Publications de l'équipe - UMR3244 - Dynamique de l'information génétique - Centre de Recherche Institut Curie

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Publications de l’équipe
                                      UMR3244 – Dynamique de l’information génétique

Année de publication : 2019

Katrin Möller, Sara Sigurbjornsdottir, Asgeir O Arnthorsson, Vivian Pogenberg, Ramile Dilshat,
Valerie Fock, Solveig H Brynjolfsdottir, Christian Bindesboll, Margret Bessadottir, Helga M
Ogmundsdottir, Anne Simonsen, Lionel Larue, Matthias Wilmanns, Vesteinn Thorsson, Eirikur
Steingrimsson, Margret H Ogmundsdottir (2019 Feb 2)
MITF has a central role in regulating starvation-induced autophagy in
melanoma.
Scientific reports : 1055 : DOI : 10.1038/s41598-018-37522-6

 Résumé

 The MITF transcription factor is a master regulator of melanocyte development and a critical
 factor in melanomagenesis. The related transcription factors TFEB and TFE3 regulate
 lysosomal activity and autophagy processes known to be important in melanoma. Here we
 show that MITF binds the CLEAR-box element in the promoters of lysosomal and
 autophagosomal genes in melanocytes and melanoma cells. The crystal structure of MITF
 bound to the CLEAR-box reveals how the palindromic nature of this motif induces symmetric
 MITF homodimer binding. In metastatic melanoma tumors and cell lines, MITF positively
 correlates with the expression of lysosomal and autophagosomal genes, which, interestingly,
 are different from the lysosomal and autophagosomal genes correlated with TFEB and TFE3.
 Depletion of MITF in melanoma cells and melanocytes attenuates the response to starvation-
 induced autophagy, whereas the overexpression of MITF in melanoma cells increases the
 number of autophagosomes but is not sufficient to induce autophagic flux. Our results
 suggest that MITF and the related factors TFEB and TFE3 have separate roles in regulating a
 starvation-induced autophagy response in melanoma. Understanding the normal and
 pathophysiological roles of MITF and related transcription factors may provide important
 clinical insights into melanoma therapy.

Konrad Gronke, Pedro P Hernández, Jakob Zimmermann, Christoph S N Klose, Michael Kofoed-
Branzk, Fabian Guendel, Mario Witkowski, Caroline Tizian, Lukas Amann, Fabian Schumacher,
Hansruedi Glatt, Antigoni Triantafyllopoulou, Andreas Diefenbach (2019 Feb 1)
Interleukin-22 protects intestinal stem cells against genotoxic stress.
Nature : 249-253 : DOI : 10.1038/s41586-019-0899-7

 Résumé

 Environmental genotoxic factors pose a challenge to the genomic integrity of epithelial cells
 at barrier surfaces that separate host organisms from the environment. They can induce
 mutations that, if they occur in epithelial stem cells, contribute to malignant transformation
 and cancer development. Genome integrity in epithelial stem cells is maintained by an
 evolutionarily conserved cellular response pathway, the DNA damage response (DDR). The
 DDR culminates in either transient cell-cycle arrest and DNA repair or elimination of
 damaged cells by apoptosis. Here we show that the cytokine interleukin-22 (IL-22), produced

                             INSTITUT CURIE, 20 rue d’Ulm, 75248 Paris Cedex 05, France | 1
Publications de l’équipe
                                     UMR3244 – Dynamique de l’information génétique

 by group 3 innate lymphoid cells (ILC3) and γδ T cells, is an important regulator of the DDR
 machinery in intestinal epithelial stem cells. Using a new mouse model that enables sporadic
 inactivation of the IL-22 receptor in colon epithelial stem cells, we demonstrate that IL-22 is
 required for effective initiation of the DDR following DNA damage. Stem cells deprived of
 IL-22 signals and exposed to carcinogens escaped DDR-controlled apoptosis, contained more
 mutations and were more likely to give rise to colon cancer. We identified metabolites of
 glucosinolates, a group of phytochemicals contained in cruciferous vegetables, to be a
 widespread source of genotoxic stress in intestinal epithelial cells. These metabolites are
 ligands of the aryl hydrocarbon receptor (AhR), and AhR-mediated signalling in ILC3 and γδ T
 cells controlled their production of IL-22. Mice fed with diets depleted of glucosinolates
 produced only very low levels of IL-22 and, consequently, the DDR in epithelial cells of mice
 on a glucosinolate-free diet was impaired. This work identifies a homeostatic network
 protecting stem cells against challenge to their genome integrity by AhR-mediated ‘sensing’
 of genotoxic compounds from the diet. AhR signalling, in turn, ensures on-demand
 production of IL-22 by innate lymphocytes directly regulating components of the DDR in
 epithelial stem cells.

Nathalie Fretellier, Agnès Granottier, Marlène Rasschaert, Anne-Laure Grindel, Fannie
Baudimont, Philippe Robert, Jean-Marc Idée, Claire Corot (2019 Feb 1)
Does Age Interfere With Gadolinium Toxicity and Presence in Brain and Bone
Tissues?: A Comparative Gadoterate Versus Gadodiamide Study in Juvenile and
Adult Rats.
Investigative radiology : 54 : 61-71 : DOI : 10.1097/RLI.0000000000000517

 Résumé

 Objectives

 The main objective of the study was to assess the effect of age on target tissue total
 gadolinium (Gd) retention after repeated administration of gadodiamide (linear) or
 gadoterate (macrocyclic) Gd-based contrast agent (GBCA) in rats. The secondary objective
 was to assess the potential developmental and long-term consequences of GBCA
 administration during neonatal and juvenile periods.

 Materials and Methods

 A total of 20 equivalent human clinical doses (cumulated dose, 12 mmol Gd/kg) of either
 gadoterate or gadodiamide were administered concurrently by the intravenous route to
 healthy adult and juvenile rats. Saline was administered to juvenile rats forming the control
 group. In juvenile rats, the doses were administered from postnatal day 12, that is, once the
 blood-brain barrier is functional as in humans after birth. The tests were conducted on 5
 juvenile rats per sex and per group and on 3 adult animals per sex and per group. T1-
 weighted magnetic resonance imaging of the cerebellum was performed at 4.7 T during both
 the treatment and treatment-free periods. Behavioral tests were performed in juvenile rats.
 Rats were euthanatized at 11 to 12 weeks (ie, approximately 3 months) after the last

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                                     UMR3244 – Dynamique de l’information génétique

 administration. Total Gd concentrations were measured in plasma, skin, bone, and brain by
 inductively coupled plasma mass spectrometry. Cerebellum samples from the juvenile rats
 were characterized by histopathological examination (including immunohistochemistry for
 glial fibrillary acidic protein or GFAP, and CD68). Lipofuscin pigments were also studied by
 fluorescence microscopy. All tests were performed blindly on randomized animals.

 Results

 Transient skin lesions were observed in juvenile rats (5/5 females and 2/4 males) and not in
 adult rats having received gadodiamide. Persisting (up to completion of the study) T1
 hyperintensity in the deep cerebellar nuclei (DCNs) was observed only in gadodiamide-
 treated rats. Quantitatively, a slightly higher progressive increase in the DCN/brain stem
 ratio was observed in adult rats compared with juvenile rats, whereas no difference was
 noted visually. In all tissues, total Gd concentrations were higher (10- to 30-fold higher) in
 the gadodiamide-treated groups than in the gadoterate groups. No age-related differences
 were observed except in bone marrow where total Gd concentrations in gadodiamide-treated
 juvenile rats were higher than those measured in adults and similar to those measured in
 cortical bone tissue. No significant treatment-related effects were observed in
 histopathological findings or in development, behavior, and biochemistry parameters.
 However, in the elevated plus maze test, a trend toward an anxiogenic effect was observed
 in the gadodiamide group compared with other groups (nonsignificant). Moreover, in the
 balance beam test, a high number of trials were excluded in the gadodiamide group because
 rats (mainly males) did not completely cross the beam, which may also reflect an anxiogenic
 effect.

 Conclusions

 No T1 hyperintensity was observed in the DCN after administration of the macrocyclic GBCA
 gadoterate regardless of age as opposed to administration of the linear GBCA gadodiamide.
 Repeated administration of gadodiamide in neonatal and juvenile rats resulted in similar
 total Gd retention in the skin, brain, and bone to that in adult rats with sex having no effect,
 whereas Gd distribution in bone marrow was influenced by age. Further studies are required
 to assess the form of the retained Gd and to investigate the potential risks associated with
 Gd retention in bone marrow in juvenile animals treated with gadodiamide. Regardless of
 age, total Gd concentration in the brain and bone was 10- to 30-fold higher after
 administration of gadodiamide compared with gadoterate.

Larissa Mourao, Guillaume Jacquemin, Mathilde Huyghe, Wojciech J Nawrocki, Naoual Menssouri,
Nicolas Servant, Silvia Fre (2019 Jan 31)
Lineage tracing of Notch1-expressing cells in intestinal tumours reveals a
distinct population of cancer stem cells.
Scientific reports : 888 : DOI : 10.1038/s41598-018-37301-3

 Résumé

                            INSTITUT CURIE, 20 rue d’Ulm, 75248 Paris Cedex 05, France | 3
Publications de l’équipe
                                      UMR3244 – Dynamique de l’information génétique

 Colon tumours are hierarchically organized and contain multipotent self-renewing cells,
 called Cancer Stem Cells (CSCs). We have previously shown that the Notch1 receptor is
 expressed in Intestinal Stem Cells (ISCs); given the critical role played by Notch signalling in
 promoting intestinal tumourigenesis, we explored Notch1 expression in tumours. Combining
 lineage tracing in two tumour models with transcriptomic analyses, we found that Notch1+
 tumour cells are undifferentiated, proliferative and capable of indefinite self-renewal and of
 generating a heterogeneous clonal progeny. Molecularly, the transcriptional signature of
 Notch1+ tumour cells highly correlates with ISCs, suggestive of their origin from normal
 crypt cells. Surprisingly, Notch1+ expression labels a subset of CSCs that shows reduced
 levels of Lgr5, a reported CSCs marker. The existence of distinct stem cell populations within
 intestinal tumours highlights the necessity of better understanding their hierarchy and
 behaviour, to identify the correct cellular targets for therapy.

Chia-Hsiang Chang, Marco Zanini, Hamasseh Shirvani, Jia-Shing Cheng, Hua Yu, Chih-Hsin Feng,
Audrey L Mercier, Shiue-Yu Hung, Antoine Forget, Chun-Hung Wang, Sara Maria Cigna, I-Ling Lu,
Wei-Yi Chen, Sophie Leboucher, Won-Jing Wang, Martial Ruat, Nathalie Spassky, Jin-Wu Tsai,
Olivier Ayrault (2019 Jan 30)
Atoh1 Controls Primary Cilia Formation to Allow for SHH-Triggered Granule
Neuron Progenitor Proliferation.
Developmental cell : 184-199.e5 : DOI : S1534-5807(18)31085-2

 Résumé

 During cerebellar development, granule neuron progenitors (GNPs) proliferate by
 transducing Sonic Hedgehog (SHH) signaling via the primary cilium. Precise regulation of
 ciliogenesis, thus, ensures proper GNP pool expansion. Here, we report that Atoh1, a
 transcription factor required for GNPs formation, controls the presence of primary cilia,
 maintaining GNPs responsiveness to SHH. Loss of primary cilia abolishes the ability of Atoh1
 to keep GNPs in a proliferative state. Mechanistically, Atoh1 promotes ciliogenesis by
 transcriptionally regulating Cep131, which facilitates centriolar satellite (CS) clustering to
 the basal body. Importantly, ectopic expression of Cep131 counteracts the effects of Atoh1
 loss in GNPs by restoring proper localization of CS and ciliogenesis. This Atoh1-CS-primary
 cilium-SHH pro-proliferative pathway is also conserved in SHH-type medulloblastoma, a
 pediatric brain tumor arising from the GNPs. Together, our data reveal how Atoh1 modulates
 the primary cilium to regulate GNPs development.

Maria Duda, Natalie J Kirkland, Nargess Khalilgharibi, Melda Tozluoglu, Alice C Yuen, Nicolas
Carpi, Anna Bove, Matthieu Piel, Guillaume Charras, Buzz Baum, Yanlan Mao (2019 Jan 30)
Polarization of Myosin II Refines Tissue Material Properties to Buffer Mechanical
Stress.
Developmental cell : 245-260.e7 : DOI : S1534-5807(18)31088-8

 Résumé
 As tissues develop, they are subjected to a variety of mechanical forces. Some of these

                             INSTITUT CURIE, 20 rue d’Ulm, 75248 Paris Cedex 05, France | 4
Publications de l’équipe
                                     UMR3244 – Dynamique de l’information génétique

 forces are instrumental in the development of tissues, while others can result in tissue
 damage. Despite our extensive understanding of force-guided morphogenesis, we have only
 a limited understanding of how tissues prevent further morphogenesis once the shape is
 determined after development. Here, through the development of a tissue-stretching device,
 we uncover a mechanosensitive pathway that regulates tissue responses to mechanical
 stress through the polarization of actomyosin across the tissue. We show that stretch
 induces the formation of linear multicellular actomyosin cables, which depend on
 Diaphanous for their nucleation. These stiffen the epithelium, limiting further changes in
 shape, and prevent fractures from propagating across the tissue. Overall, this mechanism of
 force-induced changes in tissue mechanical properties provides a general model of force
 buffering that serves to preserve the shape of tissues under conditions of mechanical stress.

Delphine Naud-Martin, Corinne Landras-Guetta, Daniela Verga, Deepanjan Ghosh, Sylvain
Achelle, Florence Mahuteau-Betzer, Sophie Bombard, Marie-Paule Teulade-Fichou (2019 Jan 26)
Selectivity of Terpyridine Platinum Anticancer Drugs for G-quadruplex DNA.
Molecules (Basel, Switzerland) : 24 : 404 : DOI : 10.3390/molecules24030404

 Résumé

 Guanine-rich DNA can form four-stranded structures called G-quadruplexes (G4s) that can
 regulate many biological processes. Metal complexes have shown high affinity and
 selectivity toward the quadruplex structure. Here, we report the comparison of a panel of
 platinum (II) complexes for quadruplex DNA selective recognition by exploring the aromatic
 core around terpyridine derivatives. Their affinity and selectivity towards G4 structures of
 various topologies have been evaluated by FRET-melting (Fluorescence Resonance Energy
 Transfert-melting) and Fluorescent Intercalator Displacement (FID) assays, the latter
 performed by using three different fluorescent probes (Thiazole Orange (TO), TO-PRO-3, and
 PhenDV). Their ability to bind covalently to the c-myc G4 structure in vitro and their
 cytotoxicity potential in two ovarian cancerous cell lines were established. Our results show
 that the aromatic surface of the metallic ligands governs, in vitro, their affinity, their
 selectivity for the G4 over the duplex structures, and platination efficiency. However, the
 structural modifications do not allow significant discrimination among the different G4
 topologies. Moreover, all compounds were tested on ovarian cancer cell lines and normal cell
 lines and were all able to overcome cisplatin resistance highlighting their interest as new
 anticancer drugs.

Pietro Mancuso, Rossella Tricarico, Vikram Bhattacharjee, Laura Cosentino, Yuwaraj Kadariya,
Jaroslav Jelinek, Emmanuelle Nicolas, Margret Einarson, Neil Beeharry, Karthik Devarajan,
Richard A Katz, Dorjbal G Dorjsuren, Hongmao Sun, Anton Simeonov, Antonio Giordano, Joseph R
Testa, Guillaume Davidson, Irwin Davidson, Lionel Larue, Robert W Sobol, Timothy J Yen, Alfonso
Bellacosa (2019 Jan 25)
Thymine DNA glycosylase as a novel target for melanoma.
Oncogene : DOI : 10.1038/s41388-018-0640-2

                            INSTITUT CURIE, 20 rue d’Ulm, 75248 Paris Cedex 05, France | 5
Publications de l’équipe
                                     UMR3244 – Dynamique de l’information génétique

 Résumé

 Melanoma is an aggressive neoplasm with increasing incidence that is classified by the NCI
 as a recalcitrant cancer, i.e., a cancer with poor prognosis, lacking progress in diagnosis and
 treatment. In addition to conventional therapy, melanoma treatment is currently based on
 targeting the BRAF/MEK/ERK signaling pathway and immune checkpoints. As drug resistance
 remains a major obstacle to treatment success, advanced therapeutic approaches based on
 novel targets are still urgently needed. We reasoned that the base excision repair enzyme
 thymine DNA glycosylase (TDG) could be such a target for its dual role in safeguarding the
 genome and the epigenome, by performing the last of the multiple steps in DNA
 demethylation. Here we show that TDG knockdown in melanoma cell lines causes cell cycle
 arrest, senescence, and death by mitotic alterations; alters the transcriptome and
 methylome; and impairs xenograft tumor formation. Importantly, untransformed
 melanocytes are minimally affected by TDG knockdown, and adult mice with conditional
 knockout of Tdg are viable. Candidate TDG inhibitors, identified through a high-throughput
 fluorescence-based screen, reduced viability and clonogenic capacity of melanoma cell lines
 and increased cellular levels of 5-carboxylcytosine, the last intermediate in DNA
 demethylation, indicating successful on-target activity. These findings suggest that TDG may
 provide critical functions specific to cancer cells that make it a highly suitable anti-melanoma
 drug target. By potentially disrupting both DNA repair and the epigenetic state, targeting
 TDG may represent a completely new approach to melanoma therapy.

CAMPAGNE Antoine, LEE Ming-Kang, ZIELINSKI Dina, MICHAUD Audrey, LE CORRE Stéphanie,
DINGLI Florent, CHEN Hong, SHAHIDIAN Lara Z, SERVANT Nicolas, LOEW Damarys, PASMANT
Eric, PISTEL-VINAY Sophie, WASSEF Michel, MARGUERON Raphaël (2019 Jan 21)
BAP1 complex promotes transcription by opposing PRC1-mediated H2A
ubiquitylation
Nature Communications : DOI : 10.1038/s41467-018-08255-x

 Résumé

 In Drosophila, a complex consisting of Calypso and ASX catalyzes H2A deubiquitination and
 has been reported to act as part of the Polycomb machinery in transcriptional silencing. The
 mammalian homologs of these proteins (BAP1 and ASXL1/2/3, respectively), are frequently
 mutated in various cancer types, yet their precise functions remain unclear. Using an
 integrative approach based on isogenic cell lines generated with CRISPR/Cas9, we uncover
 an unanticipated role for BAP1 in gene activation. This function requires the assembly of an
 enzymatically active BAP1-associated core complex (BAP1.com) containing one of the
 redundant ASXL proteins. We investigate the mechanism underlying BAP1.com-mediated
 transcriptional regulation and show that it does not participate in Polycomb-mediated
 silencing. Instead, our results establish that the function of BAP1.com is to safeguard
 transcriptionally active genes against silencing by the Polycomb Repressive Complex 1.

M Schmidt-Cernohorska, I Zhernov, E Steib, M Le Guennec, R Achek, S Borgers, D Demurtas, L

                            INSTITUT CURIE, 20 rue d’Ulm, 75248 Paris Cedex 05, France | 6
Publications de l’équipe
                                      UMR3244 – Dynamique de l’information génétique

Mouawad, Z Lansky, V Hamel, P Guichard (2019 Jan 19)
Flagellar microtubule doublet assembly in vitro reveals a regulatory role of
tubulin C-terminal tails.
Science (New York, N.Y.) : 363 : 285-288 : DOI : 10.1126/science.aav2567

 Résumé

 Microtubule doublets (MTDs), consisting of an incomplete B-microtubule at the surface of a
 complete A-microtubule, provide a structural scaffold mediating intraflagellar transport and
 ciliary beating. Despite the fundamental role of MTDs, the molecular mechanism governing
 their formation is unknown. We used a cell-free assay to demonstrate a crucial inhibitory role
 of the carboxyl-terminal (C-terminal) tail of tubulin in MTD assembly. Removal of the C-
 terminal tail of an assembled A-microtubule allowed for the nucleation of a B-microtubule on
 its surface. C-terminal tails of only one A-microtubule protofilament inhibited this side-to-
 surface tubulin interaction, which would be overcome in vivo with binding protein partners.
 The dynamics of B-microtubule nucleation and its distinctive isotropic elongation was
 elucidated by using live imaging. Thus, inherent interaction properties of tubulin provide a
 structural basis driving flagellar MTD assembly.

Pamela Caudana, Nicolas Gonzalo Núñez, Philippe De La Rochere, Anaïs Pinto, Jordan Denizeau,
Ruby Alonso, Leticia Laura Niborski, Olivier Lantz, Christine Sedlik, Eliane Piaggio (2019 Jan 18)
IL2/Anti-IL2 Complex Combined with CTLA-4, But Not PD-1, Blockade Rescues
Antitumor NK Cell Function by Regulatory T-cell Modulation.
Cancer immunology research : 443-457 : DOI : 10.1158/2326-6066.CIR-18-0697

 Résumé

 High-dose IL2 immunotherapy can induce long-lasting cancer regression but is toxic and
 insufficiently efficacious. Improvements are obtained with IL2/anti-IL2 complexes (IL2Cx),
 which redirect IL2 action to CD8 T and natural killer (NK) cells. Here, we evaluated the
 efficacy of combining IL2Cx with blockade of inhibitory immune pathways. In an
 autochthonous lung adenocarcinoma model, we show that the IL2Cx/anti-PD-1 combination
 increases CD8 T-cell infiltration of the lung and controls tumor growth. In the B16-OVA
 model, which is resistant to checkpoint inhibition, combination of IL2Cx with PD-1 or CTLA-4
 pathway blockade reverses that resistance. Both combinations work by reinvigorating
 exhausted intratumoral CD8 T cells and by increasing the breadth of tumor-specific T-cell
 responses. However, only the IL2Cx/anti-CTLA-4 combination is able to rescue NK cell
 antitumor function by modulating intratumoral regulatory T cells. Overall, association of
 IL2Cx with PD-1 or CTLA-4 pathway blockade acts by different cellular mechanisms, paving
 the way for the rational design of combinatorial antitumor therapies.

Viviana Barra, Glennis A Logsdon, Andrea Scelfo, Sebastian Hoffmann, Solène Hervé, Aaron
Aslanian, Yael Nechemia-Arbely, Don W Cleveland, Ben E Black, Daniele Fachinetti (2019 Jan 13)

                             INSTITUT CURIE, 20 rue d’Ulm, 75248 Paris Cedex 05, France | 7
Publications de l’équipe
                                      UMR3244 – Dynamique de l’information génétique

Phosphorylation of CENP-A on serine 7 does not control centromere function.
Nature communications : 175 : DOI : 10.1038/s41467-018-08073-1

 Résumé

 CENP-A is the histone H3 variant necessary to specify the location of all eukaryotic
 centromeres via its CENP-A targeting domain and either one of its terminal regions. In
 humans, several post-translational modifications occur on CENP-A, but their role in
 centromere function remains controversial. One of these modifications of CENP-A,
 phosphorylation on serine 7, has been proposed to control centromere assembly and
 function. Here, using gene targeting at both endogenous CENP-A alleles and gene
 replacement in human cells, we demonstrate that a CENP-A variant that cannot be
 phosphorylated at serine 7 maintains correct CENP-C recruitment, faithful chromosome
 segregation and long-term cell viability. Thus, we conclude that phosphorylation of CENP-A
 on serine 7 is dispensable to maintain correct centromere dynamics and function.

Hannah L Klein, Giedrė Bačinskaja, Jun Che, Anais Cheblal, Rajula Elango, Anastasiya Epshtein,
Devon M Fitzgerald, Belén Gómez-González, Sharik R Khan, Sandeep Kumar, Bryan A Leland, Léa
Marie, Qian Mei, Judith Miné-Hattab, Alicja Piotrowska, Erica J Polleys, Christopher D Putnam,
Elina A Radchenko, Anissia Ait Saada, Cynthia J Sakofsky, Eun Yong Shim, Mathew Stracy, Jun
Xia, Zhenxin Yan, Yi Yin, Andrés Aguilera, Juan Lucas Argueso, Catherine H Freudenreich, Susan
M Gasser, Dmitry A Gordenin, James E Haber, Grzegorz Ira, Sue Jinks-Robertson, Megan C King,
Richard D Kolodner, Andrei Kuzminov, Sarah Ae Lambert, Sang Eun Lee, Kyle M Miller, Sergei M
Mirkin, Thomas D Petes, Susan M Rosenberg, Rodney Rothstein, Lorraine S Symington, Pawel
Zawadzki, Nayun Kim, Michael Lisby, Anna Malkova (2019 Jan 7)
Guidelines for DNA recombination and repair studies: Cellular assays of DNA
repair pathways.
Microbial cell (Graz, Austria) : 1-64 : DOI : 10.15698/mic2019.01.664

 Résumé

 Understanding the plasticity of genomes has been greatly aided by assays for
 recombination, repair and mutagenesis. These assays have been developed in microbial
 systems that provide the advantages of genetic and molecular reporters that can readily be
 manipulated. Cellular assays comprise genetic, molecular, and cytological reporters. The
 assays are powerful tools but each comes with its particular advantages and limitations.
 Here the most commonly used assays are reviewed, discussed, and presented as the
 guidelines for future studies.

G Gentric, Y Kieffer, V Mieulet, O Goundiam, C Bonneau, F Nemati, I Hurbain, G Raposo, T
Popova, MH Stern, V Lallemand-Breitenbach, S Müller, T Cañeque, R Rodriguez, A Vincent-
Salomon, H de Thé, R Rossignol, F Mechta-Grigoriou (2019 Jan 5)

                             INSTITUT CURIE, 20 rue d’Ulm, 75248 Paris Cedex 05, France | 8
Publications de l’équipe
                                     UMR3244 – Dynamique de l’information génétique

PML-Regulated Mitochondrial Metabolism Enhances Chemosensitivity in Human
Ovarian Cancers
Cell Metabolism

 Résumé

 High-grade serous ovarian cancer (HGSOC) remains an unmet medical challenge. Here, we
 unravel an unanticipated metabolic heterogeneity in HGSOC. By combining proteomic,
 metabolomic, and bioergenetic analyses, we identify two molecular subgroups, low- and
 high-OXPHOS. While low-OXPHOS exhibit a glycolytic metabolism, high-OXPHOS HGSOCs rely
 on oxidative phosphorylation, supported by glutamine and fatty acid oxidation, and show
 chronic oxidative stress. We identify an important role for the PML-PGC-1α axis in the
 metabolic features of high-OXPHOS HGSOC. In high-OXPHOS tumors, chronic oxidative stress
 promotes aggregation of PML-nuclear bodies, resulting in activation of the transcriptional co-
 activator PGC-1α. Active PGC-1α increases synthesis of electron transport chain complexes,
 thereby promoting mitochondrial respiration. Importantly, high-OXPHOS HGSOCs exhibit
 increased response to conventional chemotherapies, in which increased oxidative stress,
 PML, and potentially ferroptosis play key functions. Collectively, our data establish a stress-
 mediated PML-PGC-1α-dependent mechanism that promotes OXPHOS metabolism and
 chemosensitivity in ovarian cancer.

Mathilde Mathieu, Lorena Martin-Jaular, Grégory Lavieu, Clotilde Théry (2019 Jan 4)
Specificities of secretion and uptake of exosomes and other extracellular
vesicles for cell-to-cell communication.
Nature cell biology : 9-17 : DOI : 10.1038/s41556-018-0250-9

 Résumé

 The ability of exosomes to transfer cargo from donor to acceptor cells, thereby triggering
 phenotypic changes in the latter, has generated substantial interest in the scientific
 community. However, the extent to which exosomes differ from other extracellular vesicles
 in terms of their biogenesis and functions remains ill-defined. Here, we discuss the current
 knowledge on the specificities of exosomes and other types of extracellular vesicles, and
 their roles as important agents of cell-to-cell communication.

                            INSTITUT CURIE, 20 rue d’Ulm, 75248 Paris Cedex 05, France | 9
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