Hippocampal granule cell dispersion: a non-specific finding in pediatric patients with no history of seizures

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Hippocampal granule cell dispersion: a non-specific finding in pediatric patients with no history of seizures
Roy et al. Acta Neuropathologica Communications                  (2020) 8:54
https://doi.org/10.1186/s40478-020-00928-3

 RESEARCH                                                                                                                                             Open Access

Hippocampal granule cell dispersion: a
non-specific finding in pediatric patients
with no history of seizures
Achira Roy1, Kathleen J. Millen1,2 and Raj P. Kapur1,3,4*

  Abstract
  Chronic epilepsy has been associated with hippocampal abnormalities like neuronal loss, gliosis and granule cell
  dispersion. The granule cell layer of a normal human hippocampal dentate gyrus is traditionally regarded as a
  compact neuron-dense layer. Histopathological studies of surgically resected or autopsied hippocampal samples
  primarily from temporal lobe epilepsy patients, as well as animal models of epilepsy, describe variable patterns of
  granule cell dispersion including focal cell clusters, broader thick segments, and bilamination or “tram-tracking”.
  Although most studies have implicated granule cell dispersion as a specific feature of chronic epilepsy, very few
  “non-seizure” controls were included in these published investigations. Our retrospective survey of 147 cadaveric
  pediatric human hippocampi identified identical morphological spectra of granule cell dispersion in both normal
  and seizure-affected brains. Moreover, sections across the entire antero-posterior axis of a control cadaveric
  hippocampus revealed repetitive occurrence of different morphologies of the granule cell layer – compact, focally
  disaggregated and bilaminar. The results indicate that granule cell dispersion is within the spectrum of normal
  variation and not unique to patients with epilepsy. We speculate that sampling bias has been responsible for an
  erroneous dogma, which we hope to rectify with this investigation.
  Keywords: Hippocampus, Granule cell dispersion, Human, Epilepsy, Dentate gyrus, Temporal lobe epilepsy, Gliosis

Introduction                                                                             putative hippocampal abnormalities are the cause or ef-
Chronic epilepsy is often associated with several patho-                                 fect of epilepsy [14, 25].
logical hippocampal abnormalities [44]. These include                                      GCD has been reported commonly in the dentate
sclerosis, characterized by neuronal loss in both dentate                                gyrus (DG) of seizure patients and considered a hallmark
gyrus and Ammon’s horn, gliosis, mossy fiber sprouting;                                  of chronic epilepsy, especially TLE [3, 21, 30, 35, 55, 56].
as well as granule cell dispersion (GCD), which is ob-                                   GCD was also reported to be pronounced in sudden un-
served in the presence or absence of sclerosis [9, 10, 15,                               explained deaths in infants [26, 31]. Many studies using
30, 55, 56]. These studies were mostly performed in sur-                                 animal models have similarly concluded that hippocam-
gical resections or autopsied brain samples obtained                                     pal GCD is a specific feature of chronic epilepsy [40, 43,
from patients suffering from febrile seizures and tem-                                   60]. The granule cell (GC) layer is generally observed as
poral lobe epilepsy (TLE); it is unclear whether the                                     a highly compact layer of neuronal cell bodies in the
                                                                                         dentate gyrus. GCD refers to broadening with or without
                                                                                         bilamination of the GC layer, often blurring the bound-
* Correspondence: raj.kapur@seattlechildrens.org
1
 Center for Integrative Brain Research, Seattle Children’s Research Institute,
                                                                                         ary between the GC layer and molecular layer of the
Seattle, Washington, USA                                                                 dentate gyrus [8, 17]. Additionally, some surgical cases
3
 Department of Pathology, Seattle Children’s Hospital, Seattle, Washington, USA          also demonstrated the existence of focal clusters of
Full list of author information is available at the end of the article

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Hippocampal granule cell dispersion: a non-specific finding in pediatric patients with no history of seizures
Roy et al. Acta Neuropathologica Communications   (2020) 8:54                                                  Page 2 of 20

granule cells outside the regular GC layer [54]. GCD has        related criteria were abstracted from the archived re-
been most consistently correlated with a history of se-         cords: age, gender, post-mortem interval (i.e. duration
vere febrile or infection-induced seizures during early         between time of death and that of autopsy), presence or
life (< 4 years age), as well as with duration and fre-         absence of seizure history (and seizure interval from on-
quency of epileptic events [30, 36, 54].                        set until death for epileptic patients) and major clinical
   Criteria for determining dispersion vary and depend,         or pathological diagnoses. Corrected age was calculated
in part, on the mode of measurement [8]. A variety of           considering 40 gestational weeks (GW) as day 0. Among
diagnostic criteria for GCD has been suggested, varying         the 147 autopsy cases studied, 80 were males and 67
from complex morphometric analyses [24, 37] to sub-             were females, with the corrected age range spanning
jective assessment of dentate gyrus histology [1, 8, 9, 35,     from 19GW (i.e. −21 weeks) to 20.4 years (i.e. +1060
36]. Some reports have suggested abnormal neuronal              weeks). Post-mortem interval (PMI) ranged from 2 to
migration, loss of hilar cells and genetic defects to be re-    336 h.
sponsible for GCD, all influenced by seizure occurrence
[10, 30, 54]. However, a substantial cohort of controls,        Histological assessment of GCD
with no history of seizures, was seldom included in the         Presence or absence of GCD (disaggregated, tram-track)
clinical studies; many lacked even 1 control specimen.          was determined by analyzing hematoxylin-and-eosin
   Although most reports claim GCD to be a unique fea-          (H&E)-stained coronal human hippocampal sections.
ture of epileptic brains, occasional contradictions in ei-      Archived coronal sections of hippocampus, which were
ther the identification or interpretation of GCD have           originally prepared as part of routine autopsy examin-
been published. The first such report identified GCD in         ation, were screened retrospectively by a single observer
two neurologically normal (non-seizure) patients [25].          (AR). All available sections (298 sections from 147 pa-
They suggested that the pathological changes in the DG          tients) were reviewed. For most of the patients, this con-
are not exclusively related to epilepsy, and speculated         sisted of a single section (Control: 79/126, 62.70%;
that GCD may be a separate developmental disorder, in-          Seizure: 12/21, 57.14%); two sections were available for
dependent of TLE [8, 25]. Another study suggested that          26 controls (20.63%) and 2 seizure cases (9.52%), and
GCD is not a common result of recurring seizure occur-          three or more sections for the remainder (Control: 21/
rences originating at an early age, but is more dependent       126, 16.67%; Seizure: 7/21, 33.33%). Criteria for diagno-
on the type of epileptic syndrome [37]. Finally, there are      sis of GCD were the following, irrespective of whether
conflicting data on whether GCD in epileptic patients is        the interfaces between the DG and the hilus or molecu-
due to ectopic GC neurogenesis [6, 20]. At present, there       lar layer were sharp versus diffuse:
is no consensus over the clinical relevance of GCD or its
role in surgical prognosis [8, 9].                               (a) “Disaggregated” GCD: focal broadening of the GC
   We began to question the association between seizures             layer (> 120 μm thickness) without any gaps,
and GCD in the hippocampus, after the phenomenon                 (b) “Tram-track” GCD: focal bilamination of the GC
was observed in cadaveric hippocampi of non-seizure                  layer with a distinct cell-sparse zone between the
patients. In order to better understand GCD and its clin-            inner and outer layers.
ical correlates, we conducted a retrospective assessment
of 147 cadaveric pediatric hippocampi (21 epileptic               In our study, we encountered a few cases with small
cases, 126 controls with no history of seizure), with a         clusters of “ectopic” granule cells in the hilar region (2
focus exclusively on the DG. We based our study on the          seizure cases, 2 controls) or in the DG molecular layer
hypothesis that GCD is not specifically associated with         (1 control, 1 seizure case). These ectopic clusters were
epilepsy and may be a variant of normal or a non-               always associated with TT or DA.
specific alteration associated with a wide variety of brain       Any cases deemed initially as definitive or equivocal
insults.                                                        GCD were re-examined by two observers (AR and RPK)
                                                                to arrive at a consensus diagnosis. No hippocampal sec-
Materials and methods                                           tion was excluded from our analysis. Presence versus ab-
Human hippocampal samples and clinical records                  sence of GCD, along with GCD subtyping, was based on
After appropriate approval from the Institutional Review        pooled data obtained from all hippocampal sections of a
Board, 147 archived H&E-stained, coronal sections of            single patient, including sections from both hippocampi
hippocampus and associated clinical history were ob-            when available. For one control (C-20), the entire hippo-
tained from pediatric patients autopsied at Seattle Chil-       campus was divided coronally into serial tissue slabs
dren’s Hospital between (2014–2019). 126 controls (C,           (each ~ 5 mm thick) along the antero-posterior axis.
no history of seizures) and 21 seizure (SZ) cases were in-      Hematoxylin-eosin (H&E)-stained sections from each
cluded in this retrospective study. The following patient-      slab were examined.
Hippocampal granule cell dispersion: a non-specific finding in pediatric patients with no history of seizures
Roy et al. Acta Neuropathologica Communications   (2020) 8:54                                                 Page 3 of 20

Immunohistochemistry                                            2629482) to visualize nuclei. Sections were cover-slipped
Immunohistochemistry and immunofluorescence were                using Fluorogel mounting medium (Electron Microscopy
performed on ~ 10 control brains and 6 epileptic                Sciences, USA, Cat# 50–247-04). Primary antibodies
brains, chosen based on preliminary tissue histology            used: rabbit anti-Calbindin (Swant, Switzerland, RRID:
and sufficient tissue availability. The chosen cases            AB_2721225), rat anti-CTIP2 (Abcam, UK, RRID:AB_
represent a wide range of overlapping ages in the pa-           2064130), rabbit anti-PAX6 (Biolegend, USA, RRID:AB_
tient and control cohorts (Supplementary Table 1,               2565003), rat anti-TBR2 (anti-EOMES, eBioscience,
Additional File 1). Paraffin-embedded, formalin-fixed,          USA, RRID:AB_11042577), rabbit anti-BLBP (Abcam,
hippocampal tissue blocks (~ 4-5 mm thick) were ob-             UK; RRID:AB_2100476), rabbit anti-IBA1 (FUJIFILM
tained and sectioned at average thickness of 5 μm.              Wako Chemicals, USA; RRID:AB_839504). Immuno-
Sections were then deparaffinized, as mentioned in              stained sections were imaged in Olympus VS-120 slide-
the next section, and immunolabelled with mouse                 scanner microscope using Olympus VS-Desktop 2.9
anti-CD163 (Leica, Germany; RRID:AB_2756375),                   software, and later processed in ImageJ 1.51j8 and Ima-
rabbit anti-SOX2 (Invitrogen, USA; RRID:AB_                     geJ2 (NIH, Bethesda, Maryland, USA) and Olympus VS-
2539862), goat anti-PROX1 (R&D systems, USA;                    Olyvia 2.9 software programs respectively.
RRID:AB_2170716), mouse anti-human CD68 (Dako,                     Each antibody was validated for immunofluorescence/
Denmark; RRID:AB_2074844) and mouse anti-GFAP                   immunohistochemistry by the correspondent manufac-
(Dako, Denmark; RRID:AB_2109952) using a Ventana                turer, and these data are available publicly on the com-
Benchmark II automated immunostainer. PROX1                     pany websites with indicated catalog numbers. This was
immunolabeling needed extra stringent conditions:               also validated by us in our experiments, replicating pub-
treatment with citrate buffer (20 mins, steamer) and            lished/expected expression in appropriate control tissue.
overnight antibody incubation at 4 °C. Other anti-              No outliers were encountered.
bodies were subjected to mild to standard condition-
ing and a short 30 mins of antibody incubation at               Quantitative analysis
37 °C. All sections were then treated with biotinylated         Data was collected from H&E-stained coronal sections.
secondary antibodies (Vector Laboratories, USA,                 Thickness and length measurements of human hippo-
RRIDs: AB_2336123, AB_2313606; Jackson ImmunoR-                 campal GC layer were made using Olympus VS-Olyvia
esearch Labs, RRID:AB_2338586), and later stained               2.9, Olympus VS-Desktop 2.9 (Olympus Corporation,
using the DAB method (Vectastain ABC-Peroxidase                 Tokyo, Japan) and ImageJ2 software programs (NIH, Be-
kits, Vector Laboratories, USA, RRID:AB_2336818).               thesda, Maryland, USA). Maximum GC layer thickness
The sections were finally counterstained with                   in each GCD sample was measured at the region where
hematoxylin.                                                    the layer was the thickest. For the ratio measurement of
                                                                bilaminar GC layers, the entire thickness of the DG was
Immunofluorescence                                              measured – from the edge proximal to the hilus to the
Paraffin-embedded human hippocampal sections were               edge proximal to the molecular layer. The individual
warmed on a hot-plate at approximately 45 °C for 15–            thicknesses of the inner and outer layers were obtained
20 min, to melt the paraffin. Slides were then immedi-          as well. To correlate maximum GC layer thickness ver-
ately transferred to fresh 100% xylene and processed            sus age, cadaveric sections showing compact, DA and
through an ethanol hydration gradient (100, 90, 70, 50%         TT phenotypes were compared with corresponding cor-
ethanol solutions for 5 min each), before immersion in          rected age of death. To plot GCD length as a proportion
distilled water. After deparaffinization, immunofluores-        of total DG length, the inner aspect of the DG was mea-
cence was performed as previously described [48].               sured for 12 controls and 12 seizure cases, using one
Briefly, sections were washed thrice in phosphate buffer        coronal hippocampal section with GCD per sample.
saline (PBS), boiled in 10 mM sodium citrate solution           Statistical significance was assessed using Welch-
for antigen retrieval, blocked in 5% serum in PBS with          corrected t-test (for GCD length/Total length plot) and
0.1% Triton X-100 (0.1% PBX solution) and then incu-            two-way ANOVA followed by Tukey post-hoc test (for
bated overnight at 4 °C with primary antibodies. Sections       GCD proportion plots across groups, age and PMI, GC
were then washed thrice in 0.1% PBX solution, incu-             layer thickness comparison plots, GCD occurrence with
bated with appropriate species-specific secondary anti-         clinical diagnoses). Linear regression was used for the
bodies conjugated with Alexa 488, 568 or 647                    maximum GCD thickness versus age of death plots.
fluorophores (Invitrogen, USA; RRIDs: AB_2534088,               These analyses were performed in GraphPad Prism v7.0
AB_10563566, AB_141778) for 2 h at room temperature             (GraphPad Software Inc., San Diego, USA) and in
and then counterstained with DAPI (4′,6-Diamidino-2-            Microsoft Excel. Differences were considered significant
Phenylindole, Dihydrochloride; Invitrogen, RRID:AB_             at p < 0.05. Data are represented as stacked and regular
Hippocampal granule cell dispersion: a non-specific finding in pediatric patients with no history of seizures
Roy et al. Acta Neuropathologica Communications          (2020) 8:54                                                                    Page 4 of 20

bar graphs and scatter plots with mean ± SEM in Fig. 2                      refer to this as “disaggregated” GCD (DA). The second
and Supplementary Fig. 2 (Additional File 1). Measure-                      subtype has a bilaminar appearance of the GC layer with
ments for Supplementary Fig. 6 were obtained with                           cell-sparse zone in the center [3, 30]; we refer to this as
Nikon Elements BR v3–2 (Nikon Corporation, Tokyo,                           “tram-track” GCD (TT). By studying the H&E-stained
Japan) and final data are represented as mean ± SD.                         hippocampal specimens from patients with seizure his-
                                                                            tory (n = 21), we categorized the morphology of GC layer
Results                                                                     for each as compact (10/21; 47.62%, subtype equivalent
Defining types of GCD in seizure-affected human                             to non-GCP of [8]), only DA (5/21; 23.81%), only TT (1/
hippocampi                                                                  21; 4.76%), or both DA and TT (5/21; 23.81%) (Table 1).
Stereotypically, the human hippocampal GC layer ap-                         Focal granule cell loss was observed in only 1 seizure
pears to have a compact, neuron-dense histology, with a                     case (rigorous morphometric analysis of neuronal dens-
sharp boundary separating the molecular layer (Fig. 1b’,                    ity was not performed). As previously reported [30], we
c,c’). While studying the cadaveric hippocampal samples                     also encountered dispersion and variation in the pattern
from patients with history of epilepsy or seizure, we ob-                   and thickness of the GC layer at the angles and enfolded
served co-existence of compact GC layer and a range of                      regions of both control and seizure-affected hippocampi.
GCD subtypes in the DG (Fig. 1d-d”, e), as originally re-                   However, these areas were excluded from our consider-
ported in hippocampal samples of TLE patients [30].                         ation of “GCD” and also from our quantitative analyses.
These were later classified by Blumcke et al. into differ-
ent categories of DG granule cell pathology (GCP) [8].                      GCD is evident in brains irrespective of the history of
This classification offered 3 major categories – 1) entire                  seizures
DG appears normal, or non-GCP; 2) Type 1 GCP, char-                         While evaluating age-matched cadaveric controls for
acterized by severe cell loss; and 3) Type 2 GCP, that in-                  seizure-affected brain specimens, we serendipitously
cludes at least one DG focus of broadening, clustering or                   identified GCD in some samples. This led us to retro-
duplication of GC layer [8]. In our study, we further sub-                  spectively investigate the presence of GCD in a large set
divided Type 2 GCP category broadly into two subtypes.                      of 126 control human brains, with no history of seizures,
The first is marked by broad, less dense GC layer, often                    and compare the findings with those observed in the 21
with poorly defined borders with the molecular layer; we                    seizure cases (Additional File 2). We identified both DA

 Fig. 1 Cadaveric hippocampi reveal a spectrum of GCD in patients with epilepsy. (a, b, b’) Schematics explaining the coronal sectioning and
 structure of human hippocampus. (c-e) H&E-stained coronal sections of dentate gyrus (DG) from human cadavers, obtained from SCH archives:
 representative images demonstrate a typical structure (c) and compactness of the GC layer (c’) in a control human dentate gyrus (with no history
 of epilepsy/seizure), and GCD in certain seizure cases, ranging from focal “tram-track” (TT) phenotype (d-d”) to more diffused “disaggregated” (DA)
 form (e). Arrowhead indicates outer granular zone distal to hilus; open arrowhead indicates inner granular zone proximal to hilus; bv, blood
 vessel. Scalebars: 1 mm (c, d); 50 μm (c’, d’, d”, e)
Hippocampal granule cell dispersion: a non-specific finding in pediatric patients with no history of seizures
Roy et al. Acta Neuropathologica Communications       (2020) 8:54                                                                           Page 5 of 20

Table 1 List of cadaveric epilepsy cases with recorded clinical features. 21 cadaveric epilepsy cases with history of single or multiple
events of seizures, accompanied with a table of clinical history obtained from the archives of Seattle Children’s Hospital Department
of Pathology (2014–2019), are tabulated. The features analyzed included age of death, gender, post-mortem interval (PMI), presence
or absence of GCD subtypes, clinical diagnoses like seizure interval (from seizure onset until death), evidence of malformation/
anomaly in the central nervous system (CNS), and/or of other CNS (acquired forms of CNS injury such as hypoxic-ischemic
encephalopathy (HIE), cerebral edema) and non-CNS conditions. GW, gestational weeks; TT, tram-track; DA, disaggregated; mo,
months
Code    Age of     Corrected Gender PMI       Seizure Seizure               GCD     Diagnoses
        death      age of                     (Y/N)   interval              (Y/N)
        (GW)       death
                                                                            TT DA CNS malformation/          Other (CNS)         Non-CNS conditions
                                                                                  anomaly
SZ-1a   7 days     7 days     M      12 h     Y       < 24 h                Y   Y   encephalopathy,          –                   Proteus mirabilis septic
                                                                                    seizures                                     shock, coagulopathy
                                                                                                                                 and acidosis, hypoxic
                                                                                                                                 respiratory failure
SZ-2a   6 years    6 years    F      10 h     Y       6 years;              N   N   global developmental     hypoplastic         recurrent pulmonary
                                                      intractable                   delay, chronic seizure   cerebellum          infections
                                                                                    disorder with static
                                                                                    encephalopathy
SZ-3a   16 years   16 years   F      22 h     Y       13 years              N   Y   severe congenital        severe gliosis      acute
                                                                                    neuromuscular            and neuronal        bronchopneumonia,
                                                                                    disorder, complex        loss                cardiac arrest
                                                                                    status epilepticus
SZ-4b   6 years    6 years    M      not   Y          > 5 years; multiple   Y   Y   brain overgrowth         gliosis, mild    congenital
                                     known            episodes till                 with polymicrogyria,     ventriculomegaly diaphragmatic hernia,
                                                      death, intractable            diffused cortical                         coagulopathy, defects
                                                                                    dysplasia, AKT3                           in liver, spleen and
                                                                                    R465W mutation,                           kidney
                                                                                    possibly SUDEP
SZ-5a   3 years    3 years    M      2h       Y       7 weeks; multiple     Y   N   subclinical status       cerebral edema,     pulmonary arrest
                                                      episodes till                 epilepticus              HIE, anoxic brain
                                                      death, intractable                                     injury secondary
                                                                                                             to pulmonary
                                                                                                             arrest
SZ-6a   2 days     2 days     F      21.5 h   Y       2 days (possible      Y   Y   –                        cerebral edema,     acute chorioamnionitis
                                                      seizures)                                              HIE                 with funisitis and
                                                                                                                                 three vessel umbilical
                                                                                                                                 vasculitis
SZ-7a   4 days     4 days     M      38 h     Y       < 24 h                N   Y   –                        HIE                 severe acidosis,
                                                                                                                                 cardiorespiratory
                                                                                                                                 failure, visceral
                                                                                                                                 anomalies
SZ-8a   18mo       18mo       M      26 h     Y       1–3 months of         Y   Y   developmental delay      focal neuronal      abdominal distension,
                                                      age; no further               and seizure disorder     loss and gliosis    brady-cardiac arrest,
                                                      seizures                      (2q21.1 duplication)     in hippocampus      acute pan-lobar
                                                      post-treatment                                                             pneumonia
                                                      of phenobarbital
SZ-9a   2 years    2 years    M      72 h     Y       4 months; multiple N      N   retinoblastoma with      –                   pulmonary edema,
                                                      episodes between              diffuse                                      congestive
                                                       first seizure and            leptomeningeal                               hepatomegaly
                                                      death                         spread and direct
                                                                                    infiltration of brain
                                                                                    and spinal cord
SZ-10a 5 weeks     33GW       F      17.5 h   Y       < 24 h                Y   Y   multiple seizure         hemorrhage and necrotizing
       (28GW)                                                                       events                   necrosis       enterocolitis
                                                                                                             secondary to
                                                                                                             dural venous
                                                                                                             thrombosis.
SZ-11a 12 years    12 years   F      96 h     Y       16 months;            N   N   –                        cerebral edema,     appendicitis
                                                      intractable                                            HIE and brain
                                                                                                             death
SZ-12a 19 years    19 years   M      216 h    Y       14 years;             N   N   seizure disorder         –                   Trisomy 16p/monosomy
                                                      intractable                                                                9p, respiratory distress
                                                                                                                                 syndrome, Pseudomonas
                                                                                                                                 pneumonia, cardiomegaly
Roy et al. Acta Neuropathologica Communications          (2020) 8:54                                                                           Page 6 of 20

Table 1 List of cadaveric epilepsy cases with recorded clinical features. 21 cadaveric epilepsy cases with history of single or multiple
events of seizures, accompanied with a table of clinical history obtained from the archives of Seattle Children’s Hospital Department
of Pathology (2014–2019), are tabulated. The features analyzed included age of death, gender, post-mortem interval (PMI), presence
or absence of GCD subtypes, clinical diagnoses like seizure interval (from seizure onset until death), evidence of malformation/
anomaly in the central nervous system (CNS), and/or of other CNS (acquired forms of CNS injury such as hypoxic-ischemic
encephalopathy (HIE), cerebral edema) and non-CNS conditions. GW, gestational weeks; TT, tram-track; DA, disaggregated; mo,
months (Continued)
Code    Age of      Corrected Gender PMI         Seizure Seizure             GCD     Diagnoses
        death       age of                       (Y/N)   interval            (Y/N)
        (GW)        death
                                                                             TT DA CNS malformation/            Other (CNS)         Non-CNS conditions
                                                                                   anomaly
SZ-13a 7 weeks     39 4/7      F        14 h     Y       6 weeks (possible   N   Y   epilepsy (focal            –                   severe pulmonary
       (32 4/7 GW) GW                                    seizures)                   apoptotic neurons                              hypertension,
                                                                                     within DG)                                     veno-occlusive disease
SZ-14a 8 years      8 years    F        65 h     Y       2 years (sleep      N   N   encephalomalacia,          –                   unbalanced
                                                         EEG done)                   hydrocephalus,                                 chromosomal
                                                                                     seizures,                                      translocation,
                                                                                     developmental delay                            congenital mitral valve
                                                                                                                                    stenosis, heart failure
SZ-15a 7 weeks      7 weeks    F        3h       Y       6 weeks             N   Y   hypotonia and              elevated CSF        –
                                                                                     episodic breathing         and plasma
                                                                                     progressing to             glycine levels
                                                                                     seizures
SZ-16a 17 years     17 years   F        96 h     Y       5 days              N   N   generalized tonic-         acute               Type 1 diabetes,
                                                                                     clonic seizure, brain      hemorrhage,         oligoarticular juvenile
                                                                                     herniation                 edema               arthritis, celiac disease
SZ-17a 17 years     17 years   M        64 h     Y       ~ 17 years;         N   Y   spastic quadriplegia,      white matter        acute kidney injury,
                                                         intractable                 epilepsy, static           gliosis             obstructive apnea,
                                                                                     leukoencephalopathy,                           hypotonia
                                                                                     ventriculomegaly
SZ-18a 8 days       8 days     M        42 h     Y       8 days              N   N   seizures (treated with     brain herniation,   ornithine
                                                         (onset at birth)            antiepileptics)            diffuse cerebral    transcarbamylase
                                                                                                                edema               deficiency,
                                                                                                                                    hyperammonemia,
                                                                                                                                    hepatosplenomegaly
SZ-19a 3 years      3 years    F        15.6 h   Y       2.5 years           N   N   severe craniofacial    neurological       –
                                                                                     malformations, seizure injury, meningitis
                                                                                     history
SZ-20a 4 years      4 years    M        15.5 h   Y       16 months           N   N   seizures (no               subacute diffuse    multiple chromosomal
                                                                                     recurrence post-           CNS                 abnormalities and
                                                                                     treatment with medi-       hemorrhagic         associated chronic
                                                                                     cations), global devel-    necrosis with       health problems,
                                                                                     opmental delay             massive             atypical lymphoid
                                                                                                                intraventricular    hyperplasia, concerning
                                                                                                                blood clot          primary or secondary
                                                                                                                                    immunodeficiency
SZ-21   9 years     9 years    M        2h       Y       2 months            N   N   refractory status          diffuse severe      –
a
                                                                                     epilepticus secondary      gliosis, patchy
                                                                                     to febrile infection-      neuronal loss,
                                                                                     related status epilepti-   dramatic loss of
                                                                                     cus, multiple events       CA1 neurons
a
 based on microscopic evaluation of archived hippocampal sections
b
  case published in [3, 46]; unused right hemisphere was obtained from SCH morgue and pathological studies were done by RPK on the right
hippocampus for the first time for this study

and TT subtypes of GCD in control DG, similar to that                        hoc test, confirmed no significant difference across these
seen in cadaveric epileptic brains (Fig. 2a-d’, Table 2;                     4 groups (p > 0.9996; Fig. 2e). Furthermore, we often ob-
Supplementary Fig. 1, Additional File 1). The proportion                     served the existence of more than one morphological
of each subtype observed in controls was as follows:                         type of GC layer (compact, DA, TT) in the same hippo-
compact (76/126; 60.32%), only DA (27/126; 21.43%),                          campal section, irrespective of the seizure history, con-
only TT (2/126; 1.58%), both DA and TT (21/126;                              sistent with previous reports [8, 21].
16.67%). Statistical analysis between control and seizure
cases, using two-way ANOVA, followed by Tukey post-
Roy et al. Acta Neuropathologica Communications         (2020) 8:54                                                                    Page 7 of 20

 Fig. 2 Cadaveric hippocampi reveal the GCD spectrum in controls with no history of seizures. (a-d’) H&E staining of coronal hippocampal
 sections of control human cadavers, with no history of epilepsy or seizure, revealed the entire spectrum of GCD ranging from focal tram-track (TT)
 to disaggregated (DA) forms, as observed in some seizure cases. Often, TT and DA forms are seen at the same plane of section. Open arrowhead
 indicates inner granular zone proximal to hilus; arrowhead indicates outer granular zone distal to hilus. (e) Frequencies of GCD subtypes in
 seizure cases (11/21) were not significantly different from that in controls (50/126), as determined by two-way ANOVA, followed by Tukey post-
 hoc test (p > 0.9996). (f) Comparison of the maximum thickness of GC layer between control and seizure hippocampal samples, measured as
 shown in (h,i), revealed no significant differences in all DG subtypes – compact, TT, DA. But the maximum GC thicknesses of both TT and DA sets
 were significantly higher than the compact ones (p < 0.0001). (g) Ratios of inner or outer layer thickness to the total GC thickness, as
 demonstrated in (i), showed no significant difference between control and mutant, as well as within each group. Data are represented as 100%
 stacked columns (e), mean ± SEM (f) or mean ratio ± SEM (g) in scatter plots; two-way ANOVA followed by Tukey post-hoc test were performed.
 Differences were considered significant at p < 0.05; ns, not significant. Scalebars: 1 mm (a, b, c, d); 50 μm (a’, b’, c’, d’)

Morphometric measurements of GCD are similar in                             GC layer occurs during the first 8 postnatal months,
seizure patients and controls                                               when immature cells gradually disappear from the sub-
Measuring the maximum thickness of compact, TT and                          granular zone near the hilus [49, 50]. We categorized
DA sub-zones of GC layer demonstrated that both types                       the age of death into bins and calculated the proportion
of dispersed DG were significantly thicker than compact                     of control and seizure cases per bin that demonstrated
DG (p < 0.0001) in control and seizure-affected brains;                     GCD. Statistical analyses showed no significant correl-
however, no significant difference was observed between                     ation between GCD occurrence and the age of death, in
control and seizure cases in thicknesses of either the                      either control or seizure groups (p > 0.2; Supplemen-
compact or dispersed areas (Fig. 2f,h,i). Moreover, for                     tary Fig. 2a, Additional File 1). The PMI for the en-
foci of tram-track GCD, the ratios of the inner or outer                    tire cohort largely varied between 2 h and 336 h.
layer thicknesses to the total (maximum) GC layer thick-                    Comparison of GCD and non-GCD numbers across
ness were not significantly different for both control and                  different PMIs showed no significant correlation be-
seizure-affected brains (Fig. 2g,i). Cell migration to the                  tween development of GCD and PMI in both control
Roy et al. Acta Neuropathologica Communications          (2020) 8:54                                                               Page 8 of 20

Table 2 List of cadaveric controls with recorded clinical features, demonstrating GCD. 50 controls with no history of seizures, that
demonstrated presence of at least one type of GCD in the studied hippocampal section obtained from the archives of Seattle
Children’s Hospital Department of Pathology (2014–2019), are tabulated. Other related clinical features obtained/analyzed were age
of death, gender, post-mortem interval (PMI), presence or absence of GCD subtypes, clinical diagnoses like evidence of
malformation/anomaly in the central nervous system (CNS), and/or of other CNS (acquired forms of CNS injury such as hypoxic-
ischemic encephalopathy (HIE), cerebral edema) and non-CNS conditions. GW, gestational weeks; TT, tram-track; DA, disaggregated;
mo, months
Code   Age of     Corrected Gender PMI       Seizure GCD               Diagnoses
       death      age of                     (Y/N)   (Y/N)
       (GW)       death
                                                     TT DA             CNS malformation/   Other (CNS)                 Non-CNS conditions
                                                                       anomaly
C-1a   1 day      37GW       F      14 h     N       N     Y          large occipital      neuronal                    multiple congenital
       (37GW)                                              (focal DA) encephalocele,       disorganization, HIE        abnormalities
                                                                      focal dysplasia
C-2A, 4 weeks     31GW       M      32 h     N       Y     Y           –                   -                           RH-isoimmunization
C-2Ba (27GW)                                                                                                           hydrops fetalis, liver
                                                                                                                       failure, respiratory
                                                                                                                       distress
C-3a   3 weeks    29GW       M      23 h     N       Y     Y           –                   intraventricular            necrotizing enterocolitis
       (26GW)                                                                              hemorrhage,                 and pneumatosis, sepsis
                                                                                           frontoparietal
                                                                                           periventricular
                                                                                           leukomalacia
C-4a   3 weeks    3 weeks    F      57.5 h   N       Y     Y           –                   diffuse edema               congenital
                                                                                                                       diaphragmatic hernia,
                                                                                                                       coagulopathy, defects
                                                                                                                       in liver, spleen and
                                                                                                                       kidney
C-5a   7 weeks    28GW       M      12 h     N       Y     Y           –                   HIE with                    multi-organ hypoxic
       (27GW)                                                                              periventricular             ischemic injury
                                                                                           leukomalacia
C-6a   2.5mo      10 weeks   F      12 h     N       Y     Y           –                   cerebral atrophy            immunodeficiency
       (term)                                                                                                          disorder of undefined
                                                                                                                       etiology, massive
                                                                                                                       hepatomegaly, active
                                                                                                                       bronchopneumonia,
                                                                                                                       cardiomegaly
C-7a   15 days    30GW       F      6h       N       Y     Y           –                   –                           congenital heart disease,
       (28GW)                                                                                                          acute multifocal
                                                                                                                       pneumonia, congestion
                                                                                                                       and hemorrhage
C-8a   3mo        7 weeks    F      17 h     N       Y     Y           –                   cerebral atrophy with       Trisomy 21, severe
       (35GW)                                                                              HIE, edema                  hepatic fibrosis with
                                                                                                                       cholestasis, pneumonia,
                                                                                                                       cardiac defects, liver
                                                                                                                       and kidney injury
C-9a   2mo        8 weeks    M      20 h     N       Y     Y           –                   remote HIE without          neonatal gastroschisis
                                                                                           acute changes, focal        repair, cardiovascular
                                                                                           cystic periventricular      defects
                                                                                           leukomalacia
C-10a 3mo         12 weeks   F      16 h     N       Y     Y           –                   subacute HIE with           congenital cardiovascular
                                                                                           uncal herniation            defects, 15q26-qter
                                                                                                                       deletion, multi-organ
                                                                                                                       hypoxia
C-11a 7 days      33GW       F      15 h     N       Y     Y           –                   subdural hematoma,          cystic necrosis of liver,
      (32GW)                                                                               diffuse HIE with            respiratory failure,
                                                                                           widespread gliosis and      congested spleen
                                                                                           early mineralization,
                                                                                           periventricular
                                                                                           leukomalacia,
                                                                                           hemorrhage, few
                                                                                           pyknotic and
                                                                                           karyorrhectic cells noted
                                                                                           in hippocampus
Roy et al. Acta Neuropathologica Communications          (2020) 8:54                                                                Page 9 of 20

Table 2 List of cadaveric controls with recorded clinical features, demonstrating GCD. 50 controls with no history of seizures, that
demonstrated presence of at least one type of GCD in the studied hippocampal section obtained from the archives of Seattle
Children’s Hospital Department of Pathology (2014–2019), are tabulated. Other related clinical features obtained/analyzed were age
of death, gender, post-mortem interval (PMI), presence or absence of GCD subtypes, clinical diagnoses like evidence of
malformation/anomaly in the central nervous system (CNS), and/or of other CNS (acquired forms of CNS injury such as hypoxic-
ischemic encephalopathy (HIE), cerebral edema) and non-CNS conditions. GW, gestational weeks; TT, tram-track; DA, disaggregated;
mo, months (Continued)
Code   Age of     Corrected Gender PMI       Seizure GCD               Diagnoses
       death      age of                     (Y/N)   (Y/N)
       (GW)       death
                                                     TT DA             CNS malformation/       Other (CNS)               Non-CNS conditions
                                                                       anomaly
C-12a 2mo         5 weeks    F      8h       N       Y     Y           –                       diffuse mild              complex congenital
      (37GW)                                                                                   cerebral WM gliosis       heart disease,
                                                                                                                         cardiomegaly, aspiration
                                                                                                                         pneumonitis
C-13a 8 years     8 years    F      7h       N       N     Y           –                       hemorrhagic               methylmalonic acidemia,
                                                                                               infarction, mild WM       chronic liver failure,
                                                                                               atrophy, DG               coagulopathy, severe
                                                                                               hypoplasia and            diffuse
                                                                                               neuronal loss, gliosis    bronchopneumonia,
                                                                                                                         recurrent fevers
C-14a 2mo         8 weeks    F      20 h     N       Y     Y           –                       remote HIE without        neonatal gastroschisis
      (term)                                                                                   acute changes, focal      repair, cardiovascular
                                                                                               cystic periventricular    defects, Clostridium
                                                                                               leukomalacia              infection
C-15a 18 days     18 days    M      13.5 h   N       Y     Y           –                       kernicterus involving     Beckwith-Wiedemann
                                                                                               hippocampi, diffuse       Syndrome, respiratory
                                                                                               gliosis with              failure, acute kidney
                                                                                               periventricular           injury, thymic cortical
                                                                                               eukomalacia               stress
C-16a 10 weeks    2 weeks    M      11 h     N       N     Y           –                       –                         liver dysfunction of
      (32GW)                                                                                                             uncertain etiology,
                                                                                                                         cytomegalovirus
                                                                                                                         infection
C-17a 23 days     28GW       M      16.25 h N        Y     Y           –                       severe intracranial       necrotizing enterocolitis,
      (25GW)                                                                                   hemorrhage                severe pneumonia,
                                                                                                                         pulmonary hemorrhage
C-18a 6 years     6 years    F      68 h     N       Y     Y           –                       craniosynostosis          GLIS3 mutation, hepatic
                                                                                               surgery                   fibrosis
C-19a 6 years     6 years    M      15 h     N       Y     Y           diffuse infiltrating    –                         –
                                                                       pontine glioma,
                                                                       mild ventriculomegaly
C-     12 h       38GW       M      38.5 h   N       Y     Y           –                       HIE                       asystole at birth,
20b    (38GW)                                                                                                            bilaterallydilated ureters
                                                                                                                         and bladder, increased
                                                                                                                         extramedullary
                                                                                                                         hematopoiesis
C-21a 3 days      38GW       M      15.75 h N        N     Y           –                       mild HIE and edema        hemorrhagic and
      (38GW)                                                                                                             necrotic small bowel,
                                                                                                                         anomalies in alimentary
                                                                                                                         tract, liver failure
C-22a 8 weeks     2 weeks    M      8h       N       Y     Y           mild                    mild diffuse gliosis of   Pentalogy of Cantrell,
      (34GW)                                                           ventriculomegaly        white matter              left pulmonary artery
                                                                                                                         stenosis
C-23a 10 years    10 years   M      11 h     N       Y     Y           –                                                 immunodeficiency,
                                                                                                                         Pseudomonas and
                                                                                                                         Aspergillus infection
C-24a 3 days      38GW       M      15.75 h N        N     Y           –                       mild edema and HIE        hemorrhagic and
      (38GW)                                                                                                             necrotic small bowel,
                                                                                                                         anomalies in alimentary
                                                                                                                         tract, liver failure
C-25a 17 years    17 years   M      59 h     N       N     Y           –                       –                         recurrent B cell
                                                                                                                         lymphoblastic leukemia
                                                                                                                         and aspergillosis
Roy et al. Acta Neuropathologica Communications          (2020) 8:54                                                                Page 10 of 20

Table 2 List of cadaveric controls with recorded clinical features, demonstrating GCD. 50 controls with no history of seizures, that
demonstrated presence of at least one type of GCD in the studied hippocampal section obtained from the archives of Seattle
Children’s Hospital Department of Pathology (2014–2019), are tabulated. Other related clinical features obtained/analyzed were age
of death, gender, post-mortem interval (PMI), presence or absence of GCD subtypes, clinical diagnoses like evidence of
malformation/anomaly in the central nervous system (CNS), and/or of other CNS (acquired forms of CNS injury such as hypoxic-
ischemic encephalopathy (HIE), cerebral edema) and non-CNS conditions. GW, gestational weeks; TT, tram-track; DA, disaggregated;
mo, months (Continued)
Code   Age of     Corrected Gender PMI       Seizure GCD               Diagnoses
       death      age of                     (Y/N)   (Y/N)
       (GW)       death
                                                     TT DA             CNS malformation/      Other (CNS)                 Non-CNS conditions
                                                                       anomaly
C-26a 4mo         4mo        M      55 h     N       N     Y           axonal mixed           deafness                    growth delay, respiratory
                                                                       sensory/ motor                                     distress
                                                                       neuropathy
C-27a 2mo         term       F      58 h     N       N     Y           –                      periventricular             cardiopulmonary
      (32GW)      (40GW)                                                                      leukomalacia with           abnormalities, congenital
                                                                                              acute HIE                   cardiac anomalies,
                                                                                                                          renomegaly
C-28a 1 week      1 week     M      45 h     N       N     Y           –                      HIE, periventricular        congestion and
                                                                                              leukomalacia with           hemorrhage
                                                                                              prominent gliosis
                                                                                              and neuronal loss
C-29a 10mo        10mo       F      46.5 h   N       N     Y           –                      global chronic HIE,         heterotaxy syndrome,
                                                                                              hippocampus shows           complex congenital
                                                                                              mild loss of neurons        heart disease
                                                                                              in CA1 region
C-30a 3 years     3 years    M      16.5 h   N       N     Y           –                      HIE post cardiac arrest,    asthma, acute sepsis,
                                                                                              early necrosis of           cardiac arrest, stress
                                                                                              hippocampus                 atrophy
C-31a 3mo         101 days   F      13 h     N       N     Y           –                      mild HIE                    respiratory distress,
      (42GW)                                                                                                              pulmonary vein stenosis
C-32a 14 days     30GW       M      16 h     N       N     Y           –                      mild HIE, diffuse gliosis   massive subacute
      (28 week)                                                                               in WM                       hepatic necrosis with
                                                                                                                          iron overload,
                                                                                                                          coagulopathy, chronic
                                                                                                                          neonatal lung disease,
                                                                                                                          multiple organ defects
C-33a 3 years     3 years    M      20.5 h   N       N     Y           global developmental   HIE with edema              myopathy, cardiac
                                                                       delay                                              failure, respiratory
                                                                                                                          failure, infectious
                                                                                                                          diseases, respiratory
                                                                                                                          distress, sepsis
C-34a 5weeks      39GW       F      84 h     N       N     Y           –                      –                           necrotizing enterocolitis
      (33GW)
C-35a 18 h        18 h       M      14 h     N       N     Y           –                      –                           complex congenital
                                                                                                                          heart disease, total
                                                                                                                          anomalous pulmonary
                                                                                                                          venous return,
                                                                                                                          lymphatic distention
C-36a 17 years    17 years   F      69.5 h   N       Y     Y           medulloblastoma,         widespread brain death    pulmonary thrombi
                                                                       brain injury related                               and congestion and
                                                                       to Aspergillus                                     hepatosplenomegaly
                                                                       encephalo-meningitis,
                                                                       lateral ventriculomegaly
C-37a 9 days      9 days     F      31 h     N       N     Y           –                      HIE, brain injury           liver steatosis
C-38a 6 h         1.5 weeks F       78 h     N       N     Y           –                      HIE                         cardiac respiratory
      (41 5/7 GW)                                                                                                         failure, coagulopathy,
                                                                                                                          anemia, severe
                                                                                                                          metabolic acidosis,
                                                                                                                          in-utero feto-maternal
                                                                                                                          hemorrhage
C-39a 16mo        16mo       M      15 h     N       N     Y           –                      multifocal brain            diffuse adherent bowel,
                                                                                              infarction with global      necrotizing soft tissue
                                                                                              HIE (CA1 dispersed)         infections, cardiac
                                                                                                                          arrest history
Roy et al. Acta Neuropathologica Communications              (2020) 8:54                                                                      Page 11 of 20

Table 2 List of cadaveric controls with recorded clinical features, demonstrating GCD. 50 controls with no history of seizures, that
demonstrated presence of at least one type of GCD in the studied hippocampal section obtained from the archives of Seattle
Children’s Hospital Department of Pathology (2014–2019), are tabulated. Other related clinical features obtained/analyzed were age
of death, gender, post-mortem interval (PMI), presence or absence of GCD subtypes, clinical diagnoses like evidence of
malformation/anomaly in the central nervous system (CNS), and/or of other CNS (acquired forms of CNS injury such as hypoxic-
ischemic encephalopathy (HIE), cerebral edema) and non-CNS conditions. GW, gestational weeks; TT, tram-track; DA, disaggregated;
mo, months (Continued)
Code     Age of      Corrected Gender PMI        Seizure GCD               Diagnoses
         death       age of                      (Y/N)   (Y/N)
         (GW)        death
                                                         TT DA             CNS malformation/        Other (CNS)                      Non-CNS conditions
                                                                           anomaly
C-40a 4 weeks        4 weeks    F       24 h     N       Y     Y           –                        mild HIE with mild               truncus arteriosus
                                                                                                    gliosis
C-41a 4 days         27GW       F       144 h    N       N     Y           –                        widespread HIE                   splenic congestion
      (27GW)
C-42a 8 years        8 years    F       15 h     N       N     Y           –                        subdural hematoma                B-cell acute
                                                                                                                                     lymphoblastic
                                                                                                                                     leukemia, sepsis,
                                                                                                                                     acute kidney injury,
                                                                                                                                     cardiac instability
C-43a 6mo            6mo        M       41.5 h   N       N     Y           –                        global remote HIE                Denys-Drash Syndrome,
                                                                                                                                     chronic kidney disease,
                                                                                                                                     Pseudomonas abscess,
                                                                                                                                     multiple cardiac arrests
C-44a 6 years        6 years    F       13 h     N       N     Y           diffuse intrinsic        –                                –
      6mo            6mo                                                   pontine glioma
C-45a 3 days     40GW           F       40.5 h   N       N     Y           –                        –                                profound hypoxemic
      (40 1/7GW)                                                                                                                     respiratory failure,
                                                                                                                                     lung developmental
                                                                                                                                     arrest
C-46a 3 weeks        38GW       M       19 h     N       N     Y           –                        acute HIE                        congenital heart
      (35GW)                                                                                                                         disease, kidney
                                                                                                                                     hemorrhage
C-47a 16 days        16 days    M       10 h     N       N     Y           –                        HIE, diffuse WM gliosis,         complex congenital
                                                                                                    periventricular leukomalacia,    heart disease, status
                                                                                                    subarachnoid hemorrhage          post-surgical repair
C-48a 7 weeks        7 weeks    M       50 h     N       N     Y           –                        –                                necrotizing enterocolitis
C-49a 35GW           35GW       M       63 h     N       Y     N           –                        –                                congenital pulmonary
                                                                                                                                     dysplasia, interstitial
                                                                                                                                     chromosomal deletion
                                                                                                                                     ch17
C-50a 6 days         6 days     M       69 h     N       Y     N           –                        subicular necrosis, acute HIE    22q11.2 chromosomal
                                                                                                                                     deletion, DiGeorge
                                                                                                                                     syndrome
a
    based on microscopic evaluation of archived hippocampal sections
b
    step sections as described in text

Table 3 Summary of study parameters. Summary table of variables used in this retrospective study to compare between the control
(no seizure history) and seizure groups. Variables shown are corrected age of death, post-mortem interval (PMI), gender and seizure
interval (from seizure onset until death). Comparison demonstrated broad overlap especially in the range of age of death and PMI
between control and seizure sets
Group        Number of cases    Range of corrected age of death       Range of PMI        Gender (% of total)                       Range of seizure interval
Control      126                -21 to + 1060 weeks                   2 to 336 h          Male: 69 (54.76%); Female: 57 (45.24%)    –
Seizure      21                 -7 to + 990.7 weeks                   2 to 216 h          Male: 11 (52.38%); Female: 10 (47.62%)    < 24 h to 17 years
Roy et al. Acta Neuropathologica Communications   (2020) 8:54                                                Page 12 of 20

and seizure groups (Supplementary Fig. 2b, Additional           Calbindin is noted to be prominent in outer granule
File 1). Comparison of maximum GC layer thickness               cells and absent or sparse in the inner layer/half of the
in compact, DA and TT forms showed that both dis-               GC layer; however no overt cell loss were observed in
aggregated and “tram-track” GC layer thicknesses                most of these brains [1]. Similarly in our study, Calbin-
were wider than the “compact” thickness for both                din and CTIP2 expression was stronger in the outer
control and seizure brains, across ages of the cadav-           layer of the compact as well as “tram-track” control and
eric samples (Supplementary Fig. 2c, c', Additional             epileptic DG, compared to the inner GC layer (Fig. 3d,e,
File 1). While other groups showed no correlation               g,h,o,q). On the other hand, CTIP2 and Calbindin were
with the age of death, the “tram-track”-ed seizure              expressed in the entire “disaggregated” GC layer, in both
cases (Seizure TT) demonstrated a slightly positive             controls and seizure cases (Fig. 3f,i,p,r). BLBP was
correlation of GC layer thickness with increasing age           expressed in the hilus and the molecular layer of the
beyond 60 weeks (R2 = 0.4517, p = 0.0167; Supplemen-            dentate in both control and seizure-affected brains
tary Fig. 2c, Additional File 1). Table 3 summarizes            (Fig. 3j-l, s,t), as expected [38, 53].
the overlapping range of clinical parameters (age of              To determine whether the inner layer of tram-track
death, PMI, gender proportion) between control and              DG corresponds to the sub-granular zone harboring
seizure groups used in this study.                              progenitors and immature neurons, we examined the
  Further, we segregated the patient history into differ-       distributions of putative neural progenitor markers
ent diagnostic categories and analyzed whether putative         (SOX2, PAX6, TBR2) in control and seizure-affected
GCD occurrence is dependent on any particular clinical          hippocampi (Supplementary Fig. 3a-o, Additional File 1)
diagnoses (Supplementary Fig. 2d, Additional File 1).           [12, 61]. No overt differences were observed in the ex-
Two-way ANOVA revealed no statistically significant             pression of these markers within the dispersed (DA or
correlation between the different diagnostic subgroups          TT) dentate gyri of control or seizure hippocampi. Our
of patients and the presence of GCD in either control or        data are thus consistent with the study that identified
seizure cases. We observed higher incidence of diagnoses        disassociation of proliferation with GCD in the brains of
related to the central nervous system for seizure cases         TLE patients [20].
than controls; however due to relatively low sample size
of the seizure cases, this was also not considered statisti-    GCD is not dependent on increased gliosis or injury-
cally significant. Finally, we calculated the proportion of     driven mechanisms irrespective of seizure occurrence
GC layer affected by GCD per plane of section in con-           To determine whether tissue injury or macrophage-
trols and epileptic brains and found no significant differ-     related inflammation is associated with the GCD
ences between them (p = 0.801; Supplementary Fig. 2e,           phenotypes, we examined the hippocampal expres-
Additional File 1). Hence, GCD was found to occur at a          sion of injury markers GFAP and CD163 in 6 seizure
similar proportion in both control and seizure-affected         patients and 10 controls (Fig. 4) [18, 19]. Enhance-
brains and this occurrence was largely independent of           ment of strongly expressing GFAP+ and CD163+
age, gender, PMI or clinical diagnoses.                         cells denotes activation of astrocytes (gliosis) and
                                                                inflammation-related M2 macrophages respectively,
Molecular expression of cells is identical in both control      both indicative of tissue injury [19, 57]. We observed
and seizure-affected dentate gyri with GCD                      increased gliosis in some of the cadaveric seizure-
To investigate molecular differences between control            affected hippocampi, independent of GCD (Fig. 4b,f,
and seizure-affected brains, we performed immunohisto-          h), although the DG in every epilepsy case did not
chemistry and immunofluorescence on the cadaveric               have increased GFAP+ astrocytes (Fig. 4d). Enhanced
hippocampal sections. PROX1, marking cells in the adult         GFAP expression or gliosis was generally not ob-
GC layer and sub-granular zone [34], was expressed              served in the control sections, irrespective of pres-
similarly in both control and seizure-affected DG               ence of GCD (Fig. 4j,l,n,p); among the 10 controls
(Fig. 3a-c,m,n). CTIP2 is typically expressed in the hip-       evaluated immunohistochemically, we encountered
pocampal CA1 and post-mitotic dentate granule cells             only 2 control brains that exhibited mild gliosis (as
[47], predominantly in the superficial GC layer; its ex-        represented in Fig. 4r). We also did not observe any
pression in human DG gets attenuated gradually after            significant differences in the number of CD163+ cells
mid-gestation [12]. In normal human DG, Calbindin im-           in the studied cadaveric control or epileptic hippo-
munostaining is observed in hilus, molecular and GC             campi (Fig. 4c,e,g,i,k,m,o,q,s). Further, we studied the
layers, with strongest expression in the early-born post-       expression of CD68 and IBA1, generic markers for
mitotic neurons, located in the outer part GC layer distal      macrophages and microglia respectively, which con-
to the hilar region [2]. In human brains affected by dif-       gregate in response to tissue injury and cellular acti-
ferent types of epilepsy and/or hippocampal sclerosis,          vation [28, 57]. Similar to CD163, CD68+ cells were
Roy et al. Acta Neuropathologica Communications         (2020) 8:54                                                                   Page 13 of 20

 Fig. 3 Analysis of cell types in cadaveric control and seizure-affected dentate gyri demonstrating GCD. (a-t) Immunohistochemistry studies were
 performed on coronal paraffin sections of control and seizure-affected cadaveric hippocampi using GC markers, namely PROX1, CTIP2, Calbindin,
 BLBP. Representative images of compact, tram-track (TT) and disaggregated (DA) DG from both control and seizure cases are demonstrated. No
 difference was observed between control and seizure brains with respect to molecular expression of PROX1, CTIP2, Calbindin and BLBP across
 groups. PROX1 was expressed in both inner and outer GC layers of the tram-track DG (a-c,m,n). CTIP2 and Calbindin expression is more
 prominent in the outer layer, compared to the respective inner layers, as seen in compact and tram-track DG (d,e,g,h,o,p); but was expressed in
 the entire DA zone both in control and seizure cases (f,i,p,r). BLBP marked the inner granular layer and the hilar region more densely, as
 expected (j-l,s,t). BLBP staining in SZ-1 showed some non-specific background due to presumed cell autolysis (s). TT, tram-track; arrowhead, outer
 granular zone distal to hilus; open arrowhead, inner granular zone proximal to hilus; bv, blood vessel. Scalebars: 50 μm (a-t)

minimal and expressed non-differentially between                            Extent of GCD changes across antero-posterior levels of
control and epileptic brains (Supplementary Fig. 4a-                        human hippocampus
e, k-o; Additional File 1). We did encounter a few                          While analyzing multiple sections from the cadaveric
IBA+ activated microglia, identified by rounded,                            hippocampal paraffin blocks, we observed that GCD
bushy cellular morphology; but there was no correl-                         was present inconsistently and to variable extents in
ation between their presence and GCD or seizure                             different sectioning planes of both control and
occurrence (Supplementary Fig. 4f-j, p-t; Additional                        seizure-affected hippocampi (Supplementary Fig. 5a-
File 1). Thus, our results indicate that occurrence of                      d", Additional File 1). This suggested that the putative
dispersed GC layer in both controls and seizure                             seizure-related nature of “disaggregated” and/or
cases is not directly associated with either injury or                      “tram-track” GC layer in the literature might merely
inflammation, although gliosis appeared to be more                          be a consequence of sampling bias. As mentioned in
common in epileptic hippocampi.                                             the Methods, our designation of controls and seizure
Roy et al. Acta Neuropathologica Communications           (2020) 8:54                                                                     Page 14 of 20

 Fig. 4 GCD occurrence does not correlate with increased hypoxia/ischemia or gliosis in both control and seizure cases. (a) Schematic of coronal
 human hippocampus; box showed the region of interest represented in (b-o). (b-s) Representative images of control and seizure hippocampal
 samples, with compact (C), tram-track (TT) and disaggregated (DA) DG, studied for injury markers GFAP and CD163. Enhancement of GFAP
 expression and increase in CD163+ cells mark gliosis and M2 macrophages respectively, both indicative of tissue injury. Although there was
 observable gliosis in most epilepsy brains (asterisk; b, f, h), it did not correlate with the occurrence of GCD (d-g). SZ-8 demonstrated focal granule
 cell loss as well as gliosis (h,i). Enhanced gliosis was never observed in the studied control sections (j, l, n, p), except mildly in one case (r).
 Although a few CD163+ cells were observed in epilepsy and control sections (black arrows; c, g, i, m, s), the number of M2 macrophages were
 not significantly different between control and seizure sections (c, e, g, i, k, m, o, q, s). Arrowhead, outer granular zone distal to hilus; open
 arrowhead, inner granular zone proximal to hilus. Scalebars: 50 μm (b-s)

cases having or not having GCD was largely based on                           prominent TT, then a combination of TT and DA
archived cadaveric histological slides of the hippocam-                       forms and back to compact forms. Although no for-
pus. To verify the possibility of sampling bias, we cor-                      mal morphometric analysis was performed, no correl-
onally sectioned one control hippocampus (C-20) at                            ation was suggested between anterior-posterior
different levels across the antero-posterior axis, each                       location or DG contour and any specific pattern of
section a maximum of ~ 5 mm apart from the next.                              GCD. Instead, GCD appeared to be a sporadic and
Contours of the hippocampus, including DG, nor-                               somewhat randomly distributed variation in DG
mally change along the antero-posterior axis (Fig. 5a-                        histology.
d). At different points along the same axis we also                             Collectively, the data suggest that GCD is a more com-
observed each of the morphological subtypes of the                            monly occurring phenomenon than previously appreci-
GC layer (Fig. 5e-h). The morphology of GC layer                              ated, and that over-representation of seizure patients in
varied from overlapping compact and DA forms to                               the hippocampal studies may relate to a more thorough
Roy et al. Acta Neuropathologica Communications         (2020) 8:54                                                                   Page 15 of 20

 Fig. 5 GCD is not consistent across sectioning planes. (a-d) Schematics of the human hippocampus, modified from the Allen Human Brain Atlas,
 at different levels along the antero-posterior (A-P) axis. CA marks subdivisions of cornus ammonis (CA1–4); DG marks the dentate gyrus. The
 hippocampal morphology changes along the A-P axis. (e-h) Representative images of H&E-stained coronal hippocampal sections of C-20,
 specifically depicting the GC layer. Sectioning plane of each section roughly corresponds to that of the adjacent schematic. The control GC layer
 demonstrated the entire spectrum of GCD categories: compact (C), disaggregated (DA) and tram-track (TT), often showing co-existence and
 repetition along the A-P axis. Arrowhead, outer granular zone distal to hilus; open arrowhead, inner granular zone proximal to hilus; bv, blood
 vessel. Scalebars: 100 μm (e-h)

sampling in these cohorts. Most importantly, GCD is                         controls without seizure history, we identified certain
definitely not an exclusive or characteristic feature of                    histopathological characteristics, known to be unique
brains affected by epilepsy.                                                to epileptic brains, in both groups. We found no sig-
                                                                            nificant differences in neuronal morphology, molecu-
Discussion                                                                  lar expression in different cell types or extent of cell
In this retrospective study of 147 cadaveric hippo-                         loss between control and seizure-affected hippocampi.
campi from pediatric patients with seizures and                             Our study challenges the existing dogma in
Roy et al. Acta Neuropathologica Communications   (2020) 8:54                                                   Page 16 of 20

neuropathology that GCD is a specific feature of                Not surprisingly, some variation of the Blumcke et al.
chronic epilepsy, such as TLE.                                  (2009) definition has been used in many published stud-
                                                                ies of GCD and its putative specific association with epi-
Defining granule cell dispersion (GCD)                          lepsy; however, most of these either lacked or included
The GC layer is a prominent neuronal layer typically            only a few non-seizure controls for comparison (Supple-
composed of a densely packed C-shaped band of cells             mentary Table 2, Additional File 1). Further, we noted
in a normal hippocampus. A granule cell consists of             that alternative methods of GCD assessment exist. Since
clusters of apical dendrites, extending through the             dispersed GC layer is generally thicker than “normal”,
dentate molecular layer, and basal dendrites, which             some studies assessed GCD based on a morphometric
extend into the hilus and molecular layer in human              method of averaging measurements of GC layer thick-
hippocampus [4, 51]. Granule cell axons (or mossy fi-           ness across “straight” parts of DG and then re-averaging
bers) project into the hilus to synapse with hilar in-          values obtained from several sections per hippocampus
terneurons, which in turn continue to synapse onto              [24, 37, 52]. In these studies, GCD was defined as an
pyramidal neurons in area CA3, thus establishing part           average DG thickness whose value measured greater
of the hippocampal circuitry. The structure and syn-            than a range of average thicknesses obtained from non-
aptic connectivity of granule cells are vital for brain         seizure controls. As illustrated in Supplementary Fig. 6
functions, especially learning and memory consolida-            (in Additional File 1), this approach, though quantitative,
tion. Ontologically, granule cells localized proximal to        is likely to exclude focal dispersion, which is specifically
the outer molecular layer are born earlier than the             associated with epilepsy in many publications. Although
ones found at the inner side, adjacent to the hilus [7,         the morphometric approach may seem less subjective
45, 50]. Pathologically, this cell layer is found to be         than our study design, determination of what constitutes
susceptible to hippocampal insults, injury, hypoxia,            a “straight” segment of the DG is also highly subjective
brain malformations and epilepsy [15, 23, 29]. These            and may bias against inclusion of focal GCD in these
conditions often lead to hippocampal sclerosis charac-          analyses.
terized by neuronal cell loss and reactive gliosis,
microglial infiltration and, according to prior studies,        GCD is not exclusively present in seizure-affected brains
GCD [10, 54].                                                   Although many reports have accepted the correlative
  GCD is a histological phenotype reported in the af-           dogma of presence of GCD with seizure history, contra-
fected dentate gyri of patients suffering from chronic          dictions exist in the field. One study suggests that GCD
epilepsy [3, 5, 10, 15, 30, 55, 56]. GCD has been de-           is more correlated with learning and memory changes
scribed in ~ 40% of the hippocampi of TLE patients [9,          than to seizures, hippocampal sclerosis or neuronal loss
56, 59]. Similar to the human epilepsy-affected brains,         [8]. GCD has also been observed in many children, with
animal models of epilepsy demonstrated different kinds          no history of seizures, who died suddenly and unexpect-
of dispersed GC layer, thought to be replicative of hu-         edly [26, 31, 32]. Although the hippocampal findings in
man patient pathophysiology [40, 43]. Variable overlap-         the latter research were interpreted as potentially signifi-
ping patterns of GCD have been described. These                 cant malformations, the possibility of normal variation
include focal dispersed clusters of granule cells ectopi-       was not excluded. Another retrospective study of 68
cally present in either hilus or molecular DG layer, seg-       SUDEP (sudden unexpected death in epilepsy) cases
mental broadening and duplication or “tram-tracking” of         showed no evidence of significant differences in hippo-
the GC layer [8, 21, 30]. Some reports categorized bila-        campal position or shape or GC abnormalities compared
mination separately from GCD [56]. In our study, both           to 53 age-matched non-epilepsy controls, although nei-
focal broadening and bilamination of GC layer were con-         ther DA nor TT were specifically evaluated [52]. Simi-
sidered as subtypes of GCD.                                     larly, a recent study concerning sudden unexplained
  Different approaches also exist with regard to the as-        death in childhood (SUDC) cases also could not clearly
sessment of what should be considered as “GCD”. In our          relate hippocampal abnormalities to either cause or ef-
study, we have adapted and modified the GCD classifica-         fect of seizures [39]. We are aware of only one report
tion as proposed by Blumcke et al. [8], where the pres-         mentioning the existence of GCD in human patients
ence of different grades of GCD was subjectively                with no history of epilepsy or seizures [25]. This study
assessed, primarily based on differential GC density in         reported bilateral GCD in 3 post-mortem pediatric cases,
the DG (focal broadening), blurring of the boundary or          of which only 1 had epilepsy. GCD in the non-seizure
ectopic presence of clusters or bilayer of granule cells.       brain samples included both DA and TT subtypes, as de-
Definition of GCD in this manner can be easily trans-           fined in our study. We also observed GCD in the pub-
lated to routine surgical pathology practice, as it requires    lished images of developing normal human
no special stains, image analysis or laborious cell counts.     hippocampus, at GW20 and GW 23–25 [12]. However,
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