Study on the Dynamic Proliferation of JEV in BHK-21 Cells
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Research Article Intervirology 2021;64:1–7 Received: April 24, 2020 Accepted: July 29, 2020 DOI: 10.1159/000510585 Published online: January 5, 2021 Study on the Dynamic Proliferation of JEV in BHK-21 Cells Fuliang Zhang a, b Jun Luo c Man Teng c Guangxu Xing c Junqing Guo c Yihua Zhang a aCollege of Veterinary Medicine, Northwest A & F University, Yangling, China; bCollege of Biology and Food Engineering, Anyang Institute of Technology, Anyang, China; cHenan Provincial Key Laboratory of Animal Immunology, Key Laboratory of Animal Immunology of the Ministry of Agriculture, Henan Academy of Agriculture Sciences, Zhengzhou, China Keywords Introduction Japanese encephalitis virus · Proliferation profile · Proliferation curve · Quantitative real-time PCR Epidemic Japanese encephalitis (JE) is one of the most important zoonotic diseases caused by the transmission of Japanese encephalitis virus (JEV) through mosquitoes Abstract and causes central nervous system damage. Approxi- Introduction: Epidemic Japanese encephalitis is one of the mately 70,000 people are infected with JE every year most important zoonotic diseases that cause central ner- worldwide, of which 10,000–15,000 die [1, 2]. Survivors vous system damage. The vaccination has become the most of severe cases often leave severe sequelae. JEV is classi- effective and economical measure for its control. Hence, re- fied within the family Flaviviridae, genus Flavivirus. It is al-time monitoring of Japanese encephalitis virus (JEV) pro- an enveloped virus containing a positive-sense single- liferation is crucial to optimize virus inoculation, culturing stranded ribonucleic acid (RNA) genome approximately conditions, and virus harvest time. Methods: The prolifera- 11 kilobases in length. The genome encodes 3 structural tion dynamics of JEV in BHK-21 cells was studied by combin- proteins (capsid, pre-membrane or membrane, and enve- ing the established quantitative PCR method with the con- lope (E)), and 7 non-structural proteins [3–5]. ventional TCID50 assay in this study. Results: The prolifera- There are no effective drugs for treating JE currently, tion curve determined by the 2 methods has a definite and vaccination has become the most effective and eco- parallel relationship, but the quantitative real-time PCR nomical measure for epidemic control. In the production method (4 h) is faster and more sensitive than the TCID50 of JEV, BHK-21 and Vero cells are mostly used for the method (3–4 days). The determination results of TCID50 proliferation of the virus [6–8]. As is known to all, the showed that the highest viral titer was 105.44 TCID50/0.1 mL quality and effect of the vaccine are closely associated and 104.86 TCID50/0.1 mL in cell suspension and culture su- with the proliferation of the virus in the cell. Hence, real- pernate, respectively, while the virus RNA copies reached the time monitoring of JEV proliferation is crucial to opti- peak at 1.0 × 107.5 copies/µL and 1.0 × 105.6 copies/µL in cell mize virus inoculation, culturing conditions, and virus suspension and culture supernate, respectively. Conclusion: harvest time. The comprehensive analysis showed that the best time for TCID50 detection is currently used to determine the JEV proliferation in BHK-21 cell was 60 h post infection. quantitative assay of JEV [9–11]. However, due to the © 2021 S. Karger AG, Basel karger@karger.com © 2021 S. Karger AG, Basel Yihua Zhang www.karger.com/int College of Veterinary Medicine Northwest A & F University No. 3 Taicheng Road, Yangling 712100 (China) zyh19620207@163.com
Table 1. Primers and probes used in this Name Sequences (5′–3′) Amplicon study size, bp JEV-F* GCTGGATCC 184 CTGAAATGTAGGCTGAAAAT JEV-R* CCAAGCTT TGAGGCTCGCAAGGAAACA JEV-R-F** CAACCTATGGCATGTGTA 103 JEV-R-R** CCATCACTCCCAGAGTAG JEV-probe FAM-CAATGACAACTGTTCCGTGACCA-BHQ JEV, Japanese encephalitis virus. Letters in italics indicate the restriction site in the primer. * Primers used for the construction of the standard plasmids and conventional PCR. ** Primers used for qRT-PCR. complexity of the method, the practical application is re- Primers and Probes Design stricted by many conditions. Nowadays, qRT-PCR has Multiple sequence alignments of the E gene of JEV available in GenBank were performed with Clustal-W (DNAStar Inc., Madi- been widely used for the qualitative and quantitative de- son, WI, USA), and conserved regions were identified. Primers tection of the virus due to its specificity, sensitivity, and and probe were designed to target conserved regions of E gene by accuracy [12–18], whereas qRT-PCR detects only viral Primer Premier 5.0 (Primer Biosoft International, Palo Alto, CA, nucleic acids, including inactive viruses. Therefore, the USA). All primers and probe were synthesized by Sangon Biotech. TCID50 assay is more valuable for evaluating the prepara- Co., Ltd (Shanghai, China). All data related to the primers and probe are shown in Table 1. A BLAST search was also conducted tion of live virus particles, theoretically. However, for all to verify the specificities of the primers and probe. this, if a reliable correlation is found between the above 2 methods, qRT-PCR may be possible to replace or par- RNA Extraction and Conventional RT-PCR tially replace the TCID50, which is more conducive to Viral total RNA of JEV vaccine strain SA 14-14-2 were extract- practical applications. In this study, a TaqMan probe- ed using InvitrogenTM TRIzol® Reagent (Life Technologies Corpo- based qRT-PCR analysis method was developed to mon- ration, Carlsbad, CA, USA) under the user guide. Viral RNA was reverse transcribed into cDNA. RT was carried out with Prime- itor the proliferation of JEV in BHK-21 cells real timely, ScriptTM1st Strand cDNA Synthesis Kit (TaKaRa, Beijing, China) and the results of this method were compared with the subsequently. The resulting cDNA was used as a template in the results of TCID50 method. This study provides a new ap- following PCR reactions. proach for studying the in vitro growth laws of JEV and virus detection during vaccine preparation. qRT-PCR Standard Plasmid Template Preparation PCR assay was carried out in a 20-μL volume containing 2 µL of cDNA template, 2 µL primers (each 0.2 μM), 10 µL Premix TaqTM (TaKaRa, Beijing, China), and 6 µL RNase-free water. Am- Materials and Methods plification began with a 7-min incubation at 95°C, followed by 40 cycles of denaturation at 94°C for 1 min, annealing at 56°C for Cells and Viruses 30 s, extension at 72°C for 30 s, and 1 cycle of final extension at Baby hamster kidney-21 cells (American Type Culture Collec- 72°C for 10 min. After examination by 1% (w/v) agarose gel elec- tion), JEV vaccine strain SA 14-14-2 (SINOLAND), PPV (porcine trophoresis, the amplified fragments were digested with BamHI parvovirus), PCV2 (porcine circovirus type 2), CSFV (classical and HindIII and inserted into pMDTM19-T-Vector (TaKaRa, Bei- swine fever virus), PRV (pseudorabies virus), PRRSV (porcine re- jing, China). The constructed plasmids were confirmed by PCR productive and respiratory syndrome virus), and TGEV (trans- and DNA sequencing (Sangon Biotech, China). The extracted missible gastroenteritis virus) were all kept in the College of Vet- plasmids were determined by OD260 optical absorption value in erinary Medicine, Northwest A & F University. All experiments NanoDrop 2000 spectrophotometer (Thermo Scientific, Waltham, related to egg drop syndrome virus were done in a P2 biosafety MA, USA) and diluted at 1.0 × 1010 copies/µL ultimately. laboratory and strictly carried out according to the Laboratory Biosafety Manual in the College of Veterinary Medicine, North- Fluorescent Quantitative PCR Assay west A & F University. The final volume of TaqMan Probe-based fluorescent quantita- tive PCR is 20 μL, which contains 10 μL 2× FastStart Universal 2 Intervirology 2021;64:1–7 Zhang/Luo/Teng/Xing/Guo/Zhang DOI: 10.1159/000510585
Color version available online Amplification plot 7.0 6.5 6.0 5.5 5.0 4.5 1.0 × 108 1.0 × 107 4.0 1.0 × 106 3.5 1.0 × 105 ΔRn 1.0 × 104 3.0 1.0 × 103 2.5 1.0 × 102 2.0 1.0 × 101 1.5 1.0 0.5 0 0 2 4 6 8 10 12 14 16 18 20 22 24 26 28 30 32 34 36 38 40 42 Cycle Fig. 1. The sensitivity of qRT-PCR. qRT-PCR amplification plot of 10-fold serial dilutions of standard positive plasmids DNA (from 1.0 × 108 copies/µL to 1.0 × 101 copies/µL). JEV, Japanese encephalitis virus. Probe Master (Roche), 10 μM upstream and downstream each bovine serum (FBS, Hyclone, Logan, UT, USA) and cultivated for primer 0.5 μL, 10 μM probe 1 µL, templates 1 μL, and RNase-free 24 h at 37°C in a 5% CO2 incubator routinely. And then, the cells water 6 μL. PCR cycling parameters were 94°C for 5 min, followed were infected with 0.1 mL JEV at a titer of 102 TCID50 in T-25 flasks by 40 cycles at 95°C for 15 s and 60°C for 1 min. for 1 h at 37°C. Standard Curve, Sensitivity, Specificity, and Reproducibility of Virus Collection the Assay After incubation, the cells were washed 3 times with PBS (pH To evaluate the sensitivity, 10-folds serially diluted standard plas- 7.2) to remove unbound virus particles and then maintained in mid DNA (from 1.0 × 108 copies/µL to 1.0 × 101 copies/µL) were used 5 mL mediums DMEM containing 2% FBS. At 0, 12, 24, 36, 48, 60, to perform the PCR. The results were compared with conventional 72, 96, and 120 h post infection (hpi), 500 μL culture supernate and RT-PCR. Meanwhile, to generate a standard curve of the assay, cell suspension were collected from every 3 samples after frozen 10-folds serially diluted standard plasmid DNA (from 1.0 × 108 cop- and thawed 3 times. ies/µL to 1.0 × 104 copies/µL) were used. The standard curve of JEV detection is established by taking the logarithm of the number of start- Determination of Virus Titer ing templates as the X-axis and the Ct value as the Y-axis as the regres- qRT-PCR assay and TCID50 determination were performed on sion curve. The specificity was determined using RNA/DNA extract- samples taken at different time points. According to the average ed from PPV, PCV2, CSFV, PRV, PRRSV, and TGEV, which were determination results, the proliferation curve of the virus was used as templates in parallel to evaluate the specificity of the assay. drawn, and comparative analysis was performed to calculate the For verifying the reproducibility, 3 different dilutions of the correlation coefficient. standard plasmid DNA (1.0 × 107 copies/µL, 1.0 × 106 copies/µL, and 1.0 × 105 copies/µL) were tested for 10 replicates and statisti- cally analyzed. Results Comparison of the Dynamic Proliferation of JEV in BHK-21 Cells Cell Culture and Inoculation Identification of Standard Positive Plasmids BHK-21 cells (inoculation concentration of 5.0 × 105 cells/mL) PCR products were analyzed by 1% agarose gel elec- were seeded in DMEM (Gibco, UK) supplemented with 8% fetal trophoresis, and a specific fragment of approximately Dynamic Proliferation of JEV Intervirology 2021;64:1–7 3 DOI: 10.1159/000510585
Color version available online Amplification plot 8.0 7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 1.0 × 107 ΔRn 3.5 1.0 × 106 1.0 × 105 3.0 1.0 × 104 2.5 1.0 × 103 2.0 1.5 1.0 0.5 0.442894 0 0 2 4 6 8 10 12 14 16 18 20 22 24 26 28 30 32 34 36 38 40 42 Cycle Fig. 2. Reproducibility of qRT-PCR. Amplification plot of plasmid DNA (from 1.0 × 107 copies/µL to 1.0 × 103 copies/µL). 1,500 bp was amplified, which was consistent with the is still a fluorescence curve of 1.0 × 101 copies/µL, indicat- expected results (online suppl. Fig. 1a; for all online suppl. ing that the detection sensitivity of the method can reach material, see www.karger.com/doi/10.1159/000510585). 1.0 × 101 copies/µL. The results of the sensitivity test are The constructed plasmid DNA was digested with BamHI shown in Figure 1. Under the same reaction system and and HindIII, and the band of interest of about 1,500 bp conditions for fluorescent quantitative PCR, only JEV- and the vector of plasmid 2,700 bp were excised (online positive standards showed positive signals, and other vi- suppl. Fig. 1b). Simultaneous sequencing of the recombi- rus samples controls were negative. nant plasmids revealed that the JEV E genetic fragment In this experiment, 5 concentrations (1.0 × 107, 1.0 × had been cloned into the T-vector. 10 , 1.0 × 105, 1.0 × 104 and 1.0 × 103 copies/µL, n = 3) of 6 plasmid DNA were selected as standard samples for re- Standard Curve peated determination (Fig. 2), and the results were ob- The qRT-PCR amplification was performed on a 10- tained by statistical analysis. As can be seen from Table 2, fold serial dilution of standard positive plasmids DNA the final actual measured values of the standards at initial (1.0 × 108∼1.0 × 101 copies/µL) as a template. The ampli- concentrations of 1.0 × 107, 1.0 × 106, 1.0 × 105,1.0 × 104, fication showed a good linear relationship, the standard and 1.0 × 103 copies/µL were 0.988 × 107, 0.933 × 106, curve equation is Ct = −3.336log (copy nr) +44.18, the 0.975 × 105, 0.930 × 104, and 0.898 × 103 copies/µL, re- correlation coefficient is 0.997, and the amplification ef- spectively. The coefficients are 8.40, 5.79, 2.77, 3.33, and ficiency is 99.3% (online suppl. Fig. 2). 3.34%, respectively. The determination result indicated that the method has good accuracy and reproducibility. Sensitivity, Specificity, and Reproducibility The analytical sensitivity of the assay was assessed Proliferation Profile of JEV on BHK-21 Cells through serial dilutions of standards of plasmids DNA BHK-21 cells were infected with 0.1 mL JEV at a titer (from 1.0 × 108 copies/µL to 1.0 × 101 copies/µL). There of 102 TCID50 and normal cells were used as control. The 4 Intervirology 2021;64:1–7 Zhang/Luo/Teng/Xing/Guo/Zhang DOI: 10.1159/000510585
Color version available online Color version available online 6 8 Virus RNA copies (copies/Ig¡¤0.1 mL–1) 7 Virus titer (TCID50/Ig¡¤0.1 mL–1) 5 6 4 5 3 4 3 2 2 1 Cell suspension Cell suspension 1 Culture supernate Culture supernate 0 0 0 12 24 36 48 60 72 84 96 108 120 0 12 24 36 48 60 72 84 96 108 120 Hours post infection, hpi Hours post infection, hpi Fig. 3. One-step proliferation curve of JEV on BHK-21 cells deter- Fig. 4. One-step proliferation curve of JEV in BHK-21 cells deter- mined by TCID50 assay. JEV, Japanese encephalitis virus; hpi, mined by qRT-PCR. JEV, Japanese encephalitis virus; hpi, hours hours post infection. post infection. Table 2. Reproducibility and recovery of the measurement of replicate standards Experiment Quantity, copies/µL 1.0×107 1.0×106 1.0×105 1.0×104 1.0×103 1 0.964 0.912 0.977 0.966 0.907 2 0.988 0.893 1.000 0.916 0.879 3 1.0137 0.995 0.947 0.909 0.922 Arithmetic mean 0.988 0.93 0.975 0.930 0.898 Standard deviation 0.083 0.054 0.027 0.031 0.030 Coefficient of variation, n (%) 8.40 5.79 2.77 3.33 3.34 SD = éê(d1 - x ) + (d2 - x ) + + (dn - x ) ùú / (n - 1) ; 2 2 2 ë û CV = S/X × 100%. dn is the measured value and x is the arithmetic mean value. CV, coefficient of variation; SD, standard deviation. morphological changes of the cells at 0, 12, 24, 48, 60, 72, and culture supernatant, the virus proliferated slowly 84, 96, and 120 h after challenged were observed, and the within 24 hpi. The virus proliferation rate increased rap- cytopathic images were collected. Cytopathic effect (CPE) idly subsequently within 24 hpi∼60 hpi, with the viral began to appear at 48 hpi, but it was not obvious. A small load increasing logarithmically. The viral titer reached number of tiny plaques were scattered on monolayer the highest level of 105.44 TCID50/0.1 mL in cell suspen- cells; at 60 h, the CPE was obvious, the cells shrunk, some sion at 60 hpi and 104.86 TCID50/0.1 mL in culture super- rounded and gathered, and the cell gap increased. Cells nate at 72 hpi, respectively. The peak of viral titer is 12 h mostly became round and began to fall off at 120 h. Large ahead in cell suspension than in culture supernate. After amounts of cells shed and disintegrated in large areas that, the content of JEV showed a decreasing trend up to moreover. 120 h, but the decline rate was slow. The dynamic curves qRT-PCR assay and TCID50 determination were per- of virus titer of JEV on BHK-21 cells were very similar in formed on samples taken at different times after virus in- both cell suspension and culture supernate. oculation, and the virus proliferation curve was drawn As shown in Figure 4, the amount of JEV presented a (Fig. 3, 4). As shown in Figure 3, in both cell suspension tendency of straight climb with the increase of hpi either Dynamic Proliferation of JEV Intervirology 2021;64:1–7 5 DOI: 10.1159/000510585
in cell suspension or in culture supernate. And the viral The proliferation curve determined by the 2 methods has load in culture supernate is less than that in cell suspen- a certain parallel relationship, but the quantitative PCR sion continuously. The virus RNA copies reached the (4 h) is faster and more sensitive than the TCID50 assay peak at 1.0 × 107.5 copies/µL and 1.0 × 105.6 copies/µL in (3∼4 days), and it is more suitable for rapid determina- cell suspension is and culture supernate, respectively. The tion of JEV proliferation titer real timely. The compre- peak appeared in cell suspension is 12 h ahead than in hensive analysis showed that the best time for receiving culture supernate. The virus RNA copies reduced slowly JEV proliferated on BHK-21 cells was at 60 hpi. Neverthe- after the limit value. Combining with Figures 3 and 4, it less, the peak of virus proliferation was closely related to can be seen that the uptrend and the peak of the prolif- various factors, the proliferation curve of different virus eration profile of JEV inoculated on BHK-21 cells mea- strains needed to be studied systematically. However, this sured by TCID50 determination are consistent with which study will provide technical support for the preparation measured by qRT-PCR assay. Meanwhile, the correlation of high-titer virus solution or production of JEV. coefficient between the quantitative copy number and the TCID50 data was r = 0.867 and r = 0.888 in the cell super- natant and cell suspension, respectively. Statement of Ethics Not applicable. There are no human and animal subjects in this study. Discussion qRT-PCR could be used for quantitative detection of Conflict of Interest Statement virus contained in a unit volume. However, it should be noted that the viral load measurement just reflected the The authors have no conflicts of interest to declare. amount of viral nucleic acid contained in the test and could not reflect the amount of live virus or intact virus particles. Virus titer is usually expressed as TCID50, which Funding Sources could reflect the number of viruses with biological activ- ity or function. The primitive and classical method for the This work was supported by the National Key Research and Development Program of China (grant numbers 2016YFD0500701), quantitative detection of JEV is to determine its TCID50. the Earmarked Fund for Modern Agro-industry Technology Re- However, its practical application is subject to many con- search System of China (grant numbers CARS-35), and the Special ditions. Fund for Henan Agriculture Research System (grant numbers The standard curve of qRT-PCR assay explored in this S2012-06-02). test showed a good linear relationship at 1.0 × 108∼1.0 × 101 copies/µL, with the correlation coefficient 0.997 and the amplification efficiency 99.3%, which provides basic Author Contributions data for precise analysis of virus replication in cells. Y.H.Z. planned and designed the research. F.L.Z. and J.L. fin- The proliferation dynamics of JEV on BHK-21 cells ished the experiments. M.T. and G.X.X. performed the data analy- determined by qRT-PCR and TCID50 assay showed that sis. J.Q.G. prepared the reagents used in the experiments. F.L.Z. the number of virions or virus titer of the cell suspension wrote the manuscript. All authors have read and approved the was significantly higher than that of the culture superna- manuscript. tant and reached the peak at first. This is because some cells contracted and fell off and entered into the cell su- References 1 Impoinvil DE, Ooi MH, Diggle PJ, Caminade pernatant after 24 hpi. Both of them reached the peak at C, Cardosa MJ, Morse AP, et al. The effect of vaccination coverage and climate on Japanese 60 hpi and then began to fall. However, the TCID50 value encephalitis in Sarawak, Malaysia. PLoS Negl decreased slightly after 60 hpi which may be because the Trop Dis. 2013 Aug;7(8):e2334. value measured by the qRT-PCR contained 3 types of vi- 2 Gao X, Liu H, Li X, Fu S, Cao L, Shao N, et al. Changing geographic distribution of Japanese ral nucleic acids, including live virus (infectious) nucleic encephalitis virus genotypes, 1935–2017. Vec- acids, inactivated viruses (non-infectious but antigenic tor Borne Zoonotic Dis. 2019 Jan;19(1):35–44. and immunogenic) nucleic acids, and nucleic acids of vi- 3 Chambers TJ, Hahn CS, Galler R, Rice CM. Flavivirus genome organization, expression, rion that have not yet completed assembly. While the and replication. Annu Rev Microbiol. 1990; TCID50 value only determined the titer of live virions. 44(1):649–88. 6 Intervirology 2021;64:1–7 Zhang/Luo/Teng/Xing/Guo/Zhang DOI: 10.1159/000510585
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