ONE HEALTH FOR A BETTER FUTURE - Report 2019 Emergency Centre for Transboundary Animal Diseases (ECTAD) Indonesia - FAO
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Annual Report 2019 Emergency Centre for Transboundary Animal Diseases (ECTAD) Indonesia ON E HE AL T H F O R A BE TT E R F UT U R E
Annual Report 2019 Emergency Centre for Transboundary Animal Diseases (ECTAD) Indonesia ONE HEALTH FOR A BETTER FUTURE Food and Agriculture Organization of the United Nations Jakarta, 2021
Citation FAO. 2021. One health for a better future - Emergency Centre for Transboundary Animal Diseases (ECTAD) Indonesia. Annual report 2019. Jakarta. The designations employed and the presentation of material in this information product do not imply the expression of any opinion whatsoever on the part of the Food and Agriculture Organization of the United Nations (FAO) concerning the legal or development status of any country, territory, city or area or of its authorities, or concerning the delimitation of its frontiers or boundaries. The mention of specific companies or products of manufacturers, whether or not these have been patented, does not imply that these have been endorsed or recommended by FAO in preference to others of a similar nature that are not mentioned. The views expressed in this information product are those of the author(s) and do not necessarily reflect the views or policies of FAO. © FAO, 2021 Some rights reserved. This work is made available under the Creative Commons Attribution-NonCommercial-ShareAlike 3.0 IGO licence (CC BY-NC-SA 3.0 IGO; https://creativecommons.org/licenses/by-nc-sa/3.0/igo). Under the terms of this licence, this work may be copied, redistributed and adapted for non-commercial purposes, provided that the work is appropriately cited. In any use of this work, there should be no suggestion that FAO endorses any specific organization, products or services. The use of the FAO logo is not permitted. If the work is adapted, then it must be licensed under the same or equivalent Creative Commons license. If a translation of this work is created, it must include the following disclaimer along with the required citation: “This translation was not created by the Food and Agriculture Organization of the United Nations (FAO). FAO is not responsible for the content or accuracy of this translation. The original [Language] edition shall be the authoritative edition. Any mediation relating to disputes arising under the licence shall be conducted in accordance with the Arbitration Rules of the United Nations Commission on International Trade Law (UNCITRAL) as at present in force. Third-party materials. Users wishing to reuse material from this work that is attributed to a third party, such as tables, figures or images, are responsible for determining whether permission is needed for that reuse and for obtaining permission from the copyright holder. The risk of claims resulting from infringement of any third-party-owned component in the work rests solely with the user. Sales, rights and licensing. FAO information products are available on the FAO website (www.fao.org/publications) and can be purchased through publications-sales@fao.org. Requests for commercial use should be submitted via: www.fao.org/contact-us/licence- request. Queries regarding rights and licensing should be submitted to: copyright@fao.org. FAO Indonesia has verified that all maps contained in the work conform to UN maps and accepts all responsibility in the event of reputational damage to FAO or FAO Member Countries as a result of inaccurate boundaries. Cover photograph A worker feeds layer chickens using a simple technology tool in a farm, Lampung Province.© FAO/Sadewa
iii Contents Message from Dr. Ir. Nasrullah, M.Sc 2.7 Strengthening education through field epidemiology on ECTAD work in Indonesia in 2019................................... v training program for veterinarians.........................12 Message from Dr. James McGrane Story from the field: Early detect and response to prevent on ECTAD work in Indonesia in 2019................................. vii rabies in Minahasa District..................................... 13 2019 FAO ECTAD work in numbers...................................... x Chapter 3. Efforts to control avian influenza along Chapter 1. Risk management for avian influenza, other poultry market chains and fighting antimicrobial zoonoses and emerging infectious diseases (EID) in resistance (AMR)................................................................... 15 Indonesia................................................................................. 1 3.1 Good farming practices for healthy poultry 1.1 Strengthen surveillance systems for zoonoses and production and reduced antimicrobial use (AMU).15 EID prevention, detection and response................. 1 3.2 Poultry farmers more aware to implement best 1.2. Avian influenza surveillance system in live bird practices on farm.................................................... 15 markets is crucial to monitor the development of AI 3.3 Results of the duck study on better duck farming viruses and support IVM Online bank data.............. 3 practices, biosecurity and management................16 1.3 Risk-based surveillance and outbreak investigation 3.4 Endemicity study to better understand AI circulation skills become the foundation for EID detection in in endemic areas..................................................... 17 Indonesia................................................................... 4 3.5 Multi-sectoral collaboration in fighting AI along 1.4 Indonesia’s DICs on their way to meet global poultry market chains............................................. 17 standards to detect zoonoses and EID.................... 4 3.6 Multi-sectoral collaboration to develop the national 1.5 Multi-sectoral risk assessment and risk mapping action plan on AMR (2020-24)................................ 18 capacity for zoonoses and EID................................. 5 Story from the field: Lampung poultry farmers provided Story from the field: Six Indonesian Disease Investigation healthy food for consumers................................... 20 Centers help accelerate COVID-19 testing............... 6 Chapter 4. Communications and outreach...................... 21 Chapter 2. Addressing zoonoses and EID at the animal- human-wildlife interface through One Health.................. 7 4.1 FAO-DGLAHS engagement with the media............22 2.1 One Health capacity building for zoonoses and EID 4.3 Increasing awareness of the threat of zoonoses and prevention and control............................................. 8 EID through television programs............................23 2.2 Increased community welfare through the use of 4.2 Showcasing animal health through the performing village funds for zoonoses and EID.......................... 8 arts........................................................................... 23 2.3 SIZE version 2.0 integrated infectious disease 4.3 Expansion of collaborative outreach by celebrating information sharing system...................................... 9 International Days................................................... 23 2.4 Fighting rabies in Bali.............................................. 10 4.4 Appreciating FAO-DGLAHS-USAID collaboration through the EPT-2 project...................................... 25 2.5 Responding to African Swine Fever (ASF)............... 10 2.6 The Indonesian Association of Veterinary Faculties (AFKHI) and Cinagara Training Center adopt OH approaches ............................................................. 11
© FAO/Sadewa Goverment’s animal health officers conduct interview to villagers in Gunung Kidul, Yogyakarta, during training of The Field Epidemiology Training Program for Veterinarians (FETPV) which is supported by FAO and USAID.
v Message from Dr. Ir. Nasrullah, M.Sc on ECTAD work in Indonesia in 2019 programs, we are expanding our Taking this opportunity, I would like portfolio to strengthen capacities to express my appreciation and and preparedness to prevent and gratitude to FAO ECTAD Indonesia, respond to other zoonotic diseases which has supported the efforts through the Emerging Pandemic of the DGLAHS in preventing and Threats (EPT-2) program. controlling zoonoses, especially AI and rabies, but also emerging The DG PKH Ministry of Agriculture infectious diseases and its is a technical agency, which is problems with regard to AMR. For responsible for increasing livestock the future, I hope we can continue production to meet the demand to advance this cooperation to for animal protein from the achieve an Indonesia that is free Indonesian people, and also for from the threat of animal diseases. improving animal health to prevent zoonoses (for example, health threats to humans from animal F populations). DGLAHS receives irstly, let us express our support and assistance from FAO gratitude to the presence ECTAD Indonesia in preventing and of God Almighty for the controlling animal diseases. Dr. Ir. Nasrullah, M.Sc completion of the 2019 Annual Director General of Livestock and Animal Report of the Directorate General The FAO ECTAD 2019 Annual Health Services, Ministry of Agriculture of Livestock and Animal Health Report contains information related Services, Ministry of Agriculture to the activities DGLAHS and FAO (DGLAHS) - FAO ECTAD Indonesia. in dealing with the threat of an The Ministry of Agriculture’s emerging pandemic, antimicrobial Directorate General of PKH has resistance (AMR), emerging been working with FAO ECTAD since infectious diseases and zoonoses. 2006, right after Indonesia was hit We are also working together to by Avian Influenza (H5N1) outbreak. increase livestock and poultry production to ensure food security Over the past ten years, the in Indonesia, discussing successes, Government of Indonesia’s challenges and solutions that comprehensive efforts have require active participation from succeeded in reducing the number the community, especially for the of HPAI cases significantly. Building EPT-2 program. on the success of previous
© FAO/Sadewa FAO ECTAD Indonesia Team Leader, Dr. James McGrane, is interviewed by journalist during the peak event of World Antibiotics Awareness Week 2019 in Lampung.
vii Message from Dr. James McGrane on ECTAD work in Indonesia in 2019 environment can only be solved by the DGLAHS is raising awareness working together across disciplines of AMR, and building greater and sectors. government field surveillance and laboratory detection capacity. Under the USAID Emerging Field studies have been conducted Pandemic Threats 2 (EPT-2) to quantify antimicrobial usage program, the FAO Emergency (AMU) in the poultry sector in an Centre for Transboundary Animal attempt to promote the reduced Diseases (ECTAD), working in and prudent use of antibiotics on collaboration with the Directorate poultry farms. General of Livestock and Animal Health Services (DGLAHS) has This year marks the final year of strengthened the capacity of the EPT-2 program, however FAO the Government of Indonesia to ECTAD will continue to support prevent, detect, and respond to the DGLAHS to prevent, detect, emerging infectious diseases and and respond to EID and priority T zoonoses. zoonoses under the new Global he continuing coronavirus Health Security Programme in Middle-East Respiratory Under the One Health umbrella, 2021. Syndrome (MERS) outbreak the FAO ECTAD EPT-2 program in Saudi Arabia, Ebola disease in works closely with the Ministry FAO ECTAD wishes to thank our Africa and particularly the current of Agriculture, Ministry of Health, technical partner the Directorate COVID-19 global pandemic remind Ministry of Environment and General of Livestock and Animal us of the importance of improving Forestry, local government services, Health Services, and our donor Governments’ capacity to detect private sector partners, and civil the US Agency for International and respond to emerging infectious society organizations to prevent, Development for their continuing diseases (EID) and priority detect and respond to zoonoses support. The guidance and zoonoses. and emerging infectious diseases, support of the FAO Representative such as COVID-19. in Indonesia is also gratefully With rapid population growth, acknowledged. globalization, and environmental This cross-sectoral collaboration degradation, health threats have demonstrates the comprehensive become more complex and cannot technical, multi-disciplinary, and be solved by one sector alone. The proactive approach needed to One Health approach leverages address the other major global and expands the hypothesis that health threat of our time – antimicrobial resistance (AMR). Dr. James J. McGrane problems impacting the health of humans, animals, and the FAO ECTAD, in collaboration with FAO ECTAD Indonesia Team Leader
viii Annual Report 2019 One Health for a better future - Emergency Centre for Transboundary Animal Disease Indonesia SURVEILLANCE LABORATORY FAO ECTAD AI live bird market (LBM) All animal health laboratories milestone surveillance is adopted and achieved the global standard implemented in all Disease for biosafety & biosecurity Investigation Centers POULTRY PRODUCTION AND VALUE CHAIN 2019 14 layer farms in Lampung Province and one layer farm in Central Java province get food hygiene and sanitary (NKV) certificate from the government as an achievements of the implementation 3-zone biosecurity practices on farm ANTIMICROBIAL SURVEILLANCE RESISTANCE 2018 National AMR surveillance for broiler poultry established and adopted by government AI LBM surveillance is funded by the government ANTIMICROBIAL SURVEILLANCE RESISTANCE 2017 Multi-sectoral National Action AI live bird market (LBM) Plan of AMR 2017 – 2019 surveillance is adopted and developed including implemented in all Disease interventions for the livestock Investigation Centers and animal health sector. POULTRY PRODUCTION SURVEILLANCE AND VALUE CHAIN 2016 3-zone biosecurity became one of the requirements to receive government food hygiene and sanitary (NKV) Surveillance expanded to swine and whistling ducks for Influenza and certification as a guarantee of food Emerging Infectious safety from poultry products Diseases in kept deer SURVEILLANCE 2015 Triangulated surveillance launched in North Sulawesi which has a close interface between wildlife (bats), livestock, and human
ix LABORATORY FIELD EPIDEMIOLOGY ONE HEALTH IVM Online is fully funded and Nineteen animal health The Government of Indonesia has officially adopted SIZE operated by the government officers graduated as the 2.0 and acknowledged the platform as a national flagship first cohort of FETPV and innovative research priority in its 2020-2024 intermediate level course. medium-term development plan, to be implemented at the national, provincial and district levels. POULTRY PRODUCTION ANTIMICROBIAL ANTIMICROBIAL AND VALUE CHAIN RESISTANCE RESISTANCE Nine local governments in the The implementation of multi sectoral Based on FAO’s survey on antimicrobial usage in Greater Jakarta area adopted market National Action Plan of AMR 2017 – broilers, DGLAHS MoA issued a regulation to biosecurity intervention and healthy 2019 evaluated and developed a prohibit the use of the antibiotic colistin to chicken meat campaign in the multi sectoral National Action Plan of reduce the development of colistin antimicrobial poultry market chain AMR for 2020 – 2024. resistance in the livestock sector LABORATORY ONE HEALTH ONE HEALTH New Avian Influenza challenge The village fund program from Ministry of Eleven Indonesian Faculties of Veterinary strains for local Avian Influenza Village added the OH capacity building on Medicine adopted One Health teaching vaccine production identified community empowerment to increase early materials into their lectures. The Cinagara through the Influenza Virus report and early detection for OH EID & animal health training center adopted One Monitoring (IVM) zoonoses into the government budget. Health modules for animal health officers. FIELD EPIDEMIOLOGY ONE HEALTH DGLAHS MoA established A wildlife health information system Indonesia’s first Field (www.sehatsatli.menlhk.go.id) Epidemiology Training developed as a platform for data Programme for collection on wildlife surveillance in Veterinarians (FETPV). national and local governments. ONE HEALTH Three ministries (MoH, MoEF, and Kemenko PMK) signed the Bogor Declaration on capacity building and PREVENT information sharing for the prevention and control of zoonoses and EIDs. DETECT RESPOND
x Annual Report 2019 One Health for a better future - Emergency Centre for Transboundary Animal Disease Indonesia 2019 FAO ECTAD work in numbers Activities North West Kalimantan Sumatera Riau Central Kalimantan N South Kalimantan North Sulawesi West Sumatera South Sumatera Lampung Bangka Belitung Maluku Banten DKI Jakarta East Central Java Nusa Tenggara West Java DI Yogyakarta Bali East Java Maps: https://freevectormaps.com/indonesia, 2020 Output activities (shown by colors) Output A Output C Output E Laboratory and surveillance Reduction of HPAI persistence One Health (OH) workforce and spread in poultry industry development Output B One Health (OH) EID and zoonoses Output D Output F prevention and control Quality improvement of marketing Emergency preparedness processes to reduce pathogen and response spill over events Magnitude of activities
xi Type of Meeting (89) Farmer Training (4) activities Mentoring (7) Seminar (21) in 2019 Workshop (30) Field Visit (37) Training (43) Others (79) 310 activities in total during 2019 Number of A Laboratory 395 participants A Surveillance 123 One Health (OH) EID and zoonoses B prevention and control 485 Reduction of HPAI persistence C and spread in poultry industry 320 Quality improvement of marketing processes D to reduce pathogen spill over events 143 Antibicrobial resistance/usage D (AMR/AMU) 195 E One Health (OH) workforce development 41 F Emergency preparedness and response 64 Male Female
© FAO/Sadewa Deers at captive breeding in Taman Hutan Rakyat, Lampung. T he prevention and control of Zoonosis and EID’s Targeted surveillance of high-risk environments and rely on the early detection of the causal agent of animals at high risk of contracting zoonoses, and EIDs, the disease. Early detection of these pathogens including livestock, farmed wildlife and migratory birds, plays an important role in the policy making for disease is one of the pillars in achieving rapid detection of the prevention, especially for control and mitigation. diseases. Therefore, having well equipped laboratories with the capacity to detect Zoonosis and EID’s in a timely manner is pivotal for disease risk management in Indonesia.
1 Risk management for avian influenza, other zoonoses and emerging infectious diseases (EID) in Indonesia 1.1 Strengthen surveillance namely North Sulawesi, Gorontalo, Influenza, corona and paramyxo systems for zoonoses West Sulawesi, South Sulawesi, and viruses were detected using the Southeast Sulawesi. PREDICT PCR Protocols from livestock and EID prevention, samples at high-risk interface areas. detection and response Since 2017, livestock triangulated Further characterization using genetic surveillance samples have been sequencing was commenced in 2019 An integrated and strengthened tested for five potential emerging to confirm whether the detected surveillance system and laboratory virus families (corona virus, paramyxo viruses are members of the three capacity are essential for the early virus, influenza virus, flavi virus and virus families (influenza, corona and detection of EID that might spread from filo virus) at three animal health paramyxo) investigated. To date, the wildlife to livestock or from wildlife to diagnostic laboratories (DIC Maros, analyses are still continuing. humans. DIC Denpasar, and DIC Lampung). Indonesia, as a country with rapid population growth, high globalization, and rich biodiversity is regarded as one of the emerging infectious disease (EID) hotspots in Asia. The government is now moving forward to increase surveillance capacity to detect potential EID in high risk areas that have close interface between wildlife, livestock and humans. Bats populations are widespread in Indonesia, especially in Sulawesi Island, which is home to an exotic array of wildlife species. Many people in Sulawesi hunt and eat fruit bats to be served as exotic food, or use bats in traditional medicine. However, bats are recognized as an important reservoir of zoonotic viruses of different families. This has brought FAO, the Directorate General of Livestock and Animal Health Services (DGLAHS), DIC Maros and the PREDICT2 project together to develop and implement triangulated surveillance in five high risk provinces, Chain of disease transmission originating in bats.
2 Annual Report 2019 One Health for a better future - Emergency Centre for Transboundary Animal Disease Indonesia Wild birds are recognized as and domestic poultry, livestock and natural habitat but also at high-risk reservoirs of many influenza viruses. humans in the wetlands, poultry interfaces with domestic poultry. Hulu Sungai Utara district, South markets and duck collecting areas. However, results showed that the Kalimantan Province is a stopover viruses carried by the wild birds In 2019, FAO and DIC Banjarbaru area for one wild bird species, were not highly pathogenic viruses. conducted joint risk analyses to whistling duck (Dendrocygna arcuate These findings provided a better support whistling duck surveillance / Belibis). Whistling duck have understanding of the ecology of and assess the risk of avian economic value for the communities AI and guided stakeholders to influenza (AI) in the whistling duck in Hulu Sungai Utara, where it is sold develop risk assessments and population. Initial results revealed as duck meat. This behaviour leads surveillance systems for AI in wild that AI virus was detected in duck to close contact between wild birds bird population. populations, not only in their Deer surveillance Box 1.1 In some parts of Lampung – southern part of Sumatra Island, people keep deer in captive breeding farms along with their livestock. This unique interface may have the potential to transfer diseases from wild deer to livestock and humans. Lampung has numerous wildlife conservation areas with large livestock production farms close by. With growing deforestation, interfaces between wildlife and domestic livestock will only increase. Deer surveillance was conducted with multi-sectoral partners from the animal and wildlife sectors at local and national level, including the Directorate General of Livestock and Animal Health Services, Ministry of Agriculture, the Directorate General Biodiversity, Ministry of Environment and Forestry, Lampung Disease Investigation Center (DIC), Lampung Biodiversity Conservation Agency, the Indonesia Institute of Sciences (LIPI), and Lampung University. In 2019, deer samples were tested at DIC Lampung for five target emerging virus families (Herpes, Paramyxo, Corona, Bunya, and Rhabdo) using the PREDICT Protocols for infectious disease detection, as well as testing for the presence of antibody against tuberculosis and paratuberculosis through ELISA serological testing. The final results were still pending in July 2020. This surveillance demonstrated concrete One Health action and built multisectoral partnerships to jointly understand the potential risks of pathogen spill-over from wildlife (deer) to livestock and humans © FAO/Sadewa © FAO/Sadewa Anesthetized deer had their blood samples taken by veterinary officers from DIC Lampung (left). Spotted deer (Axis axis) . Spotted deer in a captive cage (right)
3 1.2. Avian influenza surveillance system in live bird markets Chapter 1 is crucial to monitor the development of AI viruses and support IVM Online bank data From 2005 until the present, avian infectious diseases (eid) in indonesia Risk management for avian influenza, other zoonoses and emerging influenza (AI) viruses have continued to evolve and change their genetic and antigenic characteristics; this should be a reminder to Indonesia to stay alert for emerging influenza viruses. FAO and DGLAHS-MoA have been conducting surveillance in Live Bird Markets (LBM) in high-risk areas in Indonesia since 2009. LBM surveillance allows the DGLAHS to © FAO/Sadewa © FAO/Sadewa monitor the evolutionary dynamics of AI viruses, improve early detection of AI HxNx virus subtypes and monitor overall highly pathogenic avian influenza (HPAI) control in the country. AI epidemiological risk Belibis (left) and swine (right) surveillance activities. assessment information gathered at LBMs has guided Government and Swine, also play an important role market stakeholders to mitigate the in the ecology of influenza viruses potential risk of HPAI through an because they are susceptible LBM risk reduction program and a Findings on H1N1 strengthened layer flock vaccination to viruses of both the avian and viruses in pigs mammalian lineages and may serve program in upstream poultry prompted stakeholders production areas. as a ‘‘mixing vessel’’ for different to recognise the influenza viruses leading to re- importance of SIV In 2019, DGLAHS-MoA fully adopted assortment and host adaptation. surveillance, to the LBM AI surveillance system, In 2019, FAO together with DIC understand the potential which was developed and promoted Medan further supported the risk of SIV among pig by FAO, in Greater Jakarta, North sustainability of the swine influenza populations, and its co- Sumatra, East Java, Central Java, virus surveillance program, by circulation with human South Sulawesi, Lampung and further developing both SIV viruses so that potential DIY Yogyakarta. Those provinces surveillance and SIV isolation re-assortment events are now conduct routine surveillance capacity. Activities were based on the rapidly identified including sample collection and initial results of SIV surveillance in shipment, and laboratory diagnosis. 2017, which showed the detection of LBM surveillance also supports influenza A (H1N1) in pig populations the databank of Influenza Virus in North Sumatra. Monitoring (IVM) Online – a platform
4 Annual Report 2019 One Health for a better future - Emergency Centre for Transboundary Animal Disease Indonesia that enhances the capacity of government in developing standardized In 2019, FAO supported the DGLAHS- DICs to monitor and characterize RBS designs with appropriate MoA to improve laboratory quality circulating H5N1 HPAI viruses. The epidemiological approaches. assurance by developing and IVM Online platform continues to documenting 48 disease diagnosis In August 2019, FAO and DGLAHS, advance in tracking the evolution standard operating procedures (SOP) together with FAO HQ Rome and of influenza viruses in Indonesia, and 14 quality control SOP. These SOP FAO RAP Bangkok, formed a joint matching vaccine seed strains to are used to guide quality control at team to evaluate Indonesian currently circulating viruses, and DICs to detect animal diseases. These animal disease epidemiology and recommending effective actions to SOP enabled four DICs (Bukittinggi, surveillance capacities using the key stakeholders in producing local Lampung, Wates, and Banjarbaru) to FAO Surveillance Evaluation Tool vaccines to control AI in poultry. allocate 2020 budget to pursue ISO (SET) and the Epidemiology Mapping 17043 international accreditation that 1.3 Risk-based surveillance Tool (EMT). These tools identified guarantees the quality of proficiency and outbreak strengths, areas for improvement testing. and made recommendations to investigation skills build better capacity in Indonesia. DIC Wates, as the IVM Online focal become the foundation Currently, DGLAHS MoA has taken point in Indonesia has allocated for EID detection in up some of the recommendations IDR 900 million (USD 6 ,000) for the Indonesia to improve their surveillance and continuation and maintenance of the epidemiology capacity in 2020 and IVM Online platform in 2020. Through In 2019, FAO together with MoA 2021. FAO advocacy, the budget will be conducted training on risk-based used to sustain IVM-related activities, surveillance (RBS) and produced 1.4 Indonesia’s DICs on such as server maintenance, some practical RBS guidelines with DIC their way to meet IVM Network meetings, and limited Lampung, DIC Banjarbaru, DIC global standards to reagent supply. With improved Subang and DIC Denpasar. These activities helped strengthen animal detect zoonoses and capacity to diagnose animal EID diseases, the DIC Wates laboratory health officers’ skills and data is preparing for an international analysis capacities and to support the assessment as a potential ASEAN reference laboratory for avian influenzas. The quality improvement of outbreak investigation In July 2019, FAO, in collaboration with the Australian Animal Health Laboratory (AAHL) conducted a 17% 22% training course on tissue culture technology for virus isolation and Knowledge training diagnosis in DIC Medan, North and skills outcomes Sumatra. Thirteen laboratory staff of enhanced DIC Bukittinggi, DIC Medan and AAHL participated in a pre-training session, 81% while 17 other laboratory staff from eight DICs, Pusvetma, BPMSPH and of the trained Air Langga University participated in participants conducted the diagnostic training delivered by disease outbreak AAHL scientists. The training course investigations since they completed the training improved DIC laboratory diagnostic capacity for viral diseases, especially viral diseases of swine.
5 Four DICs now have Chapter 1 better tissue culture facilities, with the ability to grow and detect H1N1 influenza virus, Bovine Viral Diarrhoea (BVD), Infectious Bovine Rhinotracheitis (IBR), infectious diseases (eid) in indonesia Risk management for avian influenza, other zoonoses and emerging Classical Swine Fever Low Med High Very (CSF) and African Swine High Fever (ASF) 1.5 Multi-sectoral risk assessment and risk mapping capacity for zoonoses and EID Multiple ministries and universities Very Low Med High Very produced risk maps that can be used Low High to effectively communicate disease Risk maps on Leptospirosis (above) and Nipah (below) that combines data from the human, emergence risk. animal and environmental health sectors. (source: FAO, MoA, MoH, MoEF. 2019) To strengthen disease emergency preparedness and management These trainings produced risk maps North Sumatra. The AHRA revealed systems at different levels of on Leptospirosis, Nipah, Swine that ASF had most likely already government services in Indonesia, Influenza, and Rabies. Two risk maps been introduced into North Sumatra a series of training workshops were (Leptospirosis and Nipah) have since August 2019 via swill feeding conducted in 2019, in conjunction already been updated with national practices on pig farms in the Medan with the Coordinating Ministry for level data. This informed policy and area, close to the international Human Development and Cultural strategic decision makers on how seaport of Belawan, from where Affairs, Ministry of Agriculture, to safeguard human, animal and ships’ garbage is regularly collected Ministry of Health, Ministry of environment health. In addition, to feed pigs. Environment and Forestry, Ministry the technical and spatial analysis of Home Affairs, Indonesia’s National skills have been adopted to support The AHRA results helped to improve Disaster Management Agency, GoI report development. Now, this stakeholder’s understanding and Geospatial Information Agency, process is being continued for other critical thinking on the risk of ASF Agency for the Assessment and priority animal diseases. outbreaks occurring in the area. It Application of Technology (BPPT), also provided scientific evidence and Melbourne University, to To put their skills into practice, to be used by decision makers to develop and implement zoonoses a scenario-based workshop and formulate actions and a programme and EIDs risk mapping in the most qualitative animal health risk to mitigate the risk of ASF spread in effective way. assessment (AHRA) was conducted Indonesia as part of strengthening to respond to the emergence of disease emergency preparedness African Swine Fever (ASF) in Medan, and management.
6 Annual Report 2019 One Health for a better future - Emergency Centre for Transboundary Animal Disease Indonesia Story from the Field Six Indonesian Disease Investigation solutions. With previous experience in the control of avian influenza Centers help accelerate COVID-19 testing outbreaks in 2006, DICs are able to support public health laboratories to meet the massive demand for As the COVID-19 epidemic rages Ministry of Health (MoH) referral COVID-19 testing. on in Indonesia, the government laboratories by preparing six out of “Since 2006, I have participated eventually increased the number eight Disease Investigation Centers in Avian Influenza bio-risk of laboratories allowed to test for (DICs) to test human samples for management training from FAO. the SARS-CoV-2 virus, the cause COVID-19. With that capability and some fast of Coronavirus disease. DGLAHS- adjustments in the laboratory, To minimize the impact of this MoA has stepped up its One myself and 6 other staff in DIC rapidly spreading virus, a One Health collaboration to support Bukittinggi received authorization Health approach is one of the from the MoH to test for COVID-19 and became the second laboratory in West Sumatera to conduct 100 COVID-19 samples per day,” said Drh. Yuli Miswati, M.Si, Intermediate Veterinary Medicine DIC Bukittinggi. FAO ECTAD assistance, funded by the USAID over the past fourteen years has strengthened the capacity and capability of DICs to detect zoonotic and infectious diseases in animals, through comprehensive training on laboratory biosafety and biosecurity, quality assurance, risk mitigation, and procedures standardization. FAO ECTAD and USAID continue to work with DGLAHS MoA and DICs to provide technical advice and guidance on harmonization of test protocols and bio-risk management (biosafety and biosecurity). This support aims to assist with validation of test results © MoA and to minimize the danger to laboratory workers, and maintain the biosecurity of the specimens MoA DIC Bukittinggi laboratory staff testing human samples for COVID-19 tested.
2 Addressing zoonoses and EID at the animal- human-wildlife interface through One Health © FAO/Sadewa A group of stray dogs roaming the Lakey beach, Dompu, West Nusa Tenggara. Z oonoses and EID control globally is moving This program is in line with Presidential Instruction towards full adoption of the One Health approach. No. 4/2019 on improving Government coordination One Health is a collaborative effort of health and communication at national, provincial, district practitioners (veterinarians, medical doctors, public and village level to prevent, detect and respond to health officers, epidemiologists, ecologists, toxicologists, disease outbreaks and Ministry of Internal Affairs (MoIA) environmentalists and others) to protect public health, Regulation No. 101/2018 on non-natural disaster animal health, and the environment from emerging and minimum service standards (SPM) for districts/cities in re-emerging diseases. Indonesia. The FAO Emergency Centre for Transboundary Animal Guidelines, integrated protocols, and a strategy for One Diseases (ECTAD) Indonesia has paved the way for Health implementations in Indonesia are being drafted One Health capacity development across the different to provide a strong foundation for the sustainability of sectors working at the human, animal and environment the One Health approach. health interfaces.
8 Annual Report 2019 One Health for a better future - Emergency Centre for Transboundary Animal Disease Indonesia 2.1 One Health capacity building for zoonoses and EID prevention and control In 2019, twenty-nine districts in West Nusa Tenggara, East Nusa Tenggara, and Bali provinces have been trained on © FAO/Sadewa One Health approach as preparedness against zoonoses and EID threats. One Health capacity building has become a crucial part of responding to zoonoses and EID threats. Outbreak investigation, information A group of participants practice outbreak investigation as a task in One Health training. sharing, response and emergency preparedness are important to At district level, the Boyolali District range of activities as long as they are prevent, detect and respond to Health and Livestock Service in line with village needs. emerging threats. Offices also allocated local budget The DGLAHS and FAO coordinated to continue the OH program. This Since the beginning of the with the Ministry of Villages, was followed by local government emerging pandemic threats (EPT-2) Disadvantaged Regions and in Serang District implementing programme, DGLAHS and FAO have Transmigration (MoVDRT) to similar capacity building, using avian implemented a series of capacity use village funds to support influenza and rabies as training building activities on the One Health the development of field officer models. approach. These training events capacities to prevent and control of have strengthened the competencies One Health implementation zoonoses and EID in four pilot One of field veterinary service officers, guidelines to prevent and control Health implementation districts in surveillance officers and wildlife zoonoses and EID were endorsed Indonesia. personnel across the three sectors – and launched by the coordinating The use of village funds is prioritized agriculture, health and environment ministry and technical ministries in to finance the implementation of & forestry. September 2019. This document is programs and activities in village used as a One Health reference at In 2019, DGLAHS-MoA conducted development, village community provincial and district level. capacity building in three provinces: empowerment, cross-sectoral West Nusa Tenggara, East Nusa 2.2 Increased community priority activities, and to improve Tenggara, and Bali provinces. This welfare through the public services. In 2019, FAO, MoA year (2020), the Ministry of Health and MoVDRT completed practical use of village funds for guidelines to guide animal health allocated state budget to support OH zoonoses and EID capacity building in the catchment officers on village fund usage and areas of Makassar, Semarang, Local government and village step by step work with village Denpasar, and Bogor. FAO provided authorities unite to use village funds to communities in four districts. These technical inputs and facilitators in combat zoonoses and EID. guidelines support the existing each of these locations. In addition, guideline from the Ministry of Health DGLAHS and FAO have notedd that to convince village authorities to the MoEF committed state budget not all districts governments have utilize village funds to improve to cover training on zoonoses sufficient budget to sustain zoonoses zoonoses prevention and control and EID surveillance in wildlife at and EID prevention and control in public health and animal health national parks and natural resource programs, however, funds are centers. conservation centers in Sumatra available at village level to support a and Java.
9 Twelve village governments in (BPPT), the Coordinating Ministry for using individual ministry databases Boyolali and Minahasa districts Human Development and Culture (iSIKHNAS-MoA, SKDR-MoH and have allocated IDR 10 million from (Kemenko PMK), MoA, MoH, and SehatSatli-MoEF). A survey in four OH Chapter 2 their village budgets to educate MoEF developed an integrated pilot areas has shown that less than and support cadres to provide early OH information sharing platform, 10% of zoonoses cases were ever detection, early reporting, response called SIZE Ver 2.0 “Sistem Informasi reported and that response times and public awareness of zoonoses Zoonoses dan EID versi 2.0”. were more protracted averaging and EID. about 14 days prior to SIZE 2.0 SIZE 2.0 is a platform that facilitates implementation. 2.3 SIZE version 2.0 data sharing and communication through One Health Addressing zoonoses and EID at the animal-human-wildlife interface integrated infectious amongst surveillance/information Over the past year, FAO, BPPT, systems of the public health, Kemenko PMK, MoA, MoH, and disease information animal health and wildlife health MoEF improved the capacity of sharing system sectors. This platform also supports 219 field officers and 32 master SIZE 2.0 improves coordination and related ministries to analyse data trainers from the three sectors by collaboration between different sectors, and produce information rapidly conducting serial training on SIZE shortens response times to zoonoses and accurately to make decisions application and a field trial in four cases, and increases the effectiveness of to prevent and control targeted One Health districts in Indonesia, information and data sharing between zoonoses and EID. namely Minahasa in North Sulawesi, sectors. Ketapang in West Kalimantan, Before this platform was developed, Boyolali in Central Java and Bengkalis Under the umbrella of Presidential field officers of the three sectors in Riau. Instruction “Inpres” No. 4/2019, shared zoonoses data and FAO, the Agency for the Assessment information informally and manually The Government of Indonesia and Application of Technology (via WhatsApp Groups and logbooks) has officially adopted SIZE Ver 2.0 and acknowledged the platform as a national Conventional Reporting SIZE 2.0 Reporting flagship and innovative research priority in its 2020-2024 medium-term development plan (RPJMN), SKDR to be implemented at the Android national, provincial and 2.0 Web district levels. Integrated reporting Report recipients (Information sharing Based on the survey, SIZE (Officers and between officers and officials in ministries) officials in ministries) 2.0 improved field health officers’ coordination and SKDR communication capacity to report zoonoses by more than 80% in four pilot areas. Field health officers Zoonoses effectively responded to suspected Field case Field zoonoses cases, within officers officers short response windows (on average less than two Case datas Whatsapp group Marks: days) and in real-time. (Information sharing apps based reporting public health sector (manually inter-sectoral officers) ceonventional reporting animal health sector compile) environment health sector
10 Annual Report 2019 One Health for a better future - Emergency Centre for Transboundary Animal Disease Indonesia 2.4 Fighting rabies in Bali rabies hotspots and resulted in A rabies awareness campaign was the selection of priority villages for also conducted for elementary Bali has been endemic for rabies since sweeping vaccination. school students, dog-owning 2008. Collaboration of veterinarians communities, and maize farmers. and human health doctors and In 2019, almost 2,500 dogs were DGLAHS-FAO also supported paramedics is needed to respond to vaccinated in sweeping vaccination technical facilitation of a MoH / rabies cases using the One Health exercises in six key districts in Bali. WHO risk assessment in five districts approach. The local government together with on Sumbawa Island, NTB – Bima DGLAHS and FAO also developed Bali has a large dog population City, Dompu, Sumbawa, Bima, and risk maps and trained 12 local that lives closely alongside local Sumbawa Barat. mentors, who will supervise the 2020 communities and are welcomed Bali mass dog vaccination campaign. 2.5 Responding to African and integrated into daily activities on the island. However, this close DGLAHS and FAO assisted the Swine Fever (ASF) interaction with dogs can cause Dompu District local government, During current animal health disease transfer to humans, Sumbawa Island, West Nusa emergencies in Indonesia, emergency particularly rabies. Tenggara (NTB) where a new preparedness and response to incursion of rabies occurred in 2019. zoonoses and EID has to be improved In a bid to optimize the rabies Rabies has now become endemic eradication program, DGLAHS and significantly. in many districts of the island. FAO provided technical support DGLAHS-FAO responded to the African Swine Fever (ASF) is a and developed a strategy for rabies outbreak by conducting training on contagious viral disease that affects control in Bali. DGLAHS-FAO working dog vaccination and rapid response pigs and wild boars with a near 100 closely with local government including integrated bite case percent fatality rate. Even though analyzed data on rabies cases and management for veterinarians and ASF is not transmissible to humans, vaccination levels, which identified human health staff in NTB. this alarming disease has negatively © FAO/Sadewa © FAO/Fakhri Mass dogs vaccination in Bali (left) and East Nusa Tenggara (right).
11 impacted the Indonesian economy and the livelihoods of pig producers and traders along the food chain. Chapter 2 DGLAHS-FAO conducted a scenario- based workshop and qualitative Animal Health Risk Assessment (AHRA) of ASF in Medan, North Sumatra, where the disease had most likely already been introduced through One Health Addressing zoonoses and EID at the animal-human-wildlife interface in August 2019 via swill feeding practices on pig farms close to Belawan international seaport. These initial AHRA results provided scientific evidence to be used by decision makers to formulate actions © FAO/Sadewa and a program to mitigate the risk of ASF as part of strengthening disease emergency preparedness and management. Recognizing the threat of ASF in Indonesia, in December 2019 An animal health officer take care of blood sampels while the others take it from a pig. The activity is part of training on disease control in swine. FAO sent a Discussion Paper on “Approaches to Minimizing the Risks and Impacts of African Swine Fever training of 45 animal health officers of training modules and teaching in Indonesia”. FAO also contributed from all districts in Timor Island – materials. The modules and to the development of DGLAHS ASF East Nusa Tenggara. materials involve OH master trainers strategic prevention and control to deliver the training. plans and policies and identification 2.6 The Indonesian of provinces with large pig Association of AFKHI and the Cinagara training populations, which had a high risk of center have committed to continuing Veterinary Faculties the One Health capacity building ASF introduction. (AFKHI) and Cinagara program as part of their own After participating in the training Training Center adopt programs. on ASF control, 46 district animal OH approaches health service officers from Timor In 2019, 11 Indonesian Faculties of Island, part of East Nusa Tenggara Eleven Indonesian Faculties of Veterinary Medicine incorporated province that shares land border Veterinary Medicine, members of AFKHI the teaching materials (Antimicrobial with Timor Leste, have improved adopted One Health teaching materials Usage / Resistance (AMR/AMU) and their knowledge and skill on ASF into their lectures. The DGLAHS BBPKH- poultry health improvement using prevention, detection and response. Cinagara animal health training center the OH approach) into lectures to adopted One Health modules for enrich their curricula. The Cinagara In November 2019, DGLAHS, FAO animal health officers. training center has internalized the and the Animal Health Expert materials and started implementing commission developed ASF Control A sustainable capacity building thematic training on zoonoses and Guidelines “Kesiagaan Darurat program on prevention and control EID using the OH approach. So far, it Veteriner Indonesia – KIAT VETINDO: of zoonoses and EID using the has been implemented in Minahasa. ASF”. In the following month, One Health approach has driven DGLAHS-FAO completed ASF control DGLAHS-FAO to produce a portfolio
12 Annual Report 2019 One Health for a better future - Emergency Centre for Transboundary Animal Disease Indonesia 2.7 Strengthening education through field epidemiology training program for veterinarians The MoA has established Indonesia’s first Field Epidemiology Training Programme for Veterinarians course and an associated Master’s program in Field Epidemiology Field epidemiology is an important skill to upgrade the government’s capacity to prevent, detect, and control disease in animal populations. The Field Epidemiology © FAO Training Program for Veterinarians (FETPV) in Indonesia, locally known as Program Epidemiologi Lapangan Veteriner Indonesia - PELVI, was Director of Animal Health of DGLAHS MoA hand over certificates to goverment veterinarians at a established with two different graduation of FETPV students in Yogyakarta. training levels: a 1-year short course (intermediate level) and a 2-year Regional Symposium on Research Master’s degree program (advanced into Smallholder Pig Production, level). Health and Pork Safety in Vietnam on The first cohort of the intermediate 27-29 March 2019.” (insert photo Dr. level training consisted of 19 Ardiana) government veterinarians from Before starting the Intermediate central and provincial governments, Level FETPV second cohort in Disease Investigation Centers (DIC), February 2020, several workshops the national laboratory for animal were completed to improve the product quality and certification training modules based on results of (BPMSPH), and the Cinagara animal the first cohort evaluation. health training center graduated in June 2019. In parallel, the first cohort of advanced level Master’s Degree Fourteen of 19 intermediate level program is being conducted at the graduates conducted 16 in-house Veterinary Faculty of Gadjah Mada © FAO/Sadewa trainings using FETPV modules for University (FKH UGM), consisting their colleagues and other animal of five selected veterinarians from health officers in their work areas. central government and DICs. Dr. Ardiana, an FETPV intermediate The curriculum was specifically level graduate from Denpasar adjusted to contain more content DIC successfully delivered an oral on field epidemiology. The students Dr. Ardiana, an FETPV intermediate level are expected to graduate in July graduate from Denpasar DIC receive a token presentation on the current situation of appreciation from FAO Representative of Classical Swine Fever in East Nusa 2020 as the first Masters in Field during Appreciation of EPT2 Partnership Tenggara Province, Indonesia at the Epidemiology in Indonesia. Event in Jakarta.
13 Story from the Field Chapter 2 Early detect and response to prevent “By using SIZE 2.0, the animal health officers have rapid rabies in Minahasa District collaboration in responding to rabies accurately, effectively and in short time (less than in two days). The animal health officers through One Health Addressing zoonoses and EID at the animal-human-wildlife interface Rabies has become an endemic surveillance/information systems of observed a specific animal (dog) zoonosis in Minahasa District with human health, animal health, and who bites human within 14 days an average of 85 people being wildlife sectors, thus enabling early and human health officers took bitten by dogs every month. In disease detection and response. care of human who got bite. They July – August 2019, DGLAHS- knew the update of cases through Herman Rundengan who works FAO ECTAD conducted SIZE 2.0 SIZE 2.0.” he said. as an animal health officer at training to the local animal and West Lawongan Sub-district of The situation was very different human health officers in the area. Minahasa joined the training before SIZE 2.0 transferred to field SIZE 2.0 is a data sharing and and implemented SIZE 2.0 up to officers in Minahasa. The response communication platform amongst present. to rabies is very slow (more than two weeks) and each sector worked separately. The animal health officers did not intensively observe the animal (dog) who bites the human and the human health officer just gave VAR to patients without knowing it was positive or negative of rabies. The human health officer also did not know how to treat the patient in the first step of rabies. The use of SIZE 2.0 has improved referral system on rabies at Community Health Center in West Lawongan Sub-district of Minahasa. During July-December 2019, they have responded 52 cases of dog bites. Out of 52 cases, 2 cases were positive, 44 cases were negative of rabies, and © MoA 6 cases were unknown (lost dog). SIZE 2.0 continued to be used by the Community Health Center in Animal Health Officer of West Lawongan Sub-district of Minahasa, Herman Rundengan Minahasa District. reporting GHPR case into SIZE 2.0
© FAO/Sadewa A farmer herds his ducks to the fields. Purbalingga, Central Java. T he risk of pathogen amplification, including avian Asia is one of the epicentres of global antimicrobial influenza viruses, and spill-over to humans can be resistance (AMR). Extensive antimicrobial use (AMU) in reduced by improving effective biosecurity and good livestock production is one of the main factors fuelling poultry farm management practices. These include flock AMR in Asia. The Global Health Security Agenda strongly vaccination, especially on sector-3 commercial poultry encourages countries to combat AMR by controlling farms and biosecurity interventions along the poultry antimicrobial use in livestock, especially in poultry. market chain. To support the Indonesian Government in tracking AMR Interventions should be applied at every stage from the trends and AMU in livestock, AMR surveillance and AMU production farms to the collector yards, to live bird markets surveys were initiated in Indonesia along with an AMR and slaughtering sites, some of the places with the highest awareness campaign #BeAntibioticSmart for poultry risks of pathogen spill-over. farmers, local community, students vet faculty, and private animal health services. Evidence-based studies are needed to convince poultry farmers, other poultry industry stakeholders, and policy makers to reform their poultry production and marketing practices along the poultry value chain.
3 Efforts to control avian influenza along poultry market chains and fighting antimicrobial resistance (AMR) 3.1 Good farming practices poultry farmers to improve their farm (GFP) on their farms. The GFP tool for healthy poultry profitability. focuses on improved disease control, reducing the use of antibiotics and production and reduced In the past four years, following disinfectants, and most importantly antimicrobial use (AMU) a series of training seminars and producing safe animal-origin products workshops for 1 375 commercial Not only assisting poultry farmers to for human consumption. poultry farmers, 62 poultry farms implement Good Farming Practices in 16 HPAI high risk districts have Through close collaboration between in their areas, VSOs are now able to improved their farm management local government, the private poultry conduct AMR/AMU monitoring and by practicing 3-zone biosecurity, sector and universities, fourteen surveillance. appropriate flock vaccination, and layer farms in Lampung who had Since the avian influenza outbreak better hygiene and sanitation. implemented 3-zone biosecurity were back in 2006, FAO has always awarded Government food hygiene A key province for FAO-DGLAHS supported the government to and sanitary certificates (NKV – intervention was Lampung, where increase the capacity of VSOs in high- Veterinary Control Number). the Lampung branch of the national risk areas to assist poultry farmers association of layer famers (Pinsar – as they play an important role to Improving poultry Peternak Nasional - PPN) committed farming practices and implement good farming practices to implement Good Farming Practices through our guidelines. following FAO-DGLAHS guidelines will leverage In 2019, besides training on good existing farm product farming practices, FAO-DGLAHS certification schemes encouraged VSOs to conduct a pilot which provide an project on AMR and AMU surveillance FAO NKV Government, opportunity 70 for poultry to measure the on-farm use of and University MoA farmers to sell their 60 antibiotics and capture the patterns Support and Dinas products 50 14 farms to higher (supported value by FAO) of antimicrobial resistance in layer Food retail outlets, such as 40 farms. Two districts (Kendal and Safety supermarkets, which 30 Blitar) participated in the pilot project provides s faan additional Technical GFP 20 rm which included trainings and sample Assistance 45 economic 10 incentive. collection. 0 05 18 019 20 20 3.2 Poultry farmers more Private Sector, 2 Poultry farmers aware to implement and Entrepreneurs The NKV is a government certificate best practices on farm of compliance with sanitation and hygiene requirements as a guarantee Implementing good farming practices The role of experts, government, and business of food safety for foods of animal and providing opportunities for actors in realizing food safety. origin. Along with this certification,
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