HITTING PAY DIRT 2020-21 AGRI-FOOD YEARBOOK - ONTARIO AGRI-FOOD INNOVATION ALLIANCE

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HITTING PAY DIRT 2020-21 AGRI-FOOD YEARBOOK - ONTARIO AGRI-FOOD INNOVATION ALLIANCE
ONTARIO AGRI-FOOD INNOVATION ALLIANCE

                                       Volume XXXVII · Number 1 · Summer 2021

HITTING PAY DIRT
Healthy soil yields dividends
Pages 12–18

2020–21 AGRI‑FOOD YEARBOOK
HITTING PAY DIRT 2020-21 AGRI-FOOD YEARBOOK - ONTARIO AGRI-FOOD INNOVATION ALLIANCE
Investing in innovation for real-world returns
I am very honoured to intro-
  duce this year’s Agri-Food
Yearbook.
                                                                             W      elcome to Canada’s food
                                                                                    university, where our
                                                                             shared mission is to improve life.
   Ontario is a world leader                                                   At the University of Guelph,
in agri-food research, and I                                                 we are leaders in research
am proud to see some of the                                                  and teaching to support the
advancements that are being                                                  agri-food sector in Ontario,
made in the sector. I want to                                                Canada and around the globe
express my strong appreciation                                               and to address some of the most
to the many researchers and                                                  pressing issues facing our world
partners that make these devel-                                              today.
opments possible.                                                              Through cross-campus col-
   The Ontario Ministry of                                                   laborations, our experts work
Agriculture, Food and Rural                                                  to create a safe and sustain-
Affairs and the University of                                                able global food system that
Guelph are long-standing partners that support the Ontario                   ensures health and prosperity along the food chain from farmers
Agri-Food Innovation Alliance. The important work being done                 to consumers. Those collaborations include our One Health
continues to develop innovative products and best practices for              approach that brings together varied disciplines to tackle global
our farmers to improve the efficiency, profitability and sustainabil-        challenges at the intersection of human, animal and environ-
ity of their operations and to support strong rural communities.             mental health.
   I know that this past year has not proceeded as anyone had                   Our research partnerships extend to numerous organizations
expected, but it has emphasized the importance of responsive                 beyond campus and include our long-time alliance with the
and robust food systems. Research and innovation will help to                Ontario Ministry of Agriculture, Food and Rural Affairs. With
strengthen these systems, create jobs and further reinforce Ontario’s        OMAFRA funding provided through the Ontario Agri-Food
agri-food reputation on the global stage.                                    Innovation Alliance, our experts solve real-world challenges and
   Over the years, the Ontario Agri-Food Innovation Alliance                 generate ideas and innovations that support and strengthen the
has resulted in many research successes, and this year’s edition             agri-food sector locally and worldwide.
of the Agri-Food Yearbook highlights just some of those latest                 We take pride in the achievements of our researchers, teachers,
accomplishments.                                                             students and partners at the University of Guelph. I encourage
   Thank you all for your dedication, and I wish you all continued           you to learn more about how agri-food research and innovation
success in the coming years.                                                 at U of G helps to ensure better lives for us all.

    Ernie Hardeman                                                              Dr. Charlotte Yates
     inister of Agriculture, Food and Rural Affairs
    M                                                                           President and Vice-Chancellor
    Government of Ontario                                                       University of Guelph

2   Research Magazine 2020–21 Agri-Food Yearbook Edition                Photos: courtesy Grain Farmers of Ontario (top); courtesy OMAFRA (left) and University of Guelph (right)
HITTING PAY DIRT 2020-21 AGRI-FOOD YEARBOOK - ONTARIO AGRI-FOOD INNOVATION ALLIANCE
Volume XXXVII · Number 1
                                           Contents
Summer 2021

PUBLISHER                                                  Investing in innovation for real-world returns 2
Office of the Vice-President (Research)
University of Guelph
Guelph, ON N1G 2W1                                         FEATURE: RESEARCH DURING THE PANDEMIC 4–7
uoguelph.ca/research
rcinfo@uoguelph.ca
                                                           Research builds resilience 4
VICE-PRESIDENT, RESEARCH                                   Monitoring the spread of COVID-19 over Twitter 4
Dr. Malcolm Campbell
                                                           Helping farmers cope with the pandemic 5
ASSOCIATE VICE-PRESIDENT, RESEARCH
(AGRI-FOOD PARTNERSHIP)
                                                           Front-line workers get boost with food
Dr. Beverley Hale
                                                           scientists’ sanitizing technology 6
EDITOR AND INTERIM DIRECTOR,
RESEARCH COMMUNICATIONS                                    Say hello to more automated shopping 7
Liz Snyder                                            5
EDITOR
                                                           Sampling wild bee pollinators in
Dr. Owen Roberts
                                                           commercial fruit crops 8
CONTRIBUTING EDITOR
Jill Davies                                                Making wasps feel at home — that’s good for canola 9
COPY EDITOR
Andrew Vowles
                                                           Farmer-led research programs highlight
                                                           on-farm innovation 10
DESIGN AND LAYOUT
Lind Design                                                Digital mapping offers a sharp view of Ontario soil 11
CONTRIBUTING WRITERS
Jill Davies                                                FEATURE: CROP ROTATION COUNTS 12–18
Robyn Meerveld
Rob O’Flanagan                                             Celebrating 65 years of long-term rotation research 12
Owen Roberts                                               Stable soil, high yields and sustainability 13
Joey Sabljic
                                                      6    A long-term look at cover crops 14
STUDENTS PROMOTING AWARENESS
OF RESEARCH KNOWLEDGE (SPARK)                              Answering cover crop questions 14
Otaiba Ahsan
Caitlin Ford                                               Higher yield 15
Mya Kidson                                                 More resilient during dry years 16
Karli Longthorne
Maleeka Singh                                              Improves soil nitrogen-use efficiency 17
Dianne Priamo                                              Improves soil health 18
ADDRESS CORRESPONDENCE TO:
Research Communications
Room 451, University Centre
                                                           Economics suggests cover crops can pay off 19
University of Guelph, Guelph, ON N1G 2W1
                                                           Biocomposites make vehicle manufacturing greener 20
519-824-4120, Ext. 53781
rcinfo@uoguelph.ca                                         New collaborative streams for aquaculture research 21
PUBLICATION MAIL AGREEMENT NUMBER
40064673                                              13   Understanding the pig gut microbiome will
                                                           help producers manage their herds 22
ISSN 0841-9494
                                                           A new approach to preventing and controlling
@UofGResearch                                              pneumonia in beef cattle 23
                                                           Microhazels 24
                                                           Simcoe research centre helps growers
                                                           establish 1,000 acres of hazelnuts 25
                                                           Fighting antibiotic resistance in Ontario dairy cattle 26
                                                           These micro-veggies are poised for major impact 27
                                                           Food safety essential for market success 29
                                                           Small-town clinic offers big-time experiences 30
                                                      26   Growing Ontario solutions 31

Cover photo: courtesy Grain Farmers of Ontario             Research Magazine 2020–21 Agri-Food Yearbook Edition 3
HITTING PAY DIRT 2020-21 AGRI-FOOD YEARBOOK - ONTARIO AGRI-FOOD INNOVATION ALLIANCE
Research builds resilience
T
       he Ontario Agri-Food Innovation Alliance believes research and innova-
       tion are at the heart of a dynamic, competitive and sustainable agri-food
       sector — at home and around the world. But research also breeds resilience
       in unpredictable ways.
   Long-term, stable investment in agri-food about the disease. And hospitals have a quick,
and rural research — like the investment made effective way to decontaminate personal pro-
through the Ontario Agri-Food Innovation tective equipment used on the front lines.
Alliance — helps fuel innovative solutions to    “University of Guelph researchers tackled
unexpected, pressing challenges and makes challenges related to the COVID-19 pandemic
the agri-food sector nimbler and more head-on, demonstrating agility and resource-
responsive when these challenges have been fulness to devise innovative solutions,” says Dr.
overcome.                                       Malcolm Campbell, vice-president (research).
   The stories on the first four pages of this “Thanks to the ongoing, stable investment from
publication show how existing research paths the Ontario Ministry of Agriculture, Food
were quickly adapted to meet needs stemming and Rural Affairs, Alliance-funded research
from COVID-19. Mental health resources for has yielded unexpected dividends in the face           Hospitals have a quick, effective way to
farmers will help producers cope with new of a crisis, benefiting the agri-food sector and        decontaminate personal protective equipment
                                                                                                  used on the front lines, thanks to Alliance-funded
COVID-19 stressors. Research into avian Ontarians and generating local solutions to
                                                                                                  research.
influenza has been tweaked to gather data global COVID-19 challenges.”

Monitoring the spread of COVID-19 over Twitter
This social media tool can help detect pandemic hot spots

                                                                         capacity to spread further.           to detect tweets containing key-
                                                                            Originally focused on tracking     words for signs and symptoms
                                                                         global outbreaks of avian influ-      such as fever, aches and short-
                                                                         enza, the research has recently       ness of breath, helping research-
                                                                         expanded to use social media to       ers look for early indications of
                                                                         predict waves of COVID-19.            a rise in cases and, potentially,
                                                                           “Even with the distribution         new waves.
                                                                         of vaccines, early warning sys-          The system allows research-
                                                                         tems are important,” says Sharif,     ers to gather valuable informa-
                                                                        “because they can help minimize        tion about signs and symptoms
                                                                         the spread to different areas.”       even before laboratory results
                                                                           An early detection system using     are determined. This data may
                                                                         social media or Google searches       then be used by officials to apply
| By Mya Kidson                       A veterinary and computer          shows promise for tracking other      appropriate public health guide-
                                    science research team led by pro-    fast-spreading diseases besides       lines, which may involve closing

S
    ocial media gives us more       fessors Dr. Rozita Dara, School      COVID-19.                             borders or limiting the opening
    than just a platform to share   of Computer Science, and Dr.            For avian flu, AI has been used    of non-essential businesses.
    photos and status updates       Shayan Sharif, Department of         to gather tweets mentioning the
with friends and family. It also    Pathobiology, has developed a        disease; these tweets are then           The research on avian influenza
helps researchers and public        system using artificial intelli-     sorted and analyzed to show              is funded in part by the Ontario
health officials track outbreaks    gence (AI) and machine learn-        where the disease is spreading.          Ministry of Agriculture, Food and
of infectious disease such as       ing to detect outbreak locations        For the coronavirus causing           Rural Affairs through the Ontario
COVID-19.                           and predict infectious diseases’     COVID-19, AI has been used               Agri-Food Innovation Alliance.

4   Research Magazine 2020–21 Agri-Food Yearbook Edition                                                 Photo: courtesy Keith Warriner · Illustration: Lind Design
HITTING PAY DIRT 2020-21 AGRI-FOOD YEARBOOK - ONTARIO AGRI-FOOD INNOVATION ALLIANCE
Online mental health supports are more important now than ever.

Helping farmers cope
with the pandemic                                                                                                        Dr. Andria Jones-Bitton

| By Karli Longthorne                                                 intended to increase knowledge of common          barrier to online help.

T
                                                                      mental illnesses, help people recognize the         “There are very few things that are as inte-
        he COVID-19 pandemic has taken                                associated signs and symptoms and connect         gral to a healthy population and environment
        a toll on mental health in rural                              them with appropriate resources for help.         as agriculture, with farmers being responsi-
        Ontario — particularly on farmers.                              “As we continue to adapt to COVID-19            ble for providing safe, high-quality food,” she
        University of Guelph research has                             and bounce back from the restrictions and         says. “And we know that they experience a
        shown farmers are already at high risk                        the negative impact it has had, mental health     high degree of stress related to poor mental
for conditions such as depression and anxi-                           literacy will be really important now and in      health, largely in relation to the production
ety. The pandemic has exacerbated stressors                           the future,” says Jones-Bitton.                   of that food, so it’s important that farmers
related to their jobs, including food chain                              This program can also help users start a       are provided with the support that they need
disruptions, temporary foreign worker short-                          conversation with someone who may be              and deserve.”
ages, low grain prices and a dearth of rural                          struggling with mental health challenges and
mental health professionals.                                          connect them with appropriate supports.            In the Know was funded by the Egg Farmers of
   To help address poor mental health in                              Farmers have described a number of barri-          Ontario, Ontario Pork, Ontario Sheep Farmers,
agriculture, University of Guelph profes-                             ers to seeking help for mental illness, such as    the Ontario Federation of Agriculture, and the
sor Dr. Andria Jones-Bitton, Department                               challenges in connecting with their family         Ontario Ministry of Agriculture, Food and Rural
of Population Medicine, and post-doc                                  doctor or specialized counselling services at      Affairs through the Ontario Agri-Food Innovation
Dr. Briana Hagen have partnered with the                              a distance.                                        Alliance.
Canadian Mental Health Association, Ontario                              In a recently published report, “Rural
division, to make their “In the Know” train-                          mental health during COVID-19,” Jones-             Trillium Mutual donated $50,000 to the
ing available across the Ontario agricultural                         Bitton and Dr. Kathleen Kevany, a professor at     Canadian Mental Health Association, Ontario
community. It’s the continuation of research                          Dalhousie University and the president of the      division, to partner with researchers in
that began in 2015; Jones-Bitton is considered                        Canadian Rural Revitalization Foundation,          sharing In the Know with Ontario agricultural
a leader and pioneer in this field.                                   recommended that these supports be moved           communities.
   In the Know’s goal is to develop mental                            online during COVID-19.
health literacy among farmers and the                                    However, Jones-Bitton notes that poor           The rural mental health report is available
people who work with them. The training is                            internet access in many rural areas remains a      at crrf.ca/ri-mentalhealth.

Photos: Cameron Ogilvie (top) and courtesy Andria Jones-Bitton (bottom)                                    Research Magazine 2020–21 Agri-Food Yearbook Edition 5
HITTING PAY DIRT 2020-21 AGRI-FOOD YEARBOOK - ONTARIO AGRI-FOOD INNOVATION ALLIANCE
One Clean Flow device can sanitize up to 800 N95 masks per hour.

Front-line workers get boost with
food scientists’ sanitizing technology
Inspired by the                           | By Dianne Priamo                 the gas phase-advanced oxida-       and Court Holdings, refined the
call to help battle                                                          tion process. It generates highly   technology. The Clean Flow

                                          W
the coronavirus,                                 hen U of G food scientists antimicrobial hydroxyl radicals      system found applications in
                                                 Dr. Keith Warriner and Dr. from the ultraviolet degradation     decontaminating a broad range
U of G researchers                               Mahdiyeh Hasani heard of hydrogen peroxide and ozone.           of fresh produce, from lemons to
adapted their food                        about front-line workers’ battle      This process was commercial-     strawberries.
safety technology to                      to secure personal protective ized in 2015 as the Clean Flow              Flash forward to 2020 and the
decontaminate N95                         equipment (PPE) to shield them- system and used to decontami-          COVID-19 pandemic. Inspired
masks. The mask-                          selves from the COVID-19 virus, nate apples destined for candied       by the call to help battle this virus,
sanitizing unit, Clean                    a light went on. They thought apple production, through a col-         Warriner and Hasani adapted
                                          they could help — and they did.    laboration with Paul Moyer of       the technology to decontam-
Flow Healthcare Mini,                       The story starts nearly 15 years Moyers Apple Products. Clean        inate N95 masks. The Clean
was born.                                 ago, when Warriner developed Works Inc., a company estab-              Flow Healthcare Mini — a mask-
                                          a food safety technique called lished by Moyers Apple Products         sanitizing unit — was born.

6   Research Magazine 2020–21 Agri-Food Yearbook Edition                                                                       Photo: courtesy Keith Warriner
HITTING PAY DIRT 2020-21 AGRI-FOOD YEARBOOK - ONTARIO AGRI-FOOD INNOVATION ALLIANCE
Say hello to more
   “My thoughts went right to
 our technology,” says Warriner.
“It ticks all the boxes on what
                                                  automated shopping
                                                  It’s effective at limiting contact in grocery stores
 constitutes an ideal mask                        during the pandemic
 decontamination method, and I
 knew the research could make a                   | Mya Kidson                                             Self-checkout machines were originally

                                                  T
 difference.”                                                                                           established in grocery stores to speed up
    Proper sanitation is essen-                              echnological advancements in shop- shopping and increase convenience for
 tial when reusing PPE such as                               ping systems, particularly automated consumers. In the pandemic, the machines
 masks. Warriner’s device can                                shopping, have shown value during also help eliminate direct interaction with
 sanitize up to 800 N95 masks                                the COVID-19 pandemic. Dr. Simon cashiers and can reduce contagion risk if
 in one hour, all without dam-                               Somogyi, a professor in the School of regularly cleaned.
 aging the integrity of the masks.                 Hospitality, Food and Tourism Management,               For customers hesitant to shop in-store,
After being tested and approved                    has looked at consumer behaviour patterns food box subscriptions have been a great
 for mask decontamination by                       in grocery stores and how technological alternative, says Somogyi. People can order
 Health Canada in April 2020,                       advancements can limit contact between online, and their food box is shipped directly
 Clean Flow units were delivered                    shoppers.                                           to their door, contact-free. Food boxes such
 to hospitals and health-care facil-                                                                                  as HelloFresh and Goodfood
 ities across the country.                                                                                            allow people to choose recipes
    Clean Works, the Niagara-                                                                                         and receive pre-measured ingre-
 based company that produces                                                                                          dients to reduce food waste.
 Clean Flow, increased production                                                                                        Somogyi says further logical
 to meet the growing demand. As                                                                                       advancements he expects to
 well, it’s expanding to a new facil-                                                                                 see in retail store environments
 ity in St. Catharines, partly sup-                                                                                   include “smart” packaging. Also
 ported by the Ontario Moving                                                                                         called intelligent packaging, this
 Forward Fund. The expansion                                                                                          technology involves real-time
 will create at least 20 new jobs as                                                                                  data enabling companies to
 manufacturing ramps up.                                                                                              identify and track objects with
    Warriner believes that his inno-                                                                                  identification tags.
 vation could be further modified                                                                                        With support from the
 to handle other types of PPE or                                                                                      Gryphon’s LAAIR program, he is
 even health-care items like face                                                                                     learning how customers use their
 shields, goggles, catheters or sur-                                                                                  smartphones and other devices
 gical gowns, in addition to con-                                                                                     to scan tags and instantly pay for
 sumer goods such as electronics.                                                                                     products instead of purchasing
A Niagara go-kart track is even                                                                                       them at a checkout lane.
 using the system to decontami-                                                                                          Consumers wary of in-store
                                           Self-checkout machines reduce contact between shoppers and employees.
 nate crash helmets.                                                                                                  shopping have also driven a rise
    Warriner says the applications                                                                                    in online food sales. Numerous
 are endless. “It’s a gentle process.                 “The pandemic has created challenges when stores and restaurants now offer curbside
 It’s waterless, it’s effective and it’s           it comes to implementing safety protocols in pickup and delivery options. Online shop-
 very quick.”                                       stores,” says Somogyi. “COVID-19 has shown ping also enables smaller businesses to adapt
                                                   us the value of alternative shopping methods to less-than-optimal conditions.
  This research was funded by                      when physical distancing measures need to               These alternative shopping methods are
  Mitacs, Ontario Centres of                       be implemented.”                                     convenient and improve safety during the
  Excellence, the Natural Sciences                     Grocery stores are an essential business, so pandemic, says Somogyi, adding that auto-
  and Engineering Research Council,                they were required to quickly change their mated shopping is likely here to stay.
  and the Ontario Ministry of                      operations to allow for physical distancing
  Agriculture, Food and Rural Affairs              when the pandemic started. Some turned to              This research is funded by the Ontario Ministry
  through the Ontario Agri-Food                     self-checkout machines and online food box            of Agriculture, Food and Rural Affairs through
  Innovation Alliance.                              subscriptions.                                        the Ontario Agri-Food Innovation Alliance.

Photo: iStock/Koonsiri Boonnak                                                            Research Magazine 2020–21 Agri-Food Yearbook Edition 7
HITTING PAY DIRT 2020-21 AGRI-FOOD YEARBOOK - ONTARIO AGRI-FOOD INNOVATION ALLIANCE
Sampling wild bee pollinators
in commercial fruit crops
Wild bee communities in Ontario apple orchards can assist in pollination services

| Dianne Priamo

A
          pple crops rely on pollinators to
                                                                                                            Tips for encouraging
          reproduce, so growers often spend
          thousands of dollars every year to                                                                pollinators
          house and manage honeybee colo-                                                                          Make small changes
          nies. However, previous studies have                                                                     to orchard manage-
shown that, when diverse and abundant, wild                                                                 ment. Plant native flower
bees can provide significant pollination ser-                                                               species nearby and create
vices in orchards. Depending on the apple                                                                   field margins with open dirt
variety, growers may be able to use fewer hives                                                             patches.
or none at all.
  Working with OMAFRA staff, research-                                                                             Practise targeted
ers from the University of Guelph set out to                                                                       integrated pest
explore wild pollinators in Ontario orchards                                                                management, including
and to encourage management practices that                                                                  using non-chemical
will help these species thrive.                                                                             alternatives when possible
   In summer 2019, undergraduate student                                                                    and avoiding spraying when
Sisley Irwin worked with OMAFRA spe-                                                                        bees are active.
cialists Hannah Fraser and Kristy Grigg-
McGuffin and Dr. Nigel Raine, School of                                                                            Pollinators are more
Environmental Sciences, to assess native bee                                                                       active on warm,
abundance and diversity in Ontario apple                                                                    sunny days. Consider this
orchards. They focused on observations                                                                      factor when evaluating
and collections through the bloom period                                                                    native pollinator presence.
of the ‘Gala’ variety as well as collections of
co-blooming varieties.                                                                                            Sampling at the right
  “We wanted to develop baseline informa-                                                                         time is important for
tion on who the various visitors to apple blos-                                                             successful pollinator
soms might be,” says Irwin. “Knowing which                                                                  assessment. Sample
native bees are present in these fruit crops                                                                extensively throughout the
can provide an opportunity to encourage best                                                                bloom period and across
management practices to support the native                                                                  multiple apple varieties.
species and their needs.”
   Native pollinator species better suited to
local climate and weather conditions may
be more effective than managed honeybee
colonies.                                         the orchards. Certain orchards had more wild         “By assessing populations of wild pollina-
   Previous Ontario orchard studies showed        pollinators than others, possibly due to dif-      tors on their own farms and making small
scant wild bee activity, but the sampling         ferences in the landscape ecology of the sites     changes in management of their surroundings,
methods underestimated both abundance and         and pest management practices – factors that       growers can improve native bee success and
diversity of those pollinator species. Irwin’s    warrant further study.                             improve pollination on their orchards,” says
study, conducted on four Norfolk County             “The landscapes between sites were dif-          Irwin.
orchards, used more extensive sampling that       ferent,” says Irwin. “Many of the wild bees
accounted for variations in bee activity with     represented in the surveys are ground-nesting       This research project was funded by the Ontario
bloom stage, apple variety, weather conditions    species, and greater levels of available nesting    Ministry of Agriculture, Food and Rural Affairs
and time of day.                                  habitat can be critical in maintaining these        through the Ontario Agri-Food Innovation
   The researchers identified 32 species among    populations.”                                       Alliance.

8   Research Magazine 2020–21 Agri-Food Yearbook Edition                                                                        Photo: courtesy Sisley Irwin
HITTING PAY DIRT 2020-21 AGRI-FOOD YEARBOOK - ONTARIO AGRI-FOOD INNOVATION ALLIANCE
Research on parasitic wasps by Dr. Rebecca Hallett (inset) can help mitigate swede midge invasions in canola crops.

Making wasps feel at home
– that’s good for canola
| Owen Roberts and Rob O’Flanagan                   Cache Bay-area grain and oilseed farmer                       cess and population dynamics of invasive

I
                                                 Hubert Beaudry, president of the Ontario                         insects, and impacts of natural enemies on
     n 2012, northern Ontario canola farmers Canola Growers’ Association, says Hallett’s                          pest populations.
     noticed an unusual pest creeping into their research has made a big difference to the                           One aspect of her work with canola has
     fields, one they’d never before seen — and industry.                                                         involved studying the invasive parasitic wasp
     one that didn’t respond to conventional       “Dr. Hallett’s research helped growers                         that attacks the swede midge. Along with the
     pesticides.                                 understand the life cycle of the swede midge                     Ontario Ministry of Agriculture, Food and
  While they didn’t know what it was, it and encouraged us to manage the pest in a                                Rural Affairs, she’s looking at the impact of
quickly became clear it was decimating their more economically and environmentally                                the wasp on the pest population and how to
production. They needed help, and they friendly way, by adopting best management                                  make canola fields more hospitable to the wasp.
turned to University of Guelph entomologist practices that are more efficient than using                            Another aspect of her research looks at
Dr. Rebecca Hallett.                             chemical control to manage swede midge,”                         providing wasp food sources, such as nectar-
   That outreach turned into a productive he says. “The discovery of a parasitic wasp                             providing plants like sweet alyssum — attract-
partnership. Through lab and field work, she was also great news that swede midge could                           ing more of the insects to canola fields and
and her team not only identified the pest as eventually be controlled biologically.”                              enhancing their longevity.
the swede midge but proceeded to work with          In the School of Environmental Sciences,                         Hallett is also an expert in the pepper
growers to create a sustainable, environmen- Hallett focuses on agricultural ecosystem                            weevil, which decimates pepper crops in the
tally friendly management plan — which now health through improved pest management.                               greenhouse industry, and the cyclamen mite,
includes using parasitic wasps that prey on        “The goal is always to develop management                      which damages strawberry crops. In current
the midge.                                       programs that can reduce pest populations                        studies, she hopes to improve detection meth-
   The knowledge growers gained from below levels that are economically damaging                                  ods and reduce pest damage.
Hallett’s work also prompted them to expand and to do that by minimizing reliance on
their acreage of fall-planted winter canola. pesticides,” she says.                                                 Hallett’s research was funded in part by the
This crop grows quickly in the spring and is        She’s interested in all things related to                       Ontario Canola Growers Association and
hardy enough by the time the swede midge herbivorous insects and agroecosystems,                                    the Ontario Agri-Food Innovation Alliance, a
arrives — around the second or third week in including chemicals in plants that influence                           collaboration between the Government of
June — that it can withstand insect pressure.    insect interactions, factors affecting the suc-                    Ontario and the University of Guelph.

Photos: courtesy Ontario Agri-Food Innovation Alliance (main) · courtesy Rebecca Hallett (inset)    Research Magazine 2020–21 Agri-Food Yearbook Edition 9
HITTING PAY DIRT 2020-21 AGRI-FOOD YEARBOOK - ONTARIO AGRI-FOOD INNOVATION ALLIANCE
Farmer-researcher
                                         Heather Newman holding
                                         a Chantecler chicken. In
                                         2019 Newman tested a
                                         reduced protein ration
                                         diet on her Chantecler
                                         chickens, a dual-
                                         purpose bird and one of
                                         Canada’s only heritage
                                         breeds of chickens.

                                         Farmer-researcher
                                         Ronaldo Eleazar. Eleazar
                                         and his wife, Myriam,
                                         conducted a screening
                                         trial in 2020 to narrow
                                         down varieties of
                                         amaranth that grow
                                         well in southern Ontario.
                                         They will continue their
                                         investigations with a
                                         randomized, replicated
                                         multi-farm variety trial
                                         of the top varieties in
                                         2021.

 Farmer-researcher Ryan Spence and farm apprentice Becky Porlier seeding peas and oats in late August 2019 as part of Spence’s randomized complete block trial
 looking at no-till broccoli production in northern Ontario.

 Farmer-led research programs
 highlight on-farm innovation
                                          | Mya Kidson                        in developing research questions                      farmer-researchers and on others

                                          F
                                                                              and conducting projects on their                      who learn about the on-farm
“No one knows their                            ield trials on the farm own farms, working in coopera-                              research results.
  farm better than the                          follow applied research tion with a support organization.                             “No one knows their farm
  actual farmer,” says                          projects once they leave the    Dr. Erin Nelson, Department                         better than the actual farmer,”
                                                lab bench. Field trials are a of Sociology and Anthropology,                        says Nelson. “And no one knows
  Dr. Erin Nelson. “And                   great way to gather on-farm per- and her team — Dr. Sarah                                 the specific issues that go on at
  no one knows the                        spectives, and the province-wide Hargreaves, research director                            the farm more than the actual
  specific issues that                    network of research centres with the Ecological Farmers                                   farmers do.”
  go on at the farm                       owned by the Government of Association of Ontario (EFAO);                                   The farmer-led research
  more than the actual                    Ontario through its agency, the Alexandra English, executive                              approach has its roots in the
  farmers do.”                            Agricultural Research Institute of director of EFAO; and Dr. Anne                         global South, particularly Latin
                                          Ontario, is home to many inno- Bergen, director of Knowledge                              America. More recently, the
                                          vative field studies.               to Action Consulting Inc. — are                       methodology has grown in pop-
                                             A complementary approach analyzing the impacts of such                                 ularity around the world, includ-
                                          is for producers to take the lead programs on the participating                           ing in Canada.

 10   Research Magazine 2020–21 Agri-Food Yearbook Edition                                             Photos: courtesy Erin Nelson (insets) and Isabelle Spence-Legault (main image)
The EFAO has been at the
forefront of bringing farmer-led
research to Canada, initiating a
program in 2016. To date, the
organization has supported more
than 70 farmers in conducting
more than 100 scientific trials on
their farms; its efforts were rec-
ognized with a 2019 Excellence
in Agriculture Award from the
Ontario Ministry of Agriculture,
Food and Rural Affairs.
   Creating opportunities for
farmers to take the lead on
research projects means they can
target specific challenges that may
not present themselves in wider
studies — and they can do so in
                                         This image shows the points across Ontario where soil data is available. Dr. Asim Biswas will use this data
a way that is practical for their        to develop provincial maps.
farm and transferable to others.

                                        Digital mapping offers a
Ontario is rich in diverse and
unique agriculture, along with
varying soil types, microclimates

                                        sharp view of Ontario soil
and many agricultural commod-
ities. On-farm studies accommo-
date that variability, says Nelson.
   This research also allows farm-
ers to collaborate with each other
and to have researchers visit to        | Maleeka Singh                                          Ontario Soil Information System and Ontario

                                        S
discuss challenges and opportu-                                                                  soil map at 100-metre resolution, meaning
nities. Since their most trusted               oil mapping provides farmers and policy           each pixel is 100 metres by 100 metres. They
source of information is other                 makers with detailed information on               hope to complete the project by early 2022.
farmers, farmer-led research has               the condition and characteristics of land.           To create the soil database and a data-shar-
knowledge transfer built in and                   Traditional soil mapping, in which a           ing protocol, Biswas and his team have col-
farmers feel confident to share         surveyor collects soil samples and maps their            lected more than 7,500 data points across
their findings after going through      locations, was an important first step toward            Ontario. This will help farmers and policy
the rigorous steps to conduct           better soil conservation and environmental               makers develop appropriate policies to pri-
research.                               sustainability.                                          oritize soil management, including soil con-
   As for the effectiveness of this        However, it doesn’t provide the kind of               servation policies.
approach, Nelson and her team           broad picture now possible through digital                  Biswas expects his findings to be available
have surveyed 140 farmers con-          soil mapping based on greater computational              online to policy makers, conservation author-
nected to EFAO’s farmer-led             power and availability of environmental data.            ities, farmers, scientists and the public.
research program and are com-              Digital soil mapping offers an array of
piling the results now.                 advantages such as a more objective approach               Asim Biswas’s research team includes students
  “The farmers are the backbone         to characterizing soil and the ability to predict          and researchers at the University of Guelph as
of this work,” she says. “They’re       soil condition and properties.                             well as collaborators from the Ontario Ministry
doing incredibly innovative               “Traditional soil mapping is like painting               of Agriculture, Food and Rural Affairs (OMAFRA);
things on their farms.”                 with a big brush,” says Dr. Asim Biswas, a                 Agriculture and Agri-Food Canada; the Ontario
   The full research reports,           professor in the School of Environmental                   Ministry of the Environment, Conservation and
including audio summaries by            Sciences. “Digital soil mapping can help us                Parks; McGill University; Dalhousie University;
farmer-researchers, can be found        create a standardized and unified soil map                 University of Saskatchewan and international
at efao.ca/research-2020.               across Ontario with granularity.”                          partners.
                                           Digital soil mapping allows for fine reso-
  This research project is funded       lution, using mathematical models, statistical             This research is funded by the Natural Sciences
  in part by the Ontario Ministry of    calculations and satellite data to create a soil           and Engineering Research Council, the Canada-
  Agriculture, Food and Rural Affairs   database and understand the factors that con-              France exchange program, the Indo-Shastri
  through the Ontario Agri-Food         trol soil development.                                     exchange program and OMAFRA through the
  Innovation Alliance.                     Biswas and his team aim to create an                    Ontario Agri-Food Innovation Alliance.

Map: courtesy Asim Biswas                                                        Research Magazine 2020–21 Agri-Food Yearbook Edition 11
Crop Rotation Counts

        Years of data collected from long-term rotation test plots can inform best practices for farmers.

   Celebrating 65 years of
 Rotation Counts
                                                                                                                         confounded,” he says. “That is
                                                                                                                         the real value of the LTRPs— you
                                                                                                                         can compare the impact of system

 proves soil nitrogen use efficiency
   long-term rotation research
                                                                                                                         changes within a given soil and
                                                                                                                         system environment.”
                                                                                                                            The results of LTRP trials at
ce your dependence on nitrogen fertilizer for corn by adding a small grain cereal (e.g.,                                 thewinter
                                                                                                                              Elora and Ridgetown sites
                                                                                                                         have shown great success in
 ) to your farm’s corn-soybean rotation and underseed it to red clover. Research shows that
                                                                                                                         determining which rotations
ons with   wheat
       | Caitlin Fordand red clover have more available soil nitrogen                       for your      corn   crop. Reduce

       C
                                                                                   and managed      by the   University  yield the healthiest crops and
nses and avoid paying for increasingly costly fertilizer by improving                            your rotation.
                                                                                   of Guelph through       the Ontario soil. This research has specifically
                 hanges in soil productivity can take years to Agri-Food Innovation Alliance. determined that adding a small
                 manifest, which means on-farm trial and error University of Guelph researchers grain cereal like wheat into soy-
 fits of adding       a smallrotations
                                   grain iscereal           to your    corn-soybeanformance at rotation:
                                                                                  have been measuring crop per- bean and corn rotations is espe-
                 for different                   challenging     for farmers                      the Ridgetown and cially beneficial.
                 to conduct independently. That’s where long- Elora sites for 25 and 40 years,                              Other key findings include
 eases available termsoil   nitrogen
                        research  comes in, to help farmers have the respectively.                                       improvements in nutrient return,
y because winterhealthiest   soil, highest
                    wheat increases    soil yield and greatest profits.              With 65 combined years of drought-resilient crops, improved
nic matter and improves soil health                                               LTRP research data available, cover crops and increased avail-
                                               Decades-long investigations farmers are able to see the tan- able nitrogen in the soil. These
                                            have been conducted at the gible benefits of crop rotation results translate to direct cost-sav-
                                            Ontario Crops Research Centres without the need for every farm ing benefits for farmers who can
                                            in Ridgetown and Elora. These to conduct its own trial.                      expect increased yields of crops
                                            government-owned stations have            Dr. Bill Deen, a professor that are more resilient during dry
                                            been operating long-term  Maintains
                                                                           rota- whocrop       yield
                                                                                         recently    retired from the seasons and require less fertilizer
                                            tion plots (LTRPs) — fields
                                                                      withthat    Department
                                                                             less nitrogen        of Plant Agriculture, to grow.
                                                                                             applied
                                            rotate  between
                                                          N a number of dif- ran experiments at the Elora site             “Society will benefit if agri-
N                 N           N                N
       N     N           N
                                       N    ferent crops — to study improve- from 2000 to 2020.         Stable  Annual Yield
                                                                                                            He oversaw   culture strongly adopts rotation
                                                          N
    N    N N      N   N      N   N              N in commodities
                                          N ments                    produced numerous long-term projects diversity,” said Deen. “A good
                                                     N
                                            there.                                 including a rotation trial that sustainable system has to start
                                               The overall goal for these test began in 1980, a tillage trial with rotation diversity. Good
                                                                      Less
       The overall goal for                 plots is to improve crop resilience    started in 1976 and a nitrogen in rotations increase yield, and
 uces these
        fertilizer  costsis to
              test plots                    and benefit the agri-food
                                                                      nitrogen
                                                                         sector
                                                                      fertilizer   maize  trial started in 2008.         LTRPs definitely provide insights
ks to reduced dependence on nitrogenbyfertilizer lowering    costs, increasing       “Whenever      you’re   looking at  into what constitutes a resilient
       improve crop resilience
                                            profits and improving soil health. cropping systems’ effects, they cropping system.”
       and benefit the Nitrogen
                          agri-food
                                  fertilizer required
                                               The research centres where have to be compared side by side
       sector by lowering costs,            these test plots are located are in the same environment, other-               For more information, visit
       increasing profits and               owned by the Agricultural wise you start comparing across                      uoguelph.ca/alliance/
       improving soil health.               Research Institute of Ontario environments and they become                     crop-rotation.

        12   Research Magazine 2020–21 Agri-Food Yearbook Edition                                                    Photo: courtesy Ontario Agri-Food Innovation Alliance
Crop Rotation Counts

 Stable soil, high yields and sustainability
| By Dianne Priamo                                                                                                         able 70-per-cent decrease in
                                                                                                                           nitrate loss in the diverse rotation

F
     or decades, researchers car-                                                                                          using cover crops compared to
     rying out long-term crop                                                                                              the conventional crop rotation.
     rotation trials have found that                                                                                       Because it was a particularly wet
diversification improves yield sta-                                                                                        year, nitrogen that would have
bility. Now, a long-term study is                                                                                          leached from the soil was instead
under way at the Ontario Crops                                                                                             taken up by the cover crops and
Research Centre – Elora using                                                                                              then remained in the soil as part
new technology to investigate the                                                                                          of the plant biomass.
mechanisms at play in the soil that                                                                                          Wagner-Riddle says the results
account for these improvements.                                                                                            won’t be this striking every year.
The ultimate goal is to determine                                                                                          But the accumulation of these
best practices for producers.                                                                                              effects over time is expected to
   Since 2016, Dr. Claudia                                                                                                 benefit producers economically
Wagner-Riddle, research tech-                                                                                              by reducing fertilizer use and
nician Sean Jordan, their collab-                                                                                          improving yield stability as the
orators and a team of graduate                                                                                             crops become more resilient to
students from the University of                                                                                            extreme weather events — not
Guelph have observed the effects                                                                                           to mention the environmental
of different crop rotations and                                                                                            benefits, like reducing nitrogen
cover crops using 18 soil lysime-                                                                                          runoff into water sources and
ters — one-square-metre cylinders                                                                                          recapturing atmospheric carbon
embedded 150 cm into the soil                                                                                              dioxide back into the soil.
to give unique insight into water                                                                                            “In the next few years, we
gain and loss. This study is the                                                                                           expect to have some really inter-
first of its kind in North America.                                                                                        esting analysis coming out of this
  “There’s evidence that diverse                                                                                           facility, which will help both pro-
crop rotation pays off long-term,                                                                                          ducers and the environment,” says
but it’s not clear why that’s the                                                                                          Wagner-Riddle.
case,” says Wagner-Riddle, a
professor in the School of                                                                                                   Collaborators on this research
                                          Soil lysimeters give insight on soil health, air and water quality.
Environmental Sciences. “We                                                                                                  include graduate student Jared
speculate that it’s related to water,                                                                                        LaPierre; co-adviser Dr. Hugh Henry,
so the soil lysimeter facility is the perfect way everything is working, but the reward is that                 Western University; the Ontario Soil and Crop
to investigate this factor and its effects on the we get a very comprehensive data set.”                        Improvement Association; and Grain Farmers
soil.”                                                    The 18 lysimeters are split between two soil          of Ontario. The lysimeter facility was funded by
   Sensors embedded in each lysimeter at types: loamy soil extracted on site and sandy                          the Canada Foundation for Innovation and the
five depths help the researchers “see” soil soil from around Cambridge, Ont. A number                           Ontario Ministry of Research, Innovation and
water tension, carbon dioxide concentration, of plots in each soil type use a conventional                      Science.
temperature and electroconductivity. Water crop rotation of soybean-soybean-corn,
samples are also collected at these depths to while the others use a more diverse rotation                      This project is funded by an NSERC Strategic
measure nitrate and phosphate content, while of soybean-winter wheat-corn with cover                            Partnership Grant and the Ontario Ministry of
air sampling occurs at the soil surface to mon- crops planted in the off season — a mix of oats,                Agriculture, Food and Rural Affairs through the
itor greenhouse gas flux.                              daikon radish, crimson clover or rye grass.              Ontario Agri-Food Innovation Alliance.
   The sensors yield millions of data points              The researchers intend to continue study-
every day, with processing and quality assur- ing the effects of crop rotation on a long-term                   The Ontario Crops Research Centre – Elora is
ance overseen by research associate Shannon basis. Although the project has undergone                           owned by the Government of Ontario through
Brown.                                                 only one full crop rotation, data analysis from          its agency, the Agricultural Research Institute
  “The biggest challenge is the constant tech- 2017 to 2018 revealed significant advantages                     of Ontario, and managed by the University of
nical operation of this facility,” says Wagner- in the diverse crop rotation.                                   Guelph through the Ontario Agri-Food Innovation
Riddle. “It takes many people to make sure                Results from this period showed a remark-             Alliance.

Photo: Cameron Ogilvie                                                                          Research Magazine 2020–21 Agri-Food Yearbook Edition 13
Crop Rotation Counts                                                                                      Crop Rotation Counts

 M.Sc. student Matt Stewart at the long-term cover crop experiment.

A long-term look at cover crops                                                                      Answering
                                                                                                     cover crop
| Dianne Priamo                                 determine which rotations reap the greatest

F
                                                environmental benefit, while also providing
       rom mid-summer until the follow- economic value to grain producers.
       ing spring, some Ontario fields lie         So far, the project has undergone only a

                                                                                                     questions
       fallow while others are covered with few complete crop rotation cycles. Although
       crops designed to rejuvenate the soil. the benefits of cover crops are expected to
       University of Guelph researchers are accrue over a longer period, Raizada says,
investigating various combinations of cover preliminary findings point toward improved
crops to see which ones offer the best envi- nitrogen availability in the soil.
ronmental and economic improvements.               The researchers have also observed many
   This long-term study is being conducted similarities between the trials in Elora and              • Long-term crop and soil research at
at the Ontario Crops Research Centre sites Ridgetown. The breadth of temperature and                    the Ontario Crops Research Centre
in both Elora and Ridgetown, coordinated weather conditions experienced between                         sites in Elora and Ridgetown answers
by plant agriculture professors Dr. Manish the two locations means the results of this                  questions about soil health, tillage
Raizada and Dr. Dave Hooker, respectively. research will apply to many temperate regions                and environmental impact of cover
   In total, they’re overseeing more than 1,100 worldwide.                                              crops.
research plots. Numerous faculty members          “I believe our findings will be quite gener-
from the Department of Plant Agriculture alizable, not just in southern Ontario but in               • The findings from these trials are
and the School of Environmental Sciences temperate environments around the world,”                      summarized in the tear-out info-
are involved, with the potential for even more. says Raizada.                                           graphic series Crop Rotation Counts
  “We’ve created a research platform with this                                                          (pages 15 to 18), created by the
project,” says Raizada.                           Collaborators include Drs. Tejendra Chapagain,        Ontario Agri-Food Innovation Alliance
   Unlike other cover crop studies, Raizada       Bill Deen, Kari Dunfield, Erik Glemser, Peter         in partnership with Soils at Guelph.
and Hooker’s research employs multi-mixes,        Johnson, Ralph Martin, Kim Schneider, Laura Van
or different combinations of cover crops          Eerd, Claudia Wagner-Riddle and Anne Verhallen,    • While crop rotation does count—for
among two crop rotations and two tillage          and officials from the Grain Farmers of Ontario.      increasing yields, improving resilience
systems in the long term. Three of Ontario’s                                                            during dry years, improving soil health
main field crops — soybeans, corn and winter      This research project is funded by Grain Farmers      and maintaining crop yield with less
wheat — are being grown in different rota-        of Ontario, the Canada First Research Excellence      nitrogen applied—there are other
tions, followed by either a variety of cover      Fund, the Natural Sciences and Engineering            established environmental benefits
crops or the same cover crop each year.           Research Council, and the Ontario Ministry of         of cover cropping, such as reducing
   Factors being studied include drought resil-   Agriculture, Food and Rural Affairs through           soil erosion, reducing nutrient loss,
iency, soil nitrogen status and organic matter,   the Ontario Agri-Food Innovation Alliance. The        reducing pest populations and
surface runoff, silage value and porosity — the   Ontario Crops Research Centre is owned by the         improving water management, in
ability of water to penetrate through the soil.   Agricultural Research Institute of Ontario and        addition to sequestering soil carbon
The researchers are directly comparing the        managed by the University of Guelph through           and potentially mitigating climate
effects of multi-mixes and sole cover crops to    the Ontario Agri-Food Innovation Alliance.            change.

14   Research Magazine 2020–21 Agri-Food Yearbook Edition                                            Photos: courtesy Dave Hooker (left) · courtesy Bill Deen (right)
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                                                                                                                                                                   ReadRead  the winter
                                                                                                                                                                         the scientific
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1 Van1Eerd
        VanL.L.,  for
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                            K., Hayes
                                  K., Hayes
                                      A., Verhallen
                                             A., Verhallen
                                                    A., Hooker
                                                           A., Hooker
                                                                D. (2014).
                                                                      D. (2014).
                                                                           Long-term
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                                                                                     tillage tillage
                                                                                             and and
  crop rotation
        crop rotation
                effectseffects
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                                                                              Canadian
                                                                                    Canadian
                                                                                       JournalJournal
                                                                                               of Soilof
                                                                                                      Science
                                                                                                         Soil Science
                                                                                                                94:303-315.
                                                                                                                      94:303-315.                                   papers,
                                                                                                                                                                       papers,
                                                                                                                                                                            available
                                                                                                                                                                                 available
                                                                                                                                                                                      at at
                                                                                                                                                                    uoguel.ph/crop-rotation.
                                                                                                                                                                       uoguel.ph/crop-rotation.

                                             Celebrating
                                                 Celebrating
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                                                         65 years
                                                             65 years
                                                                  of long-term
                                                                       of long-term
                                                                                cropcrop
                                                                                     rotation
                                                                                         rotation
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                                                                                                     research
                                                                                                          research
    40 40
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                                                                                                        and soilandresearch
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                                                                                                                                      generates
                                                                                                                                           the evidence
                                                                                                                                                  the evidence
                                                                                                                                                      Want
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          1 Gaudin A.C.M., Janovicek K., Deen B., Hooker D.C. (2015). Wheat improves nitrogen use efficiency of    Station
                                                                                                                       and  Ridgetown
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                                                                                                                                         CampusCampus
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