 min of incubation, and the BiP protein immunoprecipitated. Both treatments cause some induction of protein; in the presence of tunicamycin only the unglycosylated form is observed. Tm, tunicamycin Fig. 2. Partial glycosylation of S. pombe BiP. The upper band of the BiP doublet detected by western blotting (lane 1) is removed by digestion with endoglycosidase H (lane 2). Pulse-chase tein. The proportion of glycosylated protein did not change analysis of 35S-labelled protein (lanes 3-7) shows no change in the throughout the chase period up to 2 h (lanes 4-7). These proportion of the glycosylated form in protein immunoprecipitated observations indicate that BiP is glycosylated concomi- after 5, 10, 30, 60 and 120 min after the start of the chase. tantly with or very shortly after its synthesis. In mammalian cells BiP is induced by agents such as tunicamycin and calcium ionophores but not by heat shock. tein showed no such effect (lane 4). The anti-serum could S. pombe BiP mRNA is induced by heat shock and by treat- also immunoprecipitate both BiP species from metaboli- ment with tunicamycin (Pidoux and Armstrong, 1992). To cally labelled cells (lane 5). Therefore the antiserum appears determine whether BiP protein levels were also affected by to be specific for S. pombe BiP protein. these treatments, BiP was immunoprecipitated from The BiP protein labelled cells. Cells subjected to 30 min heat shock at 39oC contain a higher level of the glycosylated and unglycosy- S. pombe BiP contains a single potential N-linked glyco- lated forms of BiP (Fig. 3, lane 2) than untreated cells (lane sylation site near the N terminus of the protein. We have 1). In cells treated with 1 µg/ml tunicamycin for 2 h (lane previously shown that a fraction of epitope-tagged BiP 3) only the unglycosylated form is present, as expected for expressed from a plasmid receives core carbohydrate mod- an inhibitor of N-linked glycosylation. The level of the ung- ifications (Pidoux and Armstrong, 1992). To confirm that lycosylated form is higher in these cells than in the this phenomenon was not restricted to the altered version untreated control. of the BiP protein, S. pombe protein extracts were incu- bated overnight in the presence or absence of endoglycosi- dase H and analysed by western blotting (Fig. 2, lanes 1 Cross-reactivity of anti-BiP antibody and 2). The upper band disappears upon endoglycosidase Although BiP proteins from different species show low H treatment, indicating that it contains N-linked carbohy- homology in their C-terminal regions, it was possible that drate. A pulse-chase experiment was performed to investi- the antibody raised against S. pombe BiP would cross-react gate whether glycosylation occurs immediately upon syn- with other yeast BiP proteins and might therefore be useful thesis or gradually, with all BiP molecules eventually for their study. Protein extracts were made from becoming glycosylated. After 5 min of labelling, immuno- Kluyveromyces lactis, Saccharomyces cerevisiae, Pichia precipitated BiP was present as both the glycosylated and pastoris, Schizosaccharomyces japonicus and S. pombe unglycosylated forms (Fig. 2, lane 3), with the glycosylated cells, and analysed by western blotting using the anti-BiP form accounting for approximately 10% of the total pro- antibody (Fig. 4A). Cross-reactive species of the expected A B 92 kDa 69 kDa Fig. 4. (A) Reaction of the antiserum with other yeast species. Equivalent amounts of extracts from S. pombe (lane 1), K. lactis (lane 2), S. japonicus (lane 3), S. cerevisiae (lane 4) and P. pastoris (lane 5) were analysed by western blotting with the BiP antibody. K. lactis and S. japonicus have a faint cross-reacting band of the appropriate mobility. (B) Alignment of the C-terminal regions of BiP protein sequences from K. lactis (K. l.) and S. pombe (S. p.), showing regions of consensus (con).
1118 A. L. Pidoux and J. Armstrong Fig. 5. Immunofluorescence of BiP. (A) Conventional epifluorescence microscopy shows labelling of the nuclear envelope and elements close to the plasma membrane. (B,C) Confocal microscopy. A section through the centre of cells (B) shows similar structures to (A). An image from approximately 2 µm above the centre of the cells (C) reveals in addition a network of peripheral tubules. Bars: 10 µm (A); 2 µm (B, C). mobility for BiP were detected in K. lactis and S. japonicus wild-type BiP is the same as that previously reported for extracts, though the bands were fainter than for S. pombe epitope-tagged protein (Pidoux and Armstrong, 1992). BiP. S. japonicus and S. pombe are related fission yeasts. In The behaviour of the ER during the cell cycle, and par- contrast, the budding yeast K. lactis , whose BiP gene has ticularly the nuclear envelope, could be followed using the been cloned (Lewis and Pelham, 1990), is much more dis- anti-BiP antibody (Fig. 6). The cell in Fig. 6A has just tantly related to S. pombe. However, a comparison of the divided from its sister cell; staining of the nuclear envelope C-terminal amino acid sequences of BiP from the two and peripheral ER is apparent. Cell growth occurs at the species revealed regions of sequence conservation (Fig. 4B). ends of the cell (Fig. 6B, C) with cell length increasing from 7 to 14 µm through the cell cycle. Early in anaphase, Immunofluorescence with the anti-BiP antibody when the chromosomes begin to separate, the nucleus elon- Wild-type cells were fixed with formaldehyde and gates as is shown by the shape of the nuclear envelope stain- processed for immunofluorescence using the anti-BiP anti- ing in Fig. 6D. As the spindle elongates in anaphase B the body. The nuclear envelope, elements near the plasma nuclei move apart (Fig. 6E, F). In Fig. 6E labelling that membrane and strands through the cytoplasm were labelled appears to correspond to two thicknesses of nuclear enve- (Fig. 5A). This distribution was also observed by confocal lope membrane is seen stretching between the nuclei. The microscopy of the mid-section of cells (Fig. 5B); in addition nuclei in fact move almost to the ends of the cell before images from above or below the mid-section revealed a they return to the centre of the two incipient daughter cells peripheral reticulum (Fig. 5C). Thus the distribution of (Fig. 6G). By this time the nuclear envelope, which was
BiP from fission yeast 1119 Fig. 6. Confocal immunofluorescence of BiP in cells at different stages of the division cycle. The nuclear envelope elongates (B,C) until the daughter nuclei are connected by a thick strand of BiP-labelled membrane (D-F). Just before and during cell division BiP protein appears concentrated at the equator (G). Bar, 2 µm. stretched between the two nuclei, has virtually disappeared. There is a striking concentration of ER staining at the equa- tor of cells that are about to divide or are dividing (Fig. 6E, G). Further images of this phenomenon are shown in Fig. 7. The reticular structures are present around the cell periph- ery throughout the cell cycle and do not appear to break down at any stage (data not shown). DISCUSSION The BiP protein is of interest for several reasons: its role in folding and assembly of membrane and secretory pro- teins, its inducibility following a variety of cellular stresses, and as a model protein retained in the ER lumen. Previ- ously we reported the cloning of the BiP gene from the fis- sion yeast S. pombe, and its unusual retention signal, ADEL (Pidoux and Armstrong, 1992). Here we have described an immunological analysis of the BiP protein, using an anti- body raised to bacterially expressed C-terminal fragments of the protein. An unexpected feature of the predicted amino acid sequence was a site for N-linked glycosylation. Such sites are generally absent from BiP sequences; in contrast, they are present but necessarily unused in cytoplasmic members of the hsp70 family. In an epitope-tagged BiP the site was Fig. 7. Confocal immunofluorescence of BiP in cells undergoing used, but in only a small proportion of the molecules cytokinesis. Before cell division (A-E) there is a concentration of (Pidoux and Armstrong, 1992). We have shown here that labelling at the cell equator, appearing as a patch or spot. This the same applies to the natural protein, and in addition that material appears to be shared between the two daughter cells upon the extent of glycosylation does not increase with time, in division (F). Bar, 2 µm. spite of the co-localisation of BiP with the glycosylation machinery in the ER (Fig. 2). Thus the glycosylation site presumably is inaccessible after the protein has been cosylation is a late event related to degradation of the pro- translocated, folded and released into the ER lumen. One tein. Hence the functional significance of the partial glyco- possibility apparently eliminated by these results is that gly- sylation remains unknown.
1120 A. L. Pidoux and J. Armstrong We investigated the ability of the antibody to react with ture comprises two concentric tubules separately connected BiP from other species of yeast. Antibodies to conserved to the inner and outer nuclear envelopes, do the separate luminal proteins of the secretory pathway in general show layers have different compositions reflecting their distinct quite a restricted specificity, thereby avoiding reaction with origins? Is the process of membrane breakage purely the homologous protein of the host species within the ER mechanical, or does it require a distinct scission activity? or Golgi of the antibody-producing cell. The antibody did Is the ER material at the equator specifically involved in not react with mammalian cells (not shown), or with the generating the new plasma membrane that subsequently budding yeasts S. cerevisiae or Pichia pastoris (Fig. 4A). forms at the same site? Future work may help to integrate Conversely, an antibody to BiP of S. cerevisiae (Rose et the answers to these questions with the wealth of informa- al., 1989) did not cross-react with S. pombe (not shown). tion already available concerning other aspects of the cell The S. pombe antiserum did detect a protein in the related cycle in S. pombe. fission yeast S. japonicus and also, surprisingly, in the bud- ding yeast K. lactis (Fig. 4A). The sequence of BiP from We thank Jeremy Hyams and Kevin Hardwick for yeast strains, the latter species is known (Lewis and Pelham, 1990). Com- Mark Rose for antibody, Vas Ponnambalam for fusion protein, parison of the sequences revealed a short region of sequence and Kathryn Ayscough, Sally Bowden, Mark Craighead, Kevin Hardwick and Vas Ponnambalam for helpful discussions during conservation near the C terminus (Fig. 4B). Previously we the course of this work. showed that the C-terminal sequence of S. pombe BiP, ADEL, acted as an ER retention signal in this species, and that variants from other species, including the K. lactis sequence DDEL, could also function but less efficiently REFERENCES (Pidoux and Armstrong, 1992). The conserved sequence Armstrong, J., Ponnambalam, S., Craighead, M., Watson, R. and includes the first three of these residues, DDE, which pre- Bowden, S. (1993). Schizosaccharomyces pombe ypt5: a homologue of cede the ADEL signal in the S. pombe protein. It may be the rab5 endosome fusion regulator. Mol. Biol. Cell (in press). of interest to determine if other ER proteins from the two Gething, M.-J. and Sambrook, J. (1992). Protein folding in the cell. species are similarly related at their C termini. Nature 355, 33-45. Haas, I. G. and Wabl, M. (1983). Immunoglobulin heavy chain binding Our previous immunofluorescence analysis of epitope- protein. Nature 306, 387-389. tagged BiP protein in S. pombe revealed, in addition to the Lewis, M. J. and Pelham, H. R. B. (1990). The sequence of the nuclear envelope, a polygonal reticular structure in the cell Kluyveromyces lactis BiP gene. Nucl. Acids Res. 18, 6438. periphery reminiscent of the reticulum of higher cells Munro, S. and Pelham, H. R. B. (1986). An hsp70-like protein in the ER: identity with the 78 kd glucose-regulated protein and immunoglobulin (Pidoux and Armstrong, 1992). Immunofluorescence with heavy chain binding protein. Cell 46, 1094-1101. the anti-BiP antibody confirmed that this structure is con- Munro, S. and Pelham, H. R. B. (1987). A C-terminal signal prevents stitutive and not an artefact of the expression system (Fig. secretion of luminal ER proteins. Cell 48, 899-907. 5C). During mitosis in higher cells the nuclear envelope Normington, K., Kohno, K., Kozutsumi, Y., Gething, M.-J. and and, to some extent the peripheral ER, vesiculate and then Sambrook, J. (1989). S. cerevisiae encodes an essential protein homologous in sequence and function to mammalian BiP. Cell 57, 1223- reassemble around the daughter nuclei. In contrast S. 1236. pombe, like other yeasts, undergoes closed mitosis in which Pidoux, A. L. and Armstrong, J. (1992). Analysis of the BiP gene and the nuclear envelope elongates and then divides without identification of an ER retention signal in Schizosaccharomyces pombe. breaking down. We have observed the stages of this process EMBO J. 11, 1583-1591. Rose, M. D., Misra, L. M. and Vogel, J. P. (1989). KAR2, a karyogamy in S. pombe by immunofluorescence of BiP in cells at dif- gene, is the yeast homolog of the mammalian BiP/GRP78 gene. Cell 57, ferent points of the cell cycle (Fig. 6). A striking feature is 1211-1221. the appearance of a thick strand of material that connects Smith, D. B. and Johnson, K. S. (1988). Single-step purification of the two separating nuclei and then disappears before the polypeptides expressed in Escherichia coli as fusions with glutathione-S- daughter cells separate (Fig. 6E-G). The fate of this mem- transferase. Gene 67, 31-40. Spindler, K. R., Rosser, D. S. E. and Berk, A. J. (1984). Analysis of brane is unknown; it may shrink back around the two nuclei, adenovirus transforming proteins from early regions 1A and 1B with or form cytoplasmic ER, or be degraded. Alternatively, it antisera to inducible fusion antigens in E. coli. J. Virol. 49, 132-141. may contribute to the concentration of membrane that Vogel, P., Misra, L. M. and Rose, M. D. (1990). Loss of BiP/GRP78 appears at the equator (Figs 6G, 7). function blocks translocation of secretory proteins in yeast. J. Cell Biol. 110, 1885-1895. The appearance of these structures raises numerous ques- tions concerning their topology, function and coordination (Received 22 October 1992 - Accepted, in revised form, with other events in the cell cycle. If the filamentous struc- 27 April 1993)
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