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NEW FRONTIERS IN CANCER RESEARCH 2018 - #VCCCpostdoc18 - VCCC Postdoctoral Symposium - Victorian Comprehensive ...
NEW FRONTIERS IN
CANCER RESEARCH
            2018
      VCCC Postdoctoral Symposium

             #VCCCpostdoc18
NEW FRONTIERS IN CANCER RESEARCH 2018 - #VCCCpostdoc18 - VCCC Postdoctoral Symposium - Victorian Comprehensive ...
2018 ORGANISING
                                                                           WELCOME                                    COMMITTEE
                                             Welcome to New Frontiers in Cancer Research –
                                                 the second VCCC Postdoctoral Symposium.

                                                         This conference aims to highlight the exciting research      Liz Christie (Co-convener, Peter Mac)
                                                         of early- and mid- career scientists from across Victoria,
                                                                                                                      Lorey Smith (Co-convener, Peter Mac)
                                                         and to work together to find innovative ways to progress
                                                         our understanding and treatment of cancer.                   Richard Birkinshaw (Walter and Eliza Hall Institute)

                                                         A very warm welcome to our three plenary speakers,           Rita Busuttil (Peter Mac)
                                                         who are leaders from three cutting edge fields of            Bianca Capaldo (Walter and Eliza Hall Institute)
                                                         cancer research: cancer etiology and prevention, novel
                                                         therapeutic strategies, and immunology.                      Jessica Duarte (Olivia Newton-John Cancer Research Institute)

                                                         Our thanks to the VCCC, all of the sponsors, consumer        Laura Forrest (Peter Mac)
                                                         advocates, presenters and delegates for their tremendous     Dale Garsed (Peter Mac)
                                                         response to this meeting. Without their support and
                                                                                                                      Simon Keam (Peter Mac)
                                                         enthusiasm, this event would not be possible.
                                                                                                                      Adam Parslow (Olivia Newton-John Cancer Research Institute)
                                                         We wish you all a stimulating and rewarding meeting.
                                                                                                                      Emma Petrie (Walter and Eliza Hall Institute)

                                                         Regards
                                                         The 2018 Organising Committee

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NEW FRONTIERS IN CANCER RESEARCH 2018 - #VCCCpostdoc18 - VCCC Postdoctoral Symposium - Victorian Comprehensive ...
ACKNOWLEDGEMENTS                                                                    PROGRAM                                                              VCCC Level 7 – Lecture Theatre B
                                                                                                                  Time        Event             Topic                                                            Speakers
                                                                                                                  8.30am      REGISTRATION – Level 7 Foyer
                                                                                                                  8.45am      Welcome           Organising Committee

                                                         The Organising Committee would like to acknowledge       SESSION 1   Sponsored by PerkinElmer
                                                         the generous support of the Victorian Comprehensive      8.50am      Keynote 1         Translating colorectal cancer risk models for tailored           Professor Jon Emery
                                                         Cancer Centre (VCCC), the Peter MacCallum Cancer                                       prevention
                                                         Centre, and all of our sponsors.
                                                                                                                  9.20am      Oral 1            Skeletal muscle loss in non-small cell lung cancer patients      Dr Nicole Kiss
                                                         We would like to thank everyone who provided                                           receiving chemo-radiation and relationship to survival
                                                         assistance along the way, including Michelle Barrett,
                                                                                                                  9.35am      Oral 2            Limitrin: a therapeutic target and biomarker of breast           Dr Delphine Denoyer
                                                         Erin Turner and the VCCC Communications team, the
                                                                                                                                                cancer brain metastasis
                                                         Peter Mac Postdoc Society (PMPS), Caroline Owen, the
                                                         volunteer judges, and the consumer advocates.            9.50am      Oral 3            IL 33 in gastro intestinal cancers: oncogene or tumour           Dr Moritz Eissmann
                                                                                                                                                suppressor
                                                         Finally, thank you to the keynote speakers, presenters
                                                         and all the delegates who have contributed to this       10.05am     Flash Talk 1      HCK activity within the myeloid tumour stroma                    Dr Robert O’Donoghue
                                                         meeting.                                                                               promotes lung cancer progression
                                                                                                                  10.10am     Flash Talk 2      Novel KMT2A Fusion in paediatric leukaemia                       Dr Hansen Kosasih
                                                                                                                  10.15am     Flash Talk 3      Investigating cooperative interactions between PIK3CA            Dr Camilla Mitchell
                                                                                                                                                mutations and APC inactivation in intestinal organoid
                                                                                                                                                models
                                                                                                                  10.20am     Flash Talk 4      The EHF and CDX1 transcription factors co-ordinately             Dr Ian Luk
                                                                                                                                                regulate the differentiation status of colorectal cancer cells
                                                                                                                  10.25am     MORNING TEA – Level 7 Foyer
                                                                                                                  SESSION 2   Sponsored by BD
                                                                                                                  10.55am     Oral 4            Combined CDK4/6 and PI3Kα inhibition is effective and            Dr Joyce Teo
                                                                                                                                                generates anti-tumour immunity in triple-negative
                                                                                                                                                breast cancer
                                                                                                                  11.10am     Oral 5            Rural urban variation in time to diagnosis and treatment         Dr Rebecca Bergin
                                                                                                                                                of colorectal or breast cancer in Victoria
                                                                                                                  11.25am     Oral 6            RIPping leukaemias apart: Exploring necroptosis cell             Dr Gabriella Brumatti
                                                                                                                                                death in Acute Myeloid Leukaemia
                                                                                                                  11.40am     Flash Talk 5      A high throughput approach to identifying                        Dr Kirsty Carey
                                                                                                                                                pharmacological modifiers of mRNA processing and export
                                                                                                                  11.45am     Flash Talk 6      RNAi & CRISPR Screens Identify Hbo1 as critical to               Dr Laura MacPherson
                                                                                                                                                leukaemic stem cell survival
                                                                                                                  11.50am     Flash Talk 7      IL-11 as a therapeutic target to treat cancer                    Dr Jennifer Huynh
                                                                                                                  11.55am     Flash Talk 8      Modelling chronic STAT3 pro-inflammatory signalling in           Dr Fiona Tan
                                                                                                                                                the initiation of head and neck cancer
                                                                                                                  12.00pm     Keynote 2         Approaches to target and treat local lymphatic                   Dr Lisa Kaminskas
                                                                                                                                                metastases

4 | New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018                                                                                  New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018 | 5
NEW FRONTIERS IN CANCER RESEARCH 2018 - #VCCCpostdoc18 - VCCC Postdoctoral Symposium - Victorian Comprehensive ...
KEYNOTE
                                                                              PROGRAM                              SPEAKERS
 Time         Event             Topic                                                       Speakers               Professor Jon Emery
 12.30pm      LUNCH – Level 7 Foyer
                                                                                                                   Herman Professor of Primary Care Cancer Research
              Poster presentations sponsored by Australian Biosearch
                                                                                                                   University of Melbourne
 SESSION 3    Sponsored by GeneSearch                                                                              Professor Emery’s keynote address will focus on
 2.15pm       Oral 7            Establishment of an organoid biobank to personalise the     Dr Dannel Yeo          Translating colorectal cancer risk models for tailored
                                treatment of pancreatic cancer                                                     prevention. Professor Emery is an NHMRC Practitioner
                                                                                                                   Fellow, Director of the Cancer Australia Primary Care
 2.30pm       Oral 8            Low-cost sequence-based gene panel screening: a large       Dr Khalid Mahmood
                                                                                                                   Collaborative Cancer Clinical Trials Group (PC4), and a
                                scale study of colorectal cancer
                                                                                                                   Visiting Research Fellow at the University of Cambridge.
 2.45pm       Oral 9            Neo adjuvant treatment resistance in aggressive             Dr Marek Cmero         He studied medicine at Cambridge and Oxford and
                                prostate cancer is driven by non genomic mechanisms                                obtained his DPhil at Oxford on computer decision
 3.00pm       Flash Talk 9      Charting the epigenetic landscape of the tumour             Dr Mitchell Lawrence   support to assess cancer risk in general practice. His
                                microenvironment                                                                   research interests are in the role of primary care in
                                                                                                                   cancer prevention, diagnosis and follow-up, and primary
 3.05pm       Flash Talk 10     Structured interview and user manual for the selection      Dr Amanda Pomery
                                                                                                                   care trials of complex interventions.
                                and development of cancer support group leaders
 3.10pm       Flash Talk 11     The smac-mimetic birinapant as a targeted therapy for       Dr Najoua Laloui
                                triple-negative breast cancers
 3.15pm       Flash Talk 12     Combinatorial targeting by microRNAs coordinates post       Dr Joseph Cursons
                                transcriptional control of breast cancer EMT
 3.20pm       AFTERNOON TEA – Level 7 foyer
 SESSION 4    Sponsored by Promega
 3.50pm       Oral 10           A pilot randomised controlled trial of an online            Dr Lahiru Russell
                                mindfulness based program for people diagnosed
                                with melanoma
 4.05pm       Oral 11           Pro Survival protein MCL 1 is a promising therapeutic       Dr Michael Dengler
                                target in mantle cell lymphoma
 4.20pm       Oral 12           Mechanistic investigations into acquired resistance to      Dr Rachel Thijssen
                                BH3 mimetics in primary CLL
 4.35pm       Keynote 3         Transcriptional regulation of IL-17 producing T cells and   Dr Lisa Mielke
                                their role in gastrointestinal cancers
 5.05pm                         Awards, Conclusion of speaker program                       Organising Committee
 5.15pm       NETWORKING EVENT – Drinks and nibbles – The Loft, Level 7
 7.00pm       Close

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NEW FRONTIERS IN CANCER RESEARCH 2018 - #VCCCpostdoc18 - VCCC Postdoctoral Symposium - Victorian Comprehensive ...
Dr Lisa Kaminskas, NHMRC research                         Dr Lisa Mielke, Head of the Mucosal
                                                         fellow and senior lecturer University                     Immunity and Cancer Laboratory Olivia
                                                         of Queensland                                             Newton-John Cancer Research Institute

                                                         Dr Kaminskas will present Approaches to target            Dr Mielke will speak on Transcriptional regulation of
                                                         and treat lymphatic metastases. Lisa’s research           IL-17 producing T cells and their role in gastrointestinal
                                                         program is primarily dedicated to using nano and          cancers. In 2018 Dr Mielke was appointed Head of the
                                                         polymer-technology to optimise the delivery of            Mucosal Immunity and Cancer Laboratory at the Olivia
                                                         chemotherapeutic drugs towards sites of tumour            Newton-John Cancer Research Institute. Her current
                                                         growth and metastasis. In particular her focus is on      work is funded by Cure Cancer Australia and focuses on
                                                         eliminating cancers that have spread to regional          the role of innate lymphoid cells and T cells in regulating
                                                         (sentinel) lymph nodes and the lungs with the view        intestinal inflammation and cancer progression.
                                                         to maximise the successful treatment of metastatic
                                                         cancers and improve survival rates for cancer patients.

8 | New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018                                                                                        New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018 | 9
NEW FRONTIERS IN CANCER RESEARCH 2018 - #VCCCpostdoc18 - VCCC Postdoctoral Symposium - Victorian Comprehensive ...
SUPPORTED BY:

Corporate sponsors:

                                                                           ORAL PRESENTATIONS

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NEW FRONTIERS IN CANCER RESEARCH 2018 - #VCCCpostdoc18 - VCCC Postdoctoral Symposium - Victorian Comprehensive ...
ORAL 1:                                                                                       SESSION 1                     ORAL 2:                                                                                      SESSION 1
Skeletal muscle loss in non-small cell lung cancer patients receiving                                                       Limitrin: a therapeutic target and biomarker of breast cancer brain metastasis
chemo-radiation and relationship to survival
Nicole Kiss                                                 Results: Muscle area and muscle density decreased               Delphine Denoyer                                             Our data indicate that high limitrin expression is
Peter MacCallum Cancer Centre                               significantly by week four of CRT (-6.6 cm2, 95%                Olivia Newton-John Cancer Research Institute                 associated with poor prognosis in HER2 and Triple
                                                            CI -9.7 - -3.1, p
ORAL 3:                                                                                      SESSION 1                    FLASH TALK 1:                                                                              SESSION 1
IL-33 in gastro-intestinal cancers: oncogene or tumour suppressor?                                                        HCK activity within the myeloid tumour stroma promotes lung cancer progression

Moritz Eissmann                                              In the colon cancer setting, ST2-deficiency lead to          Robert O’Donoghue                                           findings in CRC patients. Next we used adenoviral
Olivia Newton-John Cancer Research Institute                 increased tumour burden in a mouse model of sporadic         Austin Health, Olivia Newton-John Cancer                    or tamoxifen-induced Cre expression in the lung to
                                                             colorectal cancer. Reciprocal bone marrow chimera            Research Institute                                          activate oncogenic KrasG12D expression and found that
Christine Dijkstra, Frederik Masson and Matthias Ernst       indicated that the radio-resistant non-hematopoietic                                                                     HckCA promoted tumour progression in both models.
IL-33 is an IL-1 family cytokine, which regulates            compartment contributes to the increased tumour              Megan O’Brien, Rowena Lewis, Andrew Carey, Daniel Batey,    To eliminate an possible contribution of Hck activity in
inflammatory responses during infections. In cancer,         growth. Indeed, we found St2 expression in the               Maree Faux, Gary Andreson, Tom John, Matthias Ernst.        tumour cells we grafted (sc) the lewis lung carcinoma
IL-33 can act pro or anti-tumoral depending on the           mesenchymal cells, in which IL-33 stimulation induced        The myeloid-specific Src family kinase, HCK, promotes       (LLC) cells, which are derived from a spontaneous
tumour type and stage of disease. Here we study the          NF-kB pathway activation. Loss of IL-33 signalling in        the proliferation and survival of myeloid leukaemia         NSCLC in a C57BL/6 mouse and do not express Hck, into
role of IL-33 signalling in mouse models of gastric          the non-haematopoietic radio-resistant compartment           cells and the alternative activation of macrophages         wildtype (Wt)or HckKO mice. We observed that all Wt
cancer and colorectal cancer.                                coincided with an increase in Treg infiltration and with a   (AAMs) during benign inflammation. We have                  host mice had reached ethical endpoints for tumour
                                                             strong reduction of an IFNy gene expression signature.       previously shown in that HCK activity in the tumour         size or well-being within 5 weeks of engraftment, while
For gastric cancer, Kaplan-Meyer-survival analysis
                                                             Furthermore, IL-33 administration reduced colon cancer       stroma predicts poor patient outcomes in colorectal         only 1/3 of HckKO mice reached these endpoints in the
showed that high expression of the IL-33 receptor, ST2
                                                             allograft growth associated with tumour-infiltrating         cancer (CRC) and mice with a constitutive active Hck        same period of time. Next we assessed if inhibition of
in stomach cancer patients predicts poor prognosis. In
                                                             IFNy-positive T cells.                                       (HckCA) developed more and larger tumours following         Hck with the small molecule RK20449 in combination
accordance, IL-33 and St2 were highly elevated in gastric
                                                                                                                          AOM-induced CRC [Cancer Cell, 2017, 31(4):563-575].         with chemotherapy could reduce the progression
tumours in two independent mouse models. Genetic             We conclude, that tumour-derived IL-33 promotes
                                                                                                                          To-date, polymorphisms and mutations in HCK have            of human A549 NSCLC cells in vivo. We found the
deficiency of IL-33 signalling (ST2-/-) diminished gastric   gastric cancer growth through tumour-associated mast
                                                                                                                          been observed in patients with lung cancer and chronic      combination of cisplatin and RK20449 was more
tumour growth, and was associated with a decrease in         cells and TAM-dependent mechanisms, while IL-33
                                                                                                                          inflammatory lung disease so we investigated the role       effective in reducing tumour growth than cisplatin
mast cells, tumour-associated macrophages (TAM) and          signalling within mesenchymal cells acts as a colon
                                                                                                                          of HCK in the development and progression of lung           alone, while RK20449 had no impact on A549 tumour
angiogenesis. Genetic depletion or pharmacological           tumour suppressor pathway.
                                                                                                                          cancer. We first examined tumour sections from lung         progression as a single agent. We have found that HCK
inhibition of mast cells and TAM reduced tumour
                                                                                                                          cancer patients by IHC to detect phosphorylated HCK         is active within the tumour stroma of human NSCLC
burden, again associated with decreased angiogenesis.
                                                                                                                          (pHCK) as a surrogate marker for HCK activation and         and that this protein functionally promotes NSCLC
Mechanistically, we show that tumour-produced                                                                             found abundant pHCK in the tumour stroma of non-            growth in preclinical mouse and xenograft models,
IL-33 can activate mast cells, which in turn recruit                                                                      small cell lung cancer (NSCLC) patients – consistent        therefore targeting of HCK is a promising combination
pro-tumoral and pro-angiogenic macrophages to the                                                                         with HCK expression in myeloid cells, the tumour            therapy for the treatment of NSCLC.
tumour through release of chemokine’s.                                                                                    promoting properties of these cells and our previous

14 | New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018                                                                                           New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018 | 15
FLASH TALK 2:                                                                            SESSION 1                   FLASH TALK 3:                                                                             SESSION 1
Novel KMT2A Fusion in Paediatric Leukaemia                                                                           Investigating cooperative interactions between PIK3CA mutations and
                                                                                                                     APC inactivation in intestinal organoid models
Hansen Kosasih                                            Results: We identified a novel MLL-r: MLL-TFE3– t(11;X).   Camilla Mitchell                                           In order to understand this process in intestinal
Murdoch Children’s Research Institute                     This fusion causes leukaemia in syngeneic transplant       Peter MacCallum Cancer Centre                              epithelial cells, we have successfully generated 3D
                                                          model, having a latency similar to MLL-AF9. MLL-TFE3                                                                  intestinal organoids, from our novel conditional PIK3CA
Gabriella Brumatti, Jarrod Sandow, Stefan Bjelosevic,     expressing leukaemic cells have a similar drug-response    Wayne Phillips                                             mutant mouse model, where PIK3CAH1047R mutation
Ray Bartolo, Ricky Johnstone, Paul G Ekert                profile to MLL-AF9 leukaemic cells. TFE3 fusions           PI3K pathway activation is involved in many cancer         can be activated in vitro at endogenous levels, within
Mixed Lineage Leukaemia-rearrangement (MLL-r)             with other genes are known drivers of other cancer         hallmarks, including metabolism, migration,                intestinal stem cells (driven by LGR5-Cre). Additionally
leukaemia accounts for the majority of infant and         subtypes, notably renal cell carcinoma and alveolar        proliferation, and cell survival. Somatic mutations in     the APC gene can be truncated and inactivated by the
paediatric acute myeloid leukaemia. It is a marker        soft part sarcoma. Unlike these other fusions, this        the PI3K pathway occur at a high frequency in many         same Cre driver. PIK3CAH1047R mutants maintain
of poor prognosis and higher risk of relapse. MLL-r       MLL fusion retains all the TFE3 functional domains. By     human tumours, including 30% of colorectal cancers         a budding morphology (compared to non-mutants)
juxtapose the KMT2A (Lysine Methyl Transferase 2A)        making carboxy-terminal truncations of this fusion,        (CRC). CRC is the most frequent malignancy of the          but undergo increased proliferation, growing bigger
gene with one of at least 70 other fusion partners,       we demonstrate that TFE3 domains contribute to the         gastrointestinal tract, and the 3rd most common cancer     and faster. APC inactivation (± PIK3CAH1047R)
producing an in-frame chimeric protein. Here,             oncogenicity of this fusion protein.                       worldwide. PIK3CA mutations primarily occur in one of      drastically changes organoid morphology into cyst-like
we describe a novel MLL-r identified in paediatric                                                                   two mutation hotspots of the catalytic subunit of PI3K,    spheres, in addition to increased proliferation. Using
                                                          Conclusion: In this study, we have discovered a novel
leukaemia, in which TFE3 (Transcription Factor Binding                                                               E545K and H1047R. PIK3CA mutations do not initiate         western blotting and immunohistochemistry we have
                                                          and aggressive MLL fusion, MLL-TFE3. Functional
to IGHM Enhancer 3) is fused to KMT2A.                                                                               cancer on their own, requiring the cooperation of other    characterised the intestinal nature of these isogenic
                                                          domains of TFE3 in this fusion are important for full
                                                                                                                     oncogenes. For CRC, mutation of APC leads to benign        organoids using intestinal epithelial cell markers
Methods: We used RNA-Seq to identify novel expressed      leukaemogenic activity, indicating that the fusion
                                                                                                                     adenomatous polyps. Previously, our lab has shown          (lysozyme, Muc2, Chromogranin A). Additionally we
fusions in paediatric leukaemia. These fusions were       partners of KMT2A contribute to the oncogenicity in
                                                                                                                     that PI3K mutations cooperate with APC mutations to        show that PIK3CAH1047R mutants have increases in
cloned into a tetracycline-repressible system, and        MLL rearrangements.
                                                                                                                     progress CRC tumourigenesis.                               downstream PI3K/AKT signalling pathway markers
transduced into E14.5 murine foetal liver cells to
test oncogenicity in a syngeneic transplant model.                                                                                                                              (pAKT, pS6, stathmin, PGSK3B, pPRAS40), and APC
Harvested leukaemic cells were cultured ex vivo to                                                                                                                              inactivated organoids show increased wnt signalling
determine immunophenotype, colony-forming capacity                                                                                                                              (B-catenin). Additionally, PIK3CAH1047R mutants show
and cytokine dependency. We tested the response                                                                                                                                 increased sensitivity to the PI3K inhibitor BYL719, as
of these cells to our previously published novel drug                                                                                                                           well as the establishment of resistant clone outgrowth.
combination, the SMAC-mimetic/caspase inhibitor.

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16 | New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018                                                                                     New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018 | 17
FLASH TALK 4:                                                                                  SESSION 1                    ORAL 4:                                                                                          SESSION 2
The EHF and CDX1 transcription factors co-ordinately regulate the                                                           Combined CDK4/6 and PI3Kα inhibition is effective and generates anti-tumor
differentiation status of colorectal cancer cells                                                                           immunity in triple-negative breast cancer.
Ian Luk                                                         Results: Expression of EHF was significantly                Joyce Teo                                                        Triple-negative breast cancer (TNBC) is an aggressive
Olivia Newton-John Cancer Research Institute                    downregulated in poorly differentiated CRC cell lines       Peter MacCallum Cancer Centre                                    subtype of breast cancer and new treatments are
                                                                compared to moderately differentiated lines. However,                                                                        urgently needed for this disease. As single-agent
Nicholas Clemons, John Mariadason                               knockdown or re-expression of EHF alone failed to           Stephanie Versaci1, Sathana Dushyanthen1,                        therapies, CDK4/6 and PI3Kα inhibitors have shown
Colorectal cancer (CRC) is a leading cause of cancer            alter the differentiation status of CRC cell lines. We      Franco Caramia1, Peter Savas1, Chris P. Mintoff1,                little evidence of clinical activity in TNBC. Interestingly,
related deaths for which there is an urgent need                therefore determined whether EHF cooperates with            Magnus Zethoven1, Balaji Virassamy1, Stephen J. Luen1,           we have shown that dual blockade of CDK4/6 and
to develop novel treatment paradigms. The loss of               other intestinal transcription factors to regulate          Grant A. McArthur1,2, Wayne A. Phillips1,2,4,5,                  PI3Kα is synergistically effective against multiple
differentiation is a key characteristic of colorectal cancer,   differentiation. Systematic knockdown of EHF with           Phillip K. Darcy1,2,3, and Sherene Loi*,1,2                      TNBC models. Combined treatment was shown
and is associated with increased metastatic propensity,         other transcription factors downregulated in poorly         1
                                                                                                                                 Division of Research, Peter MacCallum Cancer Centre,       to significantly improve disease control in human
chemo-resistance and poorer outcome. However,                   differentiated CRC cell lines demonstrated that the              Melbourne, Victoria, Australia                              xenograft models compared with either monotherapy.
the molecular basis for differentiation loss is not well        combinatorial knockdown of EHF and CDX1 significantly                                                                        This combination treatment exerts TNBC disease
                                                                                                                            2
                                                                                                                                Sir Peter MacCallum Department of Oncology,
understood. Ets Homology Factor (EHF) is a member               downregulates the expression of differentiation                                                                              control by significantly increasing apoptosis, cell
                                                                                                                                University of Melbourne, Parkville, Australia
of the E26 transformation specific (ETS) family of              markers and disrupted the glandular structure of                                                                             cycle arrest and tumor immunogenicity as well as
transcription factors, which is highly expressed in normal      moderately differentiated CRC cell lines. Conversely, the
                                                                                                                            3
                                                                                                                                Cancer Immunology Research, Peter MacCallum                  generating immunogenic cell death in human TNBC
colonic epithelial cells. We observed that expression           re-expression of EHF and CDX1 in poorly differentiated          Cancer Centre, Melbourne, Victoria, Australia                cell lines. Combined CDK4/6 and PI3Kα inhibition
of EHF, along with several other transcription factors          CRC cells significantly induced differentiation marker      4
                                                                                                                                Division of Cancer Surgery, Peter MacCallum                  significantly increased tumor-infiltrating T cell
is significantly downregulated in poorly differentiated         expression and induced some features of glandular               Cancer Centre, Melbourne, Victoria, Australia                activation and cytotoxicity and decreased frequency
CRCs. The aim of this study was to determine the                formation. Furthermore, the re-induction of EHF                                                                              of immunosuppressive myeloid-derived suppressor
direct role for EHF, alone and in combination with other
                                                                                                                            5
                                                                                                                                University of Melbourne Department of Surgery,
                                                                and CDX1 significantly reduced migration of CRC                                                                              cells in a syngeneic TNBC mouse model. Notably,
transcription factors, in regulating the differentiation                                                                        St. Vincent’s Hospital, Melbourne, Victoria, Australia
                                                                cell lines and induced sensitivity to commonly used                                                                          combined CDK4/6 and PI3Kα inhibition, along with
status of colorectal cancer cells.                              chemotherapeutic agents.                                                                                                     inhibition of immune checkpoints PD-1 and CTLA-4
Methods: Affymetrix microarrays were used to                                                                                                                                                 induced complete and durable regressions (>1 year) of
                                                                Conclusion: The transcription factors EHF and CDX1 are
identify transcription factors, which are significantly                                                                                                                                      established TNBC tumors in vivo. Overall, our results
                                                                co-ordinately downregulated in poorly differentiated
downregulated in poorly differentiated colorectal cancer                                                                                                                                     illustrate convergent mechanisms of CDK4/6 and
                                                                CRCs, and work in combination to regulate the
cell lines. Differential gene expression was confirmed by                                                                                                                                    PI3Kα blockade on cell cycle progression, DNA damage
                                                                differentiation status of CRCs.
q-RT-PCR and western blot. The moderately differentiated                                                                                                                                     response and immune-modulation and may provide a
colorectal cancer cell line SW948 was transfected with                                                                                                                                       novel therapeutic approach for TNBC.
EHF and/or CDX1 targeting siRNAs using lipofectamine.
The poorly differentiated cell line HCT116 was transfected
with EHF and CDX1 expression vectors and stable cell
lines selected by G418 resistance and GFP expression
respectively. Cell migration was analysed using the
Boyden-Chamber assay and stained for migrated cells.

18 | New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018                                                                                                  New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018 | 19
ORAL 5:                                                                                   SESSION 2                      ORAL 6:                                                                                SESSION 2
Rural-urban variation in time to diagnosis and treatment of colorectal                                                   RIPping leukaemias apart: Exploring necroptosis cell death
or breast cancer in Victoria.                                                                                            in Acute Myeloid Leukaemia
Rebecca Bergin                                             Results: 433 colorectal (48% rural) and 489 breast (42%       Gabriela Brumatti                                         genes such as Ripk1, Ripk3 and Mlkl. Surprisingly,
University of Melbourne, Centre for Cancer,                rural) patients, 621 GPs and 370 specialists completed        Walter and Eliza Hall Institute                           deletion of Ripk1 induced a rapid and more aggressive
Research/Dept of General Practice; Cancer                  surveys. Compared to urban patients, symptomatic                                                                        disease. Intravital imaging revealed increased bone
                                                           colorectal cancer patients from rural areas had               Chunyan Ma, Natasha Silke, Emma Morrish,                  marrow infiltration of Ripk1-/- AMLs as early as 10
Council Victoria
                                                           significantly longer total interval at the median (18 days    Najoua Lalaoui, Edwin Hawkins and John Silke              days after transplant. The early development of these
Jon D Emery, Ruth Bollard, Alina Z Falborg,                longer, 95% Confidence Interval (Cl): 9-27), 751h (53,        Resistance to chemotherapy is a major problem in          AMLs was independent of apoptosis resistance,
Henry Jensen, David Weller, Usha Menon, Peter Vedsted,     95% Cl: 47-59) and 901h percentiles (44, 95% Cl: 40-48).      cancer treatment and is frequently associated with        increased proliferation or changes on cell metabolism,
Robert J Thomas, Kathryn Whitfield, Victoria White         These patients also had longer health system intervals        failure of cancer cells to undergo caspase-dependent      but were dependent on the kinase activity of Ripk1.
In Victoria, survival is poorer for rural compared         (7--85 days longer), largely due to longer diagnostic         apoptosis. Necroptosis is a form of programmed cell       AML generated from a kinase-activity deficient Ripk1
to urban patients with colorectal cancer, but not          intervals (6-54 days longer). In contrast, breast cancer      death that occurs in the absence of caspase activity      (D138N mutant) had a slight delay on the disease onset,
breast cancer. Delayed diagnosis and treatment may         intervals were similar for rural and urban women, except      and thus could be exploited as an anti-cancer therapy     nonetheless remained more aggressive than wild-type
contribute to disparities, but research into rural-urban   the patient interval, which was shorter for rural patients.   to overcome apoptosis resistance. We explored the         leukaemias. Our results suggest that Ripk1-mediated-
cancer pathways is lacking. We investigated time to                                                                      relevance of necroptosis in the development and           necroptosis may play a tumour suppression role in the
                                                           Conclusions: Consistent with variation in survival, we
diagnosis and treatment for rural and urban Victorians                                                                   treatment of Acute Myeloid Leukaemias (AML). Using        progression of MLL-AMLs, providing novel therapeutic
                                                           found a longer total interval for rural patients with
with colorectal or breast cancer.                                                                                        genetic knockout murine models of AML, we generated       opportunities for the treatment of these leukaemias.
                                                           colorectal cancer, but not breast cancer. These results
                                                                                                                         primary leukaemias deficient in necroptosis-related
Methods: Population-based surveys (2013-14) were           suggest that inequities can be ameliorated and may
completed by patients (aged >40, approached
FLASH TALK 5:                                                                           SESSION 2                     FLASH TALK 6:                                                                             SESSION 2
A high throughput approach to identifying pharmacological modifiers                                                   RNAi & CRISPR Screens Identify Hbo1 as critical to leukaemic stem cell survival
of mRNA processing and export
Kirsty Carey                                               examining their effects on cell death and RNA              Laura MacPherson                                             RNAi studies and identify the precise functional
Peter MacCallum Cancer Centre                              localisation within breast cancer cells. Coupled with      Peter MacCallum Cancer Centre                                domain required to maintain LSC, we performed a
                                                           advanced image analysis, it is possible to reproducibly                                                                 domain-focused CRISPR-Cas9 screen containing ~1000
Vihandha Wickramasinghe, Toby Williams                     detect and quantify phenotypes relating to mRNA            Enid Lam, Juliana Anokye, Joy Liu, Chen-Feng Wang,           sgRNAs targeting ~200 functional domains involved
Cancers with altered RNA processing are heavily reliant    processing and export including nuclear retention and      Christopher Vakoc, Marnie Blewitt, & Mark Dawson             epigenetic regulation. All sgRNAs targeting the MYST
on gene expression to ensure production of oncogenic       sub-cellular compartmentalisation of mRNA induced by       Acute myeloid leukaemia (AML) is an aggressive blood         acetyltransferase domain of HBO1 were significantly
protein isoforms. This creates novel vulnerabilities in    compounds, and as such we have demonstrated the first      cancer that remains an unmet clinical need, with over        depleted in LSC and bulk leukaemic cells. Following
cancer cells that can be therapeutically exploited using   ever compounds inhibiting mRNA export. This assay          70% of patients still succumbing to the disease. AML is      genetic knockout of HBO1, we observed increased
compounds that affect the gene expression pathway,         can also be used to monitor RNA distribution in cancer     sustained by a small population of leukaemic stem cells      apoptosis, cell cycle arrest and differentiation of LSC.
such as nuclear export of mRNA. Compounds inhibiting       cells lines and cellular models of genetic modification.   (LSC) that possess the ability to self renew indefinitely    Rescue experiments demonstrated overexpressed
all other steps of the gene expression pathway are         Future characterisation of compounds identified in         and regenerate the cancer after therapy. Our group has       wildtype but not catalytic mutant HBO1 rescued cell
promising therapeutic candidates, and many have            our screen and their mode of action will facilitate our    developed a novel methodology to culture an enriched         growth following HBO1 knockout, indicating catalytic
reached clinical trials. Thus, development of RNA export   understanding of mRNA processing and export and will       population of murine LSC, allowing us for the first time     activity of HBO1 to be important LSC survival and as
inhibitors offers a unique opportunity to develop          hopefully lead to development of pharmacologically         to study LSC biology in depth. We performed a high           such small molecule inhibitors for the MYST catalytic
innovative, targeted cancer therapeutics. We have          relevant compounds which can eventually advance to         content shRNA screen in our LSC enriched population          domain are currently being developed. Collectively,
developed and optimised a sensitive, high-throughput       clinical trials as cancer therapeutics.                    to identify epigenetic enzymes critical to LSC. This         our results support a role for HBO1 in LSC survival.
assay to screen 25,000 natural, “drug-like” compounds                                                                 negative screen contained ~2000 hairpins targeting           Ongoing studies include: RNA-sequencing, chromatin
                                                                                                                      ~300 epigenetic regulators. Our analyses showed MYST         immunoprecipitation sequencing, assay for transposase
                                                                                                                      acetyltransferase HBO1 (MYST2, KAT7) was critical to         accessible chromatin sequencing, proteomics and
                                                                                                                      both our LSC and leukaemic blast populations. Hairpins       acetylomics to understand the mechanistic events at
                                                                                                                      used in RNAi screen were validated by gene expression,       chromatin following HBO1 depletion and inhibition.
                                                                                                                      protein and competition asssays. To complement our

22 | New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018                                                                                        New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018 | 23
FLASH TALK 7:                                                                               SESSION 2                    FLASH TALK 8:                                                                                SESSION 2
IL-11 as a therapeutic target to treat cancer                                                                            Modelling chronic STAT3 pro-inflammatory signalling
                                                                                                                         in the initiation of head and neck cancer
Jennifer Huynh                                               Results: MC38 growth was attenuated in il11r-/- mice        Fiona Tan                                                     pro-inflammatory signalling. This pro-inflammatory
Olivia Newton-John Cancer Research Institute                 compared to wild type hosts. Lower tumour burden            Peter MacCallum Cancer Centre                                 signalling precedes spontaneous HNSCC development
                                                             corresponded with a modest increase in tumour-                                                                            that is accelerated in the presence of chemical
Dr. Ashwini Chand, Prof. Matthias Ernst                      infiltrating CD8+ T cells. In addition, T cells harvested   Suraya Roslan, Gabriella Farrugia, Yuchen Bai,                carcinogens in mice. Loss of Grhl3 is also evident in a
Colorectal cancer is a pressing health concern and there     from il11r-/- hosts expressed lower levels of GZMB,         Zixuan Zhao, Charbel Darido                                   subset of primary human HNSCC and HNSCC cell lines
is a demand to develop novel therapeutics and improve        perforin and IFNγ under both basal conditions and           Head and Neck Squamous Cell Carcinoma (HNSCC)                 in which the oncogenic miR-21 downregulates Grhl3,
current therapies to treat this disease. Immunotherapy       following PMA/ionomycin stimulation.                        is the sixth most prevalent cancer worldwide.                 inducing c-MYC and promoting HNSCC growth in a
has been highly successful for the treatment of solid                                                                    Tobacco smoking and frequent alcohol consumption,             similar fashion to our mouse model. STAT3 was also
                                                             Conclusion: Here we report that IL-11 signalling
malignancies however the majority of colorectal                                                                          betel nut chewing, genetic predisposition and                 shown to induce miR-21 in human HNSCC providing a
                                                             supports tumourigenesis using the MC38 colon cancer
cancers do not typically respond to immunotherapy.                                                                       human papillomavirus (HPV) infection are the most             link between this inflammatory node and the loss of
                                                             mouse model. For the first time, we have characterised
Accumulating evidence alludes to a role for IL-11                                                                        commonly cited risk factors for the development of            Grhl3. In this project, we will evaluate the role of Stat3
                                                             a functional role for IL-11 in modulating anti-tumour
signalling in tumour development although the                                                                            HNSCC. The treatment modality for HNSCC involves              pro-inflammatory signalling in driving HNSCC in the
                                                             T cell function. Overall, the findings from this study
mechanisms underlying IL-11 biology in colorectal                                                                        surgery, radiotherapy and/or chemotherapy that are            absence of Grhl3. We will assess the interplay between
                                                             indicate IL-11 as a potential therapeutic target for the
cancer remain largely unknown. Here, we postulate                                                                        administered regardless of the aetiology or molecular         pro-inflammatory STAT3 and pro-oncogenic miR-21/
                                                             treatment of colorectal cancer.
that IL-11 could be a mode of immunosuppression                                                                          drivers. Our laboratory has recently achieved a pivotal       Grhl3/c-MYC pathways in vivo that could be targeted in
which can be targeted as a therapeutic strategy to                                                                       finding in HNSCC by identifying the Grainyhead-like           subsets of HNSCC. Outcomes will delineate the origin
overcome the poor responses of colorectal cancer to                                                                      3 (Grhl3) transcription factor as a critical tumour           of head and neck cancer, pioneer novel therapeutic
immunotherapy.                                                                                                           suppressor in HNSCC. Restricting deletion of Grhl3 to         interventions against cancer-promoting factors, and
                                                                                                                         the oral epithelium in mice results in epithelial barrier     test targeted therapies in subsets of HNSCC.
Method: To assess the utility of targeting IL-11
                                                                                                                         impairment, stimulating a chronic epithelial Stat3
signalling in colon cancer in vivo, wild type and Il11r-/-
C57BL/6 mice were injected subcutaneously in the flank
on Day 0 with 1 x 106 MC38 colon cancer cells. The mice
were then treated with an anti-PD-1 antibody i.p. dose
once every 3 days. Tumours were harvested from mice
at day 18 and were analysed by FACs. To ascertain a role
for IL-11 signalling in T cell activity, CD8+ and CD4+ T
cells were FACs-sorted from wild type and il11r-/- mice,
and activated with PMA/ionomycin for 24h. The level of
cytolytic activity was assessed by qPCR and ELISA.

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24 | New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018                                                                                            New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018 | 25
ORAL 7:                                                                                         SESSION 3                     ORAL 8:                                                                                    SESSION 3
Establishment of an oganoid biobank to personalise the treatment                                                              Low-cost sequence-based gene panel screening:
of pancreatic cancer                                                                                                          a large-scale study of colorectal cancer
Dannel Yeo                                                      system to test the individual patient tumour’s response       Khalid Mahmood                                              We employed the Hi-Plex multiplex PCR-based
University of Melbourne                                         to therapeutics in vitro. Our aim was to establish an         University of Melbourne                                     sequence-screening system due to its simplicity,
                                                                organoid culturing system for pancreatic tumours and                                                                      throughput and low cost. We have developed software
Dannel Yeo 1,2, Ronnie Ren Jie Low 1,2,3, Belinda Lee 3,5 ,6,   to test the validity of utilising organoids to predict        Mark Clendenning, Marie Lorans, Harindra Jayasekara,        tools for quality assessment, variant calling and
Laura M. Beyit 1,2, Leakhena Leas 2, Karey Cheong 2,            therapeutic response.                                         Thomas Green, Peter Georgeson, Neil O’Callaghan,            annotation for Hi-Plex sequencing data (https://github.
Voula Dimitriadis 2, Helen Brasier 3,5, Michael Christie 5,                                                                   Susan Preston, Christophe Rosty, Daniel J. Park,            com/khalidm/hiplexpipe). Our tools complement and
Michelle Palmieri 3,4, Chin Wee Tan 3,4, Yumiko Hirokawa 3,4,   Method: Organoid cultures were established from               Polly Newcomb, Loic Le Marchand, Stephen N. Thibodeau,      take advantage of the underlying Hi-Plex chemistry,
Anthony Burgess 3,4, Frederic Hollande 1, Peter Gibbs 3,5,6,    patients undergoing an EUS-guided fine needle biopsy          Noralane Lindor, Steven Gallinger, David Duggan,            creating a streamlined and comprehensive protocol.
Tracy Putoczki 3,4, Sean M.Grimmond 1,2                         or resection surgery (Whipples or pancreatectomy)             Graham Casey, John L. Hopper, Finlay A. Macrae,             We designed a CRC gene panel comprising the coding
                                                                for a pancreatic mass. Ethics was obtained for                Ingrid M. Winship, Mark A. Jenkins, Bernard Pope,
1 Department of Clinical Pathology, University of                                                                                                                                        regions of the most important candidate predisposition
                                                                collection across 8 sites in Victoria. Collected tissue and   Daniel D. Buchanan for the Colon Cancer Family Registry.
  Melbourne, Victoria, Australia                                                                                                                                                          genes from our own research and literature. Variant
                                                                established organoids were genotyped using a panel of
                                                                                                                              Only a small proportion of the heritable risk for           were called using hiplexpipe and filtered on metrics
2 University of Melbourne Centre for Cancer Research,          the most commonly observed PDAC mutations: KRAS,
                                                                                                                              colorectal cancer (CRC) can be attributed to mutations      such as sequencing depth, allele proportions and
  University of Melbourne, Victoria, Australia                  TP53 and Pl 6. Organoids were tested in the presence
                                                                                                                              within known CRC-associated genes, suggesting that          genotype estimates. Individual variants were prioritized
3 The Walter and Eliza Hall Institute of Medical               of chemotherapies using time-lapsed 3 D imaging and
                                                                                                                              additional CRC-predisposition genes are yet to be           based on the criteria: (1) rare variants (ExAC MAF
  Research, Victoria, Australia                                 CellTitre-Glo.
                                                                                                                              discovered. Novel CRC predisposition genes are likely       < 0.05%), (2) protein truncating variants and (3) non-
4 Department of Medical Biology, University                    Results and Conclusions: 57 specimens were collected          to be very rare, therefore new discoveries require          synonymous variants with deleterious functional
  of Melbourne, Victoria, Australia                             fom March 2017 to March 2018 where 26 were                    screening large cohorts, which imposes significant cost     impact based on CADD or REVEL.
                                                                obtained from fine needle biopsy and 31 from surgical         constraints. Addressing this problem, we have applied a
5 The Royal Melbourne Hospital, Melbourne, Australia                                                                                                                                     Analysis of our CRC-Hi-Plex screening data identified
                                                                resection. 41 (72%) were histologically confirmed to be       cost-effective sequencing system to a set of candidate
                                                                                                                                                                                          predicted pathogenic variants in RNF43, NTHL1, POLE
6 Department of Medical Oncology, Western Hospital,            pancreatic cancer. 7 (17%) of these samples collected         genes in a large cohort of CRC cases and controls
                                                                                                                                                                                          and POLD1. We will discuss the characteristics of these
  Melbourne, Australia                                          showed no mutations demonstrating the difficulty in           (~4000) from the Colon Cancer Family Registry. We then
                                                                                                                                                                                          variants and the clinicopathological features of carriers
                                                                sampling viable tumour cells. Of the remaining 34, 20         interrogated the sequencing results to determine the
                                                                                                                                                                                          in our presentation. These data suggest Hi-Plex to be
                                                                (59%) were successfully grown as organoids. Organoid          spectrum of rare variants in the selected genes and the
                                                                                                                                                                                          a valuable tool for studying and diagnosing genetic
Pancreatic cancer remains one of the most lethal of             mutational profile was found to mirror the matching           associations of such variants with disease, including
                                                                                                                                                                                          causes of human diseases in large cohorts.
alI solid tumours and most patients do not respond              tumour sample and ex vivo chemotherapy treatment              clinicopathological features. The outcomes of this work
to therapies. Although there have been scientific               resulted in a dose dependent response similar to              will inform clinical screening practices.
advancements in our understanding of this cancer, this          the drug response of the patient post-surgery. This
has not translated to any substantial improvement in            illustrates the potential tool organoids could have
median survival (-4-6 months). An approach to identify          in assisting and directing pancreatic cancer patient
the most effective therapy for each patient is urgently         management as well as a platform to identify the
needed. Organoids, grown in a 3D environment from               individual’s key targetable cancer drivers and test novel
patient tumour samples, maintain the characteristic of          therapeutic combinations.
the original patient tumour, there bv providing a model

26 | New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018                                                                                               New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018 | 27
ORAL 9:                                                                                      SESSION 3                   FLASH TALK 9:                                                                              SESSION 3
Neo-adjuvant treatment resistance in aggressive prostate cancer                                                          Charting the epigenetic landscape of the tumour microenvironment
is driven by non-genomic mechanisms
Marek Cmero                                                    prior to radical prostatectomy. Biopsies were obtained    Mitchell Lawrence                                             display remarkably distinct and enduring genome-wide
Murdoch Children’s Research Institute,                         from patient tumours prior to the commencement            Peter MacCallum Cancer Centre                                 changes in DNA methylation, significantly at enhancers
University of Melbourne                                        of treatment and post-treatment from the removed          (and Monash University)                                       and promoters, compared to non-malignant prostate
                                                               prostate. We performed whole-genome and                                                                                 fibroblasts (NPFs). Differentially methylated regions
Despite the high incidence of prostate cancer, as many as                                                                Ruth Pidsley, Clare Stirzaker, Renea Taylor, Susan Clark
                                                               transcriptome sequencing on patient tumour samples,                                                                     associated with changes in gene expression have
91% of cases remain localised and clinically indolent. In
                                                               with matched normals for the genomic analysis, and a      The growth and progression of solid tumours involves          cancer-related functions and accurately distinguish
cases of aggressive disease, androgen deprivation therapy
                                                               matched control cohort for the trancriptomic analysis.    dynamic cross-talk between cancer epithelium                  CAFs from NPFs. Remarkably, a subset of changes is
(ADT) lowers the level of these circulating androgens
                                                                                                                         and the surrounding microenvironment. To date,                shared with prostate cancer epithelial cells, revealing
and is currently the most effective first-line therapy. In     Surprisingly, we found no consistent DNA alterations
                                                                                                                         molecular profiling has largely been restricted to the        the new concept of tumour-specific epigenome
almost all patients, the effectiveness of ADT is short-lived   that could explain treatment response to ADT. Low
                                                                                                                         epithelial component of tumours; therefore, features          modifications in the tumour and its microenvironment.
and resistance invariably arises. The mechanisms of ADT        mutation rates and the absence of changing clonal
                                                                                                                         underpinning the persistent pro-tumourigenic                  The distinct methylome of CAFs provides a novel
resistance are currently unknown, and knowledge of             dynamics also indicated nongenomic mechanism(s)
                                                                                                                         phenotype of the tumour microenvironment are                  epigenetic hallmark of the cancer microenvironment
relevant biomarkers is limited. The presence of a small        of resistance occurring in these patients. Furthermore,
                                                                                                                         unknown. Using whole-genome bisulphite sequencing,            and promises new biomarkers to improve interpretation
number of androgen receptor splice variants has been           we found no evidence of AR alterations, splice variants
                                                                                                                         we show for the first time that cancer-associated             of diagnostic samples.
linked to treatment resistance, however, these are not         or overexpression, nor did we observe an enrichment
                                                                                                                         fibroblasts (CAFs) from localised prostate cancer
present in all cases. We conducted a trial to investigate      or depletion of ERG fusions in treatment-resistant
the underlying causes of neo-adjuvant treatment                samples. Broadly similar transcriptional profiles were
resistance in high-risk prostate cancer.                       observed in treated vs. untreated patients, however,
                                                               we observed an enrichment of stemcell markers and
We selected high-risk, clinically localised prostate
                                                               pathways involved in epigenetic regulation. These
cancer patients who participated in an openlabel,
                                                               data indicated that further study into epigenetic
non-randomised neo-adjuvant trial. Patients were
                                                               mechanisms is necessary to elucidate ADT treatment
treated with a mix of ‘super-castration’ drugs 6 months
                                                               resistance in aggressive prostate cancer.

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28 | New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018                                                                                            New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018 | 29
FLASH TALK 10:                                                                           SESSION 3                     FLASH TALK 11:                                                                            SESSION 3
Structured interview and user manual for the selection and development                                                 The smac-mimetic birinapant as a targeted therapy for
of cancer support group leaders                                                                                        triple-negative breast cancers
Amanda Pomery                                             anchored rating scales; produced a user manual to            Najoua Lalaoui                                               the efficacy of the clinical candidate smac-mimetic
Sir Peter MacCallum Oncology Department,                  facilitate standard delivery of the structured interview;    Walter and Eliza Hall Institute                              birinapant on different subtypes of breast cancer. We
Cancer Experiences Research,                              piloted the structured interview to improve clinical                                                                      found a differential sensitivity to birinapant amongst
                                                          utility; field tested the structured interview to develop    Merino Delphine, Francois Vaillant, Goknur Giner,            breast cancer subtypes. The Triple Negative Breast
The University of Melbourne
                                                          a rational scoring model.                                    Diep Chau, Bhupinder Pal, James Whittles,                    Cancers (TNBC) were more sensitive to birinapant
A/Prof Miranda Xhilaga, Prof Penelope Schofield,                                                                       Gordon Smyth, David L. Vaux, Jane E. Visvader,               compare to ER+ breast cancers. Birinapant killing in
A/Prof Karla Gough                                        Results: Expert consensus was reached on 52 KSA to           Geoff J. Lindeman and John Silke.                            TNBC was dependent on TNF, TRAIL and caspases
                                                          be minimum standards for the role, and content and
Peer support groups have emerged as a community-led                                                                    Breast cancer characteristics can predict treatment          activation. Transcriptomic analysis using the TCGA
                                                          structure of the proposed structured interview. Pilot
approach to accessing support and connecting with                                                                      responses and patient outcomes. Treatment decisions          database revealed that the expression of genes
                                                          study with 3 cancer agency workers (interviewers)
others with cancer experiences. However, little was                                                                    are based on the expression of three hormonal receptors:     encoding positive regulators of smac-mimetic killing
                                                          and 12 cancer group leaders (interviewees) found
known about qualities required to lead a peer support                                                                  ER, PR and HER2. Hormonal therapies are the mainstay         were higher in TNBC in comparison to ER+ breast
                                                          the structured interview to be fit-for-purpose: 56 of
group or how to determine suitability for the role.                                                                    treatment for hormone responsive breast cancer               cancers. Our study demonstrated that a ‘smac-mimetic
                                                          60 ratings on suitability questions were concordant
                                                                                                                       patients, while chemotherapy is the only option for          gene signature’ could be used to predict responsiveness
Aim: To produce the first pragmatic and consensus-        (93%) and 139 of 156 ratings of readiness questions
                                                                                                                       patients with hormone receptor negative tumours. Key         to smac-mimetic and that ER+ expression is responsible
based minimum standards to guide cancer agencies          were concordant (89%). 62 current group leaders
                                                                                                                       challenges are to identify new drugs that are efficacious    for smac-mimetic resistance. Importantly, we showed
with selection and development of cancer support          participated in the field test. Leader characteristics and
                                                                                                                       with fewer undesirable side effects, and to match them       that the combination of birinapant with chemotherapy
group leaders and a structured interview with user        responses to questions were summarised, with a cut off
                                                                                                                       with the subtype of breast cancer that will respond.         was superior to chemotherapy alone in the treatment
manual to enable standard delivery.                       score for suitability for the role determined.
                                                                                                                       Smac-mimetics block Inhibitor of Apoptosis (IAP)             of TNBC PDX in vivo. Altogether our study provides the
Methods: Systematic review to identify potential          Conclusion: We have developed a fit-for-purpose and                                                                       rational for the clinical evaluation of smac-mimetic in
                                                                                                                       protein function, resulting in cancer cell death. Using
knowledge, skills and attributes (KSA) of support group   acceptable structured interview and user guide, for the                                                                   therapy for TNBC.
                                                                                                                       patient-derived xenograft (PDX) models, we evaluated
leaders described in peer-reviewed literature; online     selection and development of cancer support group
reactive Delphi method with an interdisciplinary          leaders. A more comprehensive pool of participants and
panel of experts to produce a relevant and appropriate    result scores is recommended to determine a complete
structured interview of questions with behaviourally      rational scoring model.

30 | New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018                                                                                         New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018 | 31
FLASH TALK 12:                                                                         SESSION 3                   ORAL 10:                                                                                  SESSION 4
Combinatorial targeting by microRNAs coordinates post transcriptional                                              A pilot randomised controlled trial of an online mindfulness-based program
control of breast cancer EMT                                                                                       for people diagnosed with melanoma
Joe Cursons                                               This may in part explain why over 130 different miRNAs   Lahiru Russell                                              Results: Sixty-nine (58 %) eligible participants were
Walter and Eliza Hall Institute                           have a demonstrated role in directing epithelial-        Peter MacCallum Cancer Centre                               randomized (46 in the intervention; 23 in the control
                                                          mesenchymal transition (EMT), a reversible phenotypic                                                                group); mean age was 53.4 (SD: 13.1); 54% were female.
Katherine A Pillman, Kaitlin Scheer, Philip A Gregory,    switch underlying both normal and pathological           Anna Ugalde, Liliana Orellana, Donna Milne,                 Study completion rate across both arms was 80%.
Momeneh Foroutan, Soroor Hediyeh Zadeh,                   processes. In a human mammary cell model of EMT,         Mei Krishnasamy, Richard Chambers, David Austin             The intervention was found helpful by 72% of the 32
John Toubia, Edmund J Crampin, Gregory J Goodall,         we observe not only post-transcriptional responses to    and Patricia M Livingston                                   respondents. The intervention significantly reduced the
Cameron P Bracken, Melissa J Davis                        miRNA perturbation, but also extensive and distributed   Purpose: This study assessed the feasibility and            severity of FCR compared to the control group (mean
MicroRNAs (miRNAs) are important components of the        transcriptional changes, suggesting miRNAs both          acceptability of an online mindfulness-based                difference=-2.55; 95% CI:-4.43, -0.67; p=0.008).
systems that regulate gene expression, functioning        reinforce and buffer transcriptional output. Further,    intervention (MBI) for people at high risk of melanoma
                                                                                                                                                                               Conclusions: This online MBI was feasible and
in part by facilitating the degradation of target         we demonstrate that miR-200 family members act in        recurrence. The potential benefit of the MBI on fear of
                                                                                                                                                                               acceptable by people at high risk of melanoma
mRNA transcripts. MiRNAs frequently target mRNAs          concert with the miR-182/-183 family to coordinate       cancer recurrence (FCR), worry, rumination, perceived
                                                                                                                                                                               recurrence. It significantly reduced FCR severity in this
encoding transcription factors which themselves           the reverse MET process, with combinatorial activity     stress and trait mindfulness was also explored.
                                                                                                                                                                               sample. Patients valued accessing the program at their
control miRNA expression, thus establishing feedback      allowing miRNA function at dramatically reduced          Methods: Participants who have completed treatment          own pace and convenience. This self-guided intervention
mechanisms that can control complex phenotypic            concentrations, whilst alleviating some off-target       for stage 2c or 3 melanoma were recruited from an           has the potential to help survivors cope with emotional
change. Many studies demonstrate miRNA function           effects. Together these results show that the            outpatient clinic and randomly allocated to either          difficulties. An adequately powered randomised
using overexpression at levels greatly exceeding          combinatorial activity of miRNAs should be addressed     the online MBI (intervention) or usual care (control).      controlled trial to test study findings is warranted.
physiological abundance, which can lead to effects on     when studying their endogenous regulatory effects.       The 6-week online MBI comprised short videos, daily
transcripts with relatively poor sequence overlap.
                                                                                                                   guided meditations and automated email reminders.
                                                                                                                   Participants were asked to complete questionnaires
                                                                                                                   at baseline and at 6-weeks post-randomisation. Study
                                                                                                                   feasibility and acceptability were assessed through
                                                                                                                   recruitment rates, retention, and participant feedback.
                                                                                                                   Clinical and psychosocial outcomes were compared
                                                                                                                   between groups using linear mixed models.

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32 | New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018                                                                                    New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018 | 33
ORAL 11:                                                                                 SESSION 4                      ORAL 12:                                                                                   SESSION 4
Pro-survival protein Mcl-1 is a promising therapeutic target                                                            Mechanistic investigations into acquired resistance to BH3 mimetics
in mantle cell lymphoma                                                                                                 in primary CLL
Michael Dengler                                           To explore the potential of directly inhibiting Mcl-1 for     Rachel Thijssen                                              idea, we compared the development of resistance in
Walter and Eliza Hall Institute                           treating MCL, we exposed a panel of MCL cell lines to         Walter and Eliza Hall Institute                              isogenic TP53-null lines to their wild-type counterparts
                                                          the new specific Mcl-1 inhibitor S63845. Four of five                                                                      in long-term cultures. Also, it seems likely that the
Marco J. Herold, Andrew W. Roberts and                    cell lines tested were very sensitive to the inhibitor.       M.A. Anderson, C.E. The, D.H. Gray, A.W. Roberts,            microenvironment for the CLL cells (lymphoid tissues)
Jerry M. Adams                                            Furthermore, Mcl-1 inhibition showed synergy when             D.C.S. Huang                                                 could influence response to venetoclax. To explore this
Aberrant expression of apoptosis-regulating               combined with targeted therapies, such as the Bruton’s        The impairment of apoptosis is a crucial attribute           further, we set up a model system culturing primary CLL
Bcl-2 family members can promote malignant                tyrosine kinase inhibitor ibrutinib or ABT-199.               of many cancers. In chronic lymphocytic leukemia             cells with feeder cells expressing hCD40L and cytokine
transformation and resistance to therapy. Direct                                                                        (CLL), this is driven by overexpression of the survival      IL-21 to mimic the CLL-T cell interaction, as well as
                                                          To confirm these results in a more clinically relevant
inhibition of Bcl-2 itself using the Bcl-2-specific                                                                     protein BCL2. Targeting BCL2 with the BH3 mimetic            IgM to stimulate the B-cell receptor. We analyzed CLL
                                                          setting, we are testing the efficacy of the Mcl-1 inhibitor
antagonist ABT-199 (venetoclax) has already shown                                                                       compound venetoclax has proven to be highly effective        samples before, during and after 6 weeks of culture
                                                          in primary samples from MCL patients, using CD40L-
great promise for hematologic malignancies in the                                                                       for patients with relapsed or refractory (R/R) CLL; the      with a panel of 42 antibodies that detect expression of
                                                          expressing feeder cells to mimic the microenvironment.
clinic. The Bcl-2-relative Mcl-1 is also deregulated in                                                                 overall response rate (ORR) was ~80% in the early            key markers by CyTOF (mass spectrometry by Cytometry
                                                          Initial tests show sensitivity of primary MCL cells to
many blood cancers and hence may also be a promising                                                                    phase clinical trial. However, the disease progresses        by Time of Flight). Our preliminary results suggest that
                                                          S63845. Although CD40L-stimulation can modulate
therapeutic target.                                                                                                     within two years of commencing venetoclax in ~50%,           the microenvironment selects for CLL cells with altered
                                                          S63845 action, we find that cell death can be restored
                                                                                                                        notably in those with complex karyotypic abnormalities.      expression of BCL2 proteins, possibly accounting for
Mantle cell lymphoma (MCL) is an aggressive form of       by combination treatment strategies.
                                                                                                                        Using validated laboratory models, we are attempting         their resistance.
non-Hodgkin lymphoma that typically responds only
                                                          Together, our findings strongly suggest that Mcl-1            to address whether such karyotypic abnormalities
transiently to chemotherapy. Hence, new therapeutic                                                                                                                                  Taken together, our ongoing studies will help us
                                                          is crucial for maintenance of MCL. It represents a            promote the acquisition of resistance and if so, how.
approaches are urgently needed. To establish whether                                                                                                                                 understand why resistance emerges and have
                                                          promising therapeutic target for this and related             The tumor suppressor TP53 is often lost in CLL: even
Mcl-1 is critical for maintaining MCL cell survival, we                                                                                                                              significant implications for how venetoclax is best used,
                                                          malignancies and might well circumvent their                  though its deletion or mutation does not impact upon
first tested the impact of acute Mcl-1 knockout using                                                                                                                                for preventing the development of therapy resistance or
                                                          frequently observed resistance to current therapies.          venetoclax sensitivity, we hypothesized that its loss
an inducible CRISPR/Cas9 system. Intriguingly, its                                                                                                                                   to develop strategies to tackle resistance.
                                                                                                                        might promote the acquisition of resistance. To test this
knockout triggered spontaneous apoptosis in most MCL
cell lines tested.

34 | New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018                                                                                          New Frontiers in Cancer Research – VCCC Postdoctoral Symposium 2018 | 35
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