Rilevanza dell'innovazione tecnologica per la ricerca traslazionale e la terapia in oncologia - Ruggero De Maria

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Rilevanza dell'innovazione tecnologica per la ricerca traslazionale e la terapia in oncologia - Ruggero De Maria
Rilevanza dell’innovazione tecnologica per la
ricerca traslazionale e la terapia in oncologia

                    Ruggero De Maria

 Dipartimento di Ematologia Oncologia e Medicina Molecolare,
 Istituto Superiore di Sanità
Rilevanza dell'innovazione tecnologica per la ricerca traslazionale e la terapia in oncologia - Ruggero De Maria
Translational research:
      the central role of biotechnologies
  Clinicians         Bench scientists          Clinical scientists

Pathophysiology      Genomics                   Clinical trials
Diseases             Proteomics
New infections       Stem cells
                     Transgenic/knockouts
                     Structural
                     biology/Imaging

  Clinical problem                          Clinical application
Rilevanza dell'innovazione tecnologica per la ricerca traslazionale e la terapia in oncologia - Ruggero De Maria
Association of molecular markers with toxicity outcomes in a randomized
  trial of chemotherapy
                     py for advanced colorectal cancer: the FOCUS trial
Rilevanza dell'innovazione tecnologica per la ricerca traslazionale e la terapia in oncologia - Ruggero De Maria
How Could Molecular Markers Influence
        Treatment Decisions?
 Treatment       Clinical    Genomic              Impact

  “Sparing”        Yes          No             ↓ Unnecessary
                                                  Therapy

 “Selection”        No         Yes              ↑ Curability
                                           Avoid undertreatment

 “Direction”     Equipoise   Yes or no   More appropriate treatment
                                                 choices

“Confirmation”     Yes         Yes        Confirm clinical decision
                   No          No
Rilevanza dell'innovazione tecnologica per la ricerca traslazionale e la terapia in oncologia - Ruggero De Maria
Innovative screening tools: BRCA1/2 mutation screening for
     hereditary Breast and Ovarian Cancer syndrome

                                               Lifetime risk estimates of
                                               developing breast and
                                               ovarian cancer among
                                               women with  h inherited
                                                               h     d
                                               BRCA1 or BRCA2 mutations

                                                Reduction of cancer
                                                incidence with surgical
                                                and nonsurgical
                                                interventions

                                              Roukos DH. Nat Clin Pract Oncol. 2007
Rilevanza dell'innovazione tecnologica per la ricerca traslazionale e la terapia in oncologia - Ruggero De Maria
Association of molecular markers with toxicity outcomes in a randomized
  trial of chemotherapy
                     py for advanced colorectal cancer: the FOCUS trial

                                                                                                Hypothesized Impact
 Marker/Function                      Variant          At Risk GT   Drug Effected
                                                                                    Activity      Toxicity         Other
  ABCB1/cellular efflux             3435 C to T           TT          Irinotecan       ↓             ↑          ↓ clearance
                                 IVS14 + 1G to A
  DPYD/detoxification                                   Variants     Fluorouracil      ↓             ↑       ↑ active metabolite
                                      (*2A)
  ERCC2/DNA repair                 35 931 A to C
                                   35,931                 CC         Oxaliplatin       ↓             ↑         ↓ DNA repair
  GSTP1/detoxification              313 A to G            AA         Oxaliplatin       ↓             ↑        ↓ detoxification
                                                                     Fluorouracil
  MLH1/DNA repair                   -93 G to A            AA          Irinotecan       ↓             ↑         ↓ DNA repair
                                                                     Oxaliplatin
  MTHFR/folate pool, modifies
                                    667 C to T            TT         Fluorouracil      ↓             ↑                --
  FU response

  TYMS/target for FU            1494: 6 bp insertion      +/+        Fluorouracil      --            ↑          ↓ expression
  metabolite                     ER: VNTR 28 bp          2R/2R       Fluorouracil      --            ↑          ↓ expression
                                 VNTR: 6 or 7 TA
  UGT1A1/detoxification                                   7/7         Irinotecan       ↓             ↑        ↓ detoxification
                                  repeats (*28)
                                                                     Irinotecan
  XRCC1/DNA repair                 23 885 G to A
                                   23,885                 AA                           ↓             ↑         ↓ DNA repair
                                                                     Oxaliplatin

  Individuals who are homozygous for the UGT1A1*28 allele are at increased risk for
  neutropenia
         p     followingg initiation of irinotecan treatment

                                                                                            Braun MS, et al. J Clin Oncol. 2009
Rilevanza dell'innovazione tecnologica per la ricerca traslazionale e la terapia in oncologia - Ruggero De Maria
Molecular profiling for individual risk assessment :
         MammaPrint® ((70 genes
                           g       involved in cancer biology)
                                                           gy)

Van ‘t Veer et al, Nature2002
Rilevanza dell'innovazione tecnologica per la ricerca traslazionale e la terapia in oncologia - Ruggero De Maria
Rilevanza dell'innovazione tecnologica per la ricerca traslazionale e la terapia in oncologia - Ruggero De Maria
MicroRNAs are endogenous non coding single-stranded RNAs of       ~ 22nt that play important roles in
      animals and plants by targeting 3’UTR of mRNAs for cleavage or translational repression

              MiRNAs may thus represent one of the largest class of gene regulators

         They are implicated in a variety of processes, such as development, organogenesis,

              stemness and differentiation, growth control and programmed cell death
Relationship between the expression levels of 9 MicroRNAs and time from diagnosis
        to initial therapy in patients with chronic lymphocytic leukemia (CLL)

                            ((P
Present and future of targeted therapy

                                    Siena S et al,JNCI 2009
Biomarkers discovery: predictive value of
                                   EGFR‐activating mutations for anti‐EGFR therapy (lung cancer)

                                          EGFR Mutation Positive                                                           EGFR Mutation Negative
                      1.0                  Events                                                        1.0
                                           Gefitinib: 97 (73.5%)                                                           Events

                                                                                    Probability of PFS
Probabilitty of PFS

                      0.8                  Pac/carbo: 111 (86.0%)                                        0.8               Gefitinib: 88 (96.7%)
                      0.6                           HR: 0.48                                             0.6               Pac/carbo: 70 (82.4%)
                                                    (95% CI: 0.36‐0.64; P < .001)
                      0.4                                                                                0.4
                                 Paclitaxel/         Gefitinib                                                                      Paclitaxel/
                      0.2       carboplatin
                                                                                                         0.2
                                                                                                                                   carboplatin
                                                                                                               Gefitinib
                       0                                                                                   0
                            0       4     8    12   16 20            24                                        0      4     8    12   16 20              24
                                    Mos Since Randomization                                                           Mos Since Randomization

ORR, %                                                           Gefitinib                               Paclitaxel/                        P Value
                                                                                                         Carboplatin
Overall population                                                 43.0                                        32.2                          < .001
EGFR mutation positive                                             71 2
                                                                   71.2                                        47 3
                                                                                                               47.3                          < .001
                                                                                                                                                001
EGFR wild type                                                     1.1                                         23.5                               .001
                                                                                                                                     Mok TS, et al. NEJM 2009
Biomarkers discovery: predictive value of
K‐ras
K ras status for anti
                 anti‐EGFR
                      EGFR therapy (CRYSTAL trial)

   Influence of KRAS status on efficacy of cetuximab plus FOLFIRI
                                                             Normanno N et al. Nat. Rev. Clin. Oncol 2009
Translational Potential of Protein Microarrays
  for Routine Use in Clinical Research Specimens

Tumor biopsy             Microdissection
                                           Protein Microarray

                                            Data Analysis

        Patient/Tumor‐Specific
        Signaling Network Profile

        Tailored targeted therapy
Patient A                           Patient B

            Patient A

                        Patient B
Pathology Report of the Future:
           Individualized Protein Pathway Activation Maps

Glioblastoma Mulitforme Patient 1   Glioblastoma Mulitforme Patient 2
Symmetric          Asymmetric
 division            division

        Tumorigenic             Non tumorigenic transient         Non tumorigenic
      cancer stem cells          amplifying progenitors           differentiated cell

            Old view                                   New view

                                                    x                              Non
                                                                                 Metastatic

                                                      x
                                               xx x
                                                                                 Potentially
                                                                                 metastatic

                                              xx x                                 Non

                                             xx x x                              Metastatic

                                                x x
                                              xx x
Symmetric          Asymmetric
 division            division

        Tumorigenic             Non tumorigenic transient         Non tumorigenic
      cancer stem cells          amplifying progenitors           differentiated cell

            Old view                                   New view

                                                    x                              Non
                                                                                 Metastatic

                                                      x
                                               xx x
                                                                                 Potentially
                                                                                 metastatic

                                              xx x                                 Non

                                             xx x x                              Metastatic

                                                x x
                                              xx x
Symmetric          Asymmetric
 division            division

        Tumorigenic             Non tumorigenic transient         Non tumorigenic
      cancer stem cells          amplifying progenitors           differentiated cell

            Old view                                   New view

                                                   x                               Non
                                                                                 Metastatic

                                                     x
                                               xx x
                                                                                 Potentially
                                                                                 metastatic

                                              xx x                                 Non

                                             xx x x                              Metastatic

                                              x
                                             xxx x
                                               xx
Colon cancer spheres are tumorigenic
                                                and reproduce the original tumor even
                                                after long term expansion
                                                       CDX2      beta-catenin           CK 20
               2.5
                         500 spheres
                         50 spheres
               2.0       106 adherent cells
         m3)

                                                                                                      patient
Volume (cm

               1.5

               1.0
V

               05
               0.5
                                                                                                      mouse
                0
                     0   2   4   6   8   10 12 14
                             Time ((weeks))

                                  patient           mouse     mouse after ½ year     mouse after 1 year

           H&E

                                                                    Ricci-Vitiani et al. Nature 445:111, 2007
Need for more reliable animal models:
    CSC‐derived
    CSC derived vs cell line‐derived
                        line derived xenografts

Cancer stem cells
                                    NCI 60 cell lines

                     RPPM
ISS has the largest collection of cancer stem cells
MRI
                     Diagnosis and                                                              Tumor
                    tissue banking                                                             database

                                          H&E

            Tumor
         dissociation
                                     Stem cell culture
                                      and expansion
                                                                                    Cancer stem cell
                                                                                       bankingg

      Tumor Type    Histotype        Total available     Tumor Type     Histotype                Total available
      Colorectal    Colon                     18         Glioblastoma   ‐                                 32
                    Rectum                     8         Melanoma       ‐                                  9
                    Squamous                   7         Ovary          ‐                                  3
                    Adenocarcinoma             8         Breast         Infiltrating ductal                9
      Lung          Large Cell                 5                        Infiltrating lobular               1
                    Small Cell                 2                        Anaplastic                         4
                    Carcinoid                  1         Thyroid        Papillary                          8
                    TBD                        3                        Follicular                         6
Translating the CSC concept into clinical studies

                         Banking and characterization of CSCs

Identification of druggable pathways               TTestt off pathway‐targeted
                                                                th    t    t d inhibitors
                                                                               i hibit
through high‐throughput technologies               on CSC‐derived xenografts
(i.e. RPPM): in vitro drug screening

                                                   Clinical studies:
                                                   ‐Retrospective
                                                    R t      ti (biomarkers
                                                                  (bi  k validation)
                                                                            lid ti )
                                                   ‐Prospective (adaptive trials)
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