LOSS OF MURF1 IN DUROC PIGS PROMOTES SKELETAL MUSCLE HYPERTROPHY
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Loss of MuRF1 in Duroc Pigs Promotes Skeletal Muscle Hypertrophy Jiaping Li China Agricultural University Yiqing Hu China Agricultural University Jiajia Li China Agricultural University Haitao Wang China Agricultural University Hanyu Wu China Agricultural University Chengcheng Zhao China Agricultural University Tan Tan China Agricultural University Li Zhang China Agricultural University Di Zhu China Agricultural University Xu Liu China Agricultural University Ning Li China Agricultural University Xiaoxiang Hu ( huxx@cau.edu.cn ) China Agricultural University Research Article Keywords: MuRF1, Duroc pig, meat production, pork quality, protein accumulation Posted Date: January 5th, 2023 DOI: https://doi.org/10.21203/rs.3.rs-2431828/v1 Page 1/22
License: This work is licensed under a Creative Commons Attribution 4.0 International License. Read Full License Page 2/22
Abstract Background Muscle mass development depends on increased protein synthesis and reduced degradation of muscle proteins. Muscle ring-finger protein-1 (MuRF1) plays a key role in controlling muscle atrophy. Its E3 ubiquitin ligase activity recognizes and degrades skeletal muscle proteins through the ubiquitin- proteasome system. The loss of Murf1 (the gene encoding MuRF1) in mice leads to the accumulation of skeletal muscle proteins and alleviation of muscle atrophy. However, the function of Murf1 in agricultural animals remains unclear. In this study, we bred F1 generation Murf1+/− and F2 generation Murf1−/− Duroc pigs from F0 Murf1−/− pigs to investigate the effect of Murf1 knockout on skeletal muscle development. Results The Murf1+/− pigs retained normal muscle growth and reproduction levels, and their lean meat percentage increased by 6% compared to that of the wild-type (WT) pigs. Furthermore, the meat color, pH, water-holding capacity, and tenderness of the Murf1+/− pigs were similar to those of the WT pigs. The drip loss rate and intramuscular fat decreased slightly in the Murf1+/− pigs. However, the cross-sectional area of the myofibers in the longissimus dorsi increased in adult Murf1+/− pigs. The skeletal muscle proteins MYBPC3 and actin, targeted by MuRF1, accumulated in the Murf1+/− and Murf1−/− pigs. Conclusions Our findings show that inhibiting muscle protein degradation in MuRF1-deficient Duroc pigs increases the size of their myofibers and percentage of lean meat without influencing their growth or pork quality. Our study demonstrates that Murf1 is a target gene for promoting skeletal muscle hypertrophy in pig breeding. Background Improving production is always an important goal in the pork industry, and identifying genes that affect muscle growth facilitates effective breeding. Previous studies have shown that the number of myofibers in mammals does not change after birth (Du et al. 2013). Skeletal muscle development is divided into embryonic, fetal, and adult periods. The number of myofibers only increases before birth: a process called hyperplasia. After birth, the number of myofibers remains constant, and muscle growth depends on an increase in the size of the myofibers: a process called hypertrophy (Du et al. 2013; Thornton 2019). The formation and number of myofibers are important to pork production at the prenatal development stage. Piglets with low birth weight have low myofiber differentiation rates owing to maternal and genetic factors; they exhibit comparatively low growth performance and lean meat percentage at slaughter Page 3/22
(Rehfeldt and Kuhn 2006). Therefore, improving skeletal muscle mass after birth is achieved by regulating the size of the myofibers. A delicate balance between protein synthesis and degradation is important for muscle production. Myofibers and, consequently, skeletal muscles grow when the synthesis of muscle protein increases or degradation decreases (Gumucio and Mendias 2013). Muscle ring-finger protein-1 (MuRF1), also known as E3 ubiquitin-protein ligase, is a classical muscle atrophy factor that plays an important role in protein degradation. It was first identified in skeletal muscle in 2001 (Centner et al. 2001). Studies using a mouse model of skeletal muscle atrophy have revealed the function of MuRF1. In dexamethasone-induced muscle atrophy models, the deletion of Murf1 (the gene that encodes MuRF1) alleviates muscle atrophy and increases the cross-sectional area (CSA) of the myofibers and the tension output of the gastrocnemius muscle (Baehr et al. 2011). MuRF1 deficiency also relieves age-related muscle atrophy in mice. Proteasome activity, especially that of the stand-alone proteasome 20S, decreases significantly in the skeletal muscle of aging wild-type (WT) mice. In contrast, there is no decrease in 20S activity and only a slight decrease in 26S B5 activity in Murf1 knockout (KO) mice (Hwee et al. 2014). In a mouse model of protein degradation induced by amino acid deprivation, the Murf1 KO mice were less prone to muscle atrophy in both the myocardium and skeletal muscle. Muscle protein synthesis was reduced in the WT mice, while the Murf1 KO mice maintained non- physiologically high levels of skeletal muscle protein synthesis (Polge et al. 2011). MuRF1 contains the unique RING domain of E3 ubiquitin ligase and degrades skeletal muscle proteins in vivo via the ubiquitin-proteasome degradation pathway (UPS) (Bodine and Baehr 2014). In 2007, Clarke et al. discovered that myosin heavy chain protein (MYH) is a substrate of MuRF1, and MuRF1 causes skeletal muscle atrophy when dexamethasone is injected into the hind limbs of mice (Clarke et al. 2007; Gumucio and Mendias 2013). MuRF1 also plays a key role in cardiac protein degradation. Studies have shown that MuRF1 indirectly regulates the degradation of the downstream protein, cardiac myosin- binding protein C3 (cMYBPC3), via MYH interaction (Fielitz et al. 2007). α-Actin is a major skeletal muscle protein and a UPS substrate rapidly degraded during catabolic stimulation. MuRF1 interacts directly with α-actin, in vitro and in vivo, to further induce its polyubiquitination and subsequent degradation (Polge et al. 2011). Therefore, MuRF1 has a positive regulatory effect on skeletal muscle atrophy and protein degradation. However, it is unclear whether the loss of MuRF1 affects skeletal muscle growth in agricultural animals. In the present study, we used Duroc pigs as our research model to investigate the effect of MuRF1 deficiency on skeletal muscle. Duroc pigs grow rapidly, with an average daily weight gain of more than 900 g in finishing pigs. Therefore, they are used globally as the major sire line in current pork production (Chen et al. 2021; Zhang et al. 2018). Genetic modification of genes involved in muscle protein degradation in Duroc and other breeds has great potential for improving pork production. We induced MuRF1 deficiency in Duroc boars to study the effect of MuRF1 deletion on skeletal muscle and meat yield. We used clustered regularly interspaced short palindromic repeats (CRISPR)-associated protein 9 (CRISPR/Cas9) nicking system to establish Murf1 deletion in Duroc founders (Hu 2017). We bred F1 Page 4/22
generation Murf1+/− and F2 generation Murf1−/− pigs based on Murf1−/− F0 generation Duroc pigs and compared their lean meat percentages and meat quality traits with those of WT pigs. We further examined skeletal muscle protein degradation caused by the expression of MuRF1. Our findings suggest that MuRF1 plays a role in myofiber hypertrophy and skeletal muscle protein degradation in pigs. Methods Animal studies The experimental protocols were reviewed and approved by the laboratory animal welfare and animal experimental ethical council of China Agricultural University (AW01217102-3-1) and the 948 Program of the Ministry of Agriculture of China (2012-G1(4)). All animal experiments were performed according to the guide for the Care and Use of Laboratory Animals issued by the Ministry of Science and Technology in China. The experimental pigs were housed under standard conditions and had free access to water and food. Their environment was maintained at 20–26°C, 40–60% humidity, and a 9 h light/15 h dark cycle. The pigs were euthanized using ketamine before sample collection. Polymerase chain reaction (PCR) analysis We collected ear skin from each newborn piglet and stored it in 75% ethanol at 4°C. The ear skin was digested, and the DNA was extracted through the DNeasy blood and tissue kit (69504; QIAGEN, Venlo, Netherlands). A forward primer (5′-TCTTTCAGGCTTGGAGGAAA-3′) and a reverse primer (5′- GTGCGTCATGGAGAAGGAAT-3′) were used to amplify Murf1 via PCR. The PCR reaction mix included Taq™ 2X Master Mix (10 µL), forward primer (0.4 µL), reverse primer (0.4 µL), DNA (150 ng), and water. The PCR program was performed according to the manufacturer’s instructions for using TaKaRa R004A, and the PCR products were detected using agarose gel electrophoresis. The WT and Murf1−/− PCR products comprised 629 bp and 712 bp, respectively. Total RNA extraction and reverse-transcription polymerase chain reaction (RT-PCR) analysis A 100 mg sample of thawed longissimus dorsi (LD) from the pigs was placed in a 1.5 mL microcentrifuge tube, then placed in a low-temperature automatic grinding machine at 4°C for 10 min. RNA was extracted according to the manufacturer’s instructions (RC112-01; Vazyme Biotech, Nanjing, China). Complementary DNA (cDNA) was reverse-transcribed from the total RNA (500 ng) using the PrimeScript™ RT Reagent Kit with a genomic DNA eraser (RR047A; TaKaRa, Tokyo, Japan) and stored at -20°C. The cDNA was diluted five times with water, and RT-PCR was performed using the forward primer (5′-TTAGAGCAGGTGAAGGAGGC-3′) and reverse primer (5′-TGTCAATGATGTTCTCCACCA-3′) of Murf1, and the forward primer (5′-GTCGGAGTGAACGGATTTGGC-3′) and reverse primer (5′- CACCCCATTTGATGTTGGCG-3′) of GAPDH were used to amplify the transcript. Page 5/22
Total protein extraction and western blotting Thawed LD from the pigs (100 mg) was placed in a 1.5 mL microcentrifuge tube with RIPA buffer (P0013B; Beyotime Biotechnology, Haimen, China), and 100 µL of protease (P1005; Beyotime Biotechnology) was added. The mixture was placed in a low-temperature automatic grinding machine at 4°C for 10 min and then centrifuged at 13,000 × g and 4°C for 15 mins. The protein concentration was determined using a BCA kit (P0012; Beyotime Biotechnology). Next, 30 µg of the protein was added to 5X sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) protein-loading buffer (P0281S; Beyotime Biotechnology) to produce a total volume of 30 µL. SDS-PAGE analysis was performed using a gel kit (CWBIO and CW0022S). The primary and secondary antibodies were incubated in phosphate- buffered saline with 0.1% Tween 20, 5% milk, and 3% bovine serum albumin. Immunoreactivity was determined via enhanced chemiluminescence and visualized using an imaging system. We used the following primary antibodies for the western blot: monoclonal anti-MuRF1 (sc-32920; Santa Cruz Biotechnology, Santa Cruz, CA, USA), monoclonal anti-GAPDH (BE0023; EASYBIO, Beijing, China), anti-α- actin (sc-58670; Santa Cruz Biotechnology), monoclonal anti-MYBPC3 (sc-32920; Santa Cruz Biotechnology), and monoclonal anti-MYH7 (sc-53089; Santa Cruz Biotechnology). We used the following secondary antibodies for the western blot: horseradish peroxidase-labeled goat anti-mouse (A0216; Beyotime Biotechnology) and horseradish peroxidase-labeled goat anti-rabbit (A0208; Beyotime Biotechnology). Analysis of the protein levels was performed using the ImageJ 2.0 software (National Institutes of Health). Performance testing, slaughter, and sampling To determine the pig growth traits, we measured their daily food intake and weight increase during the growth fattening stage, starting at 70 days of age until their average body weight reached 100 kg (Cabling et al. 2015). The pigs were then euthanized and exsanguinated at a commercial abattoir. The head, skin, forelimbs, hindlimbs, and viscera were eliminated. The carcass, skeletal muscle, and skin were weighed, and the dressing percentage was collected and calculated. The carcass length and backfat thickness were measured. The skeletal muscle from the left half of the carcass was selected and weighed to calculate the lean meat percentage (Cabling et al. 2015; Chen et al. 2021). Meat quality trait measurement The freshly cut surface of the LD from the thoracolumbar of the left half of each carcass was examined 45 min after euthanasia. Meat color values, i.e., lightness (L*), redness (a*), and yellowness (b*), were measured three times at 1 h and 24 h using a colorimeter (NR20XE; Shenzhen 3NH Technology Co. Ltd, Shenzhen, China). The pH values of the LD on the last rib were measured three times at 1 h (pH1) and 24 h (pH24) at 4°C using a portable pH meter (pH-Star; Matthäus Co. Ltd., Pöttmes, Germany). LD samples from the 12th to 13th lumbar vertebrae were suspended from the lid of a plastic tube at 4°C for 24 h to determine the drip loss rate. Intramuscular fat was detected in the lumbar vertebrae LD samples using the petroleum ether extraction method and a Soxtec™ fat tester. The water-holding capacity of each lumbar vertebrae LD sample was measured in an oven at 0.25 MPa and 60°C and at 0.20 MPa and 65°C. LD Page 6/22
samples without fascia, aponeuroses, or fat were taken 72 h after slaughter, and the tenderness of each sample was determined five times using a shear device (Chen et al. 2021). Histological analysis The LD samples were fixed in 4% paraformaldehyde for 24 h and embedded in paraffin. The paraffin blocks were cut into 5 mm sections and stained with hematoxylin and eosin (H&E) or used for immunofluorescence (IF) staining. The LD tissue sections were blocked with goat serum for 50 min at room temperature to prepare them for IF staining. The samples were incubated with anti-MYH1 (sc- 376157; Santa Cruz Biotechnology), anti-WGA (L4895; Sigma-Aldrich, Burlington, MA, USA), anti-MYBPC3 (sc-32920; Santa Cruz Biotechnology), and anti-α-actin (sc-58670; Santa Cruz Biotechnology), and kept at 4°C overnight. The samples were then incubated with the secondary antibodies for 1 h. The IF signals were visualized using a fluorescence microscope. The mean CSA of the LD was quantified using the ImageJ 2.0 software (National Institutes of Health). Results MuRF1 protein was successfully deleted in the gene-edited pigs We obtained F0 generation Murf1 knockout pigs using the CRISPR/Cas9n system to prematurely terminate translation by inserting either an 83 bp insertion or a marker-free neomycin (Nm)-resistance gene (neo) in the first exon of Murf1 (Hu 2017). We mated F0 Murf1−/− pigs with WT Duroc pigs to produce the first batch of the F1 generation. F1 pigs were identified as heterozygous through PCR analysis which amplified a 712 bp and 629 bp product from the gene-edited Murf1 and WT pigs, respectively (Fig. 1A). The second batch of F1 generation pigs was identified as heterozygous through PCR analysis which amplified the marker-free neomycin insertion from the gene-edited Murf1 pigs and a 629 bp product from the WT allele (S1A, B). The Murf1+/− pigs were mated with each other to produce Murf1−/− F2 generation littermates (Fig. 1B). We identified the 83 bp insertion in exon 1 of the F2 Murf1- deficient pigs using Sanger sequencing (S1C). We used 7 and 8-month-old F1 and 2-month-old F2 generation pigs for subsequent experiments. To detect the expression of Murf1, the RNA was extracted from the LD and reverse-transcribed into cDNA for RT-PCR. The transcripts of Murf1 in the skeletal muscles of the Murf1−/− pigs and WT pigs were 712 bp and 629 bp, respectively (Fig. 1C). LD samples from the 7 to 8-month-old F1 and 2-month-old F2 generation pigs were collected and subjected to protein analysis using western blot. In the F1 generation pigs, the MuRF1 protein level in the Murf1+/− pigs was lower than in the WT pigs (Fig. 1D, E). In the F2 generation pigs, the MuRF1 protein was not detected in the Murf1−/− pigs, and the MuRF1 protein levels in the Murf1+/− pigs were also lower than in the WT pigs (Fig. 1F). These data indicated that the MuRF1 protein was deficient in the gene-edited pigs. Page 7/22
Meat productivity and quality are important factors in Duroc pig farming (Cabling et al. 2015; Zhang et al. 2018). We found that in the Murf1+/− pigs, the lean meat percentage increased by 6% without influencing the meat quality. After the F1 generation pigs had grown and been fattened, we examined their food intake and weight increase (Fig. 2A, B) (Cabling et al. 2015). There were no significant changes in food intake or weight increase after Murf1 deletion. Compared to WT pigs, the backfat thickness between the fifth and sixth ribs and scapula area of the Murf1+/− pigs decreased by 0.422 cm and 0.411 cm, respectively (Fig. 2D). The carcass percentage was similar between the Murf1+/− and WT pigs (F2E). Furthermore, the lean percentage increased by 6% in the Murf1+/− pigs (Fig. 2F). We also determined if the meat quality traits changed in the Murf1+/− pigs. As shown in Fig. 3, the color (as determined by the a, b, and L values), water-holding capacity, pH, and tenderness of the meat from the Murf1+/− pigs were similar to those of the meat from the WT pigs (Fig. 3A–D) (Chen et al. 2021; Zhang et al. 2018). Moreover, the drip loss rate and intramuscular fat of the Murf1+/− pigs were slightly lower than those of the WT pigs (Fig. 3E, F). These results indicated no deterioration in the quality, taste, or nutritional value of pork from the MuRF1-deficient pigs (Cabling et al. 2015; Zhang et al. 2018). The CSA of the myofibers in the LD increased in the adult Murf1 +/− pigs compared to the CSA of the myofibers in WT pigs To further explore the effect of Murf1 deficiency on muscle growth, we collected LD samples from the F1 pigs to perform H&E staining. H&E staining and CSA analysis revealed that the myofibers were larger in the Murf1+/− pigs than in the WT pigs (Fig. 4A, B, D) (Fielitz et al. 2007). CSA analysis of the F2 generation pigs via immunofluorescence staining revealed that the CSA of LD also increased in the Murf1−/− pigs (Fig. 4C, E). These findings indicated that Murf1 deficiency results in large myofibers. The protein levels of MYBPC3 and α-actin increased in the Murf1-deficient pigs We also determined whether the metabolism of the skeletal muscle was altered in the Murf1 KO pigs. The proteins that participate in MuRF1 degradation were detected through western blot. In the F1 pigs, the protein levels of α-actin, MYBPC3, and MYH7 increased in the 7- and 8-month-old Murf1+/− pigs compared to the levels in the WT pigs (Fig. 5A–D) (Clarke et al. 2007; Mearini et al. 2010; Polge et al. 2011). In the F2 pigs, the protein levels of MyBPC3 increased in the Murf1−/− and Murf1+/− pigs compared to the WT pigs (Fig. 5E, F). We also determined the structures of the myofibers in the F2 pigs through immunohistochemistry using anti-MYBPC3 and anti-α-actin antibodies. The results showed that the structures did not change in the Murf1-deficient pigs (S2). These results further demonstrated that MuRF1 deficiency in pigs leads to the accumulation of sarcomeric proteins without muscle atrophy. Discussion Page 8/22
We bred F1 and F2 generation Duroc pigs with Murf1 loss-of-function mutation by mating Murf1−/− pigs with WT pigs to produce an F0 generation. PCR analysis and Sanger sequencing confirmed that the sizes and positions of the insertion fragments in the F1 Murf1+/−and F2 Murf1−/− pigs were as stable as they were in the F0 Murf1−/− pigs. This led to the premature termination of protein translation and failure to produce intact MuRF1 (Hu 2017). However, it is unclear whether the skeletal muscle is affected by MuRF1 deficiency in pigs. In this study, we examined meat production and quality in Murf1-deficient Duroc pigs. We found that food intake and increase in body weight did not change in the Murf1-deficient pigs, indicating that MuRF1 knockout does not affect the general growth of an animal. Furthermore, we demonstrated that backfat thickness decreased by 0.4 cm and the carcass percentage remained the same in the Murf1+/− pigs compared to the WT pigs. This suggests that MuRF1 deficiency reduces backfat thickness but does not affect the growth of pigs. However, compared to the WT pigs, the lean meat percentage increased by 6% in the Murf1+/− pigs, indicating that MuRF1 deletion improves meat production. MuRF1 targets and degrades sarcomeric proteins through E3 ubiquitin ligase via the UPS (Bodine and Baehr 2014). The UPS is a classical pathway for protein catabolism. It is involved in many biological events, such as cell cycle regulation, inflammatory responses, immune responses, and the degradation of misfolded proteins (Hirner et al. 2008; Koyama et al. 2008; Nandi et al. 2006). The operation of UPS mainly depends on three types of enzymes: ubiquitin-activating enzymes (E1s), ubiquitin-conjugating enzymes (E2s), and ubiquitin-protein ligases (E3s). The process starts with the ATP-dependent activation of ubiquitin by E1s. The activated ubiquitin is then transferred to E2s. In the final step, E3s specially recognize and recruit target proteins and transfer activated ubiquitin from the E2s to the substrate, resulting in protein modification and degradation (Metzger et al. 2012; Navon and Ciechanover 2009; Passmore and Barford 2004). MuRF1 belongs to the group of RING-related E3s that act as molecular bridges connecting the E2-ubiquitin complex with the target substrate (Metzger et al. 2012). It transfers the activated ubiquitin to lysine residues in the substrate, forming K48- and K29-linked polyubiquitin chains that are recognized and degraded by the 26S proteasome or K63-linked mono-ubiquitin-modified proteins (Cohen et al. 2009; Navon and Ciechanover 2009). Therefore, as shown by previous studies, deletion or mutation of Murf1 causes skeletal muscle hypertrophy. Deficiency of MuRF1 and MuRF3 results in hypertrophy of the skeletal and cardiac muscles in mice (Fielitz et al. 2007). Patients with Murf1 nonsense homozygous or heterozygous mutations also exhibit hypertrophy in skeletal and cardiac muscle, including left ventricular dilation (Olive et al. 2015). In this study, there was a significant difference in backfat thickness and lean meat percentage between the Murf1+/− and WT pigs, indicating that the loss of MuRF1 results in a reduction in skeletal muscle degradation via the UPS. An evaluation of meat quality revealed that the a, b, and L meat color values, water-holding capacity, pH, and tenderness of the Murf1+/− pigs were similar to those of the WT pigs. The drip loss rate of the Murf1+/− pigs was slightly reduced, which demonstrated the superior water-holding capacity of their pork (Rehfeldt and Kuhn 2006). The amount of intramuscular fat in the Murf1+/− pigs was also slightly reduced, which further illustrated that the muscle mass increased in the Murf1-deficient pigs. Page 9/22
Furthermore, the CSAs of the myofibers in the LD increased significantly in the 7-month-old F1 generation Murf1+/− pigs, and there was a similar increase in the 2-month-old F2 generation Murf1−/− pigs. However, these results differed from those for mice and humans. Previous studies reported no morphological changes or muscle atrophy in the heart and skeletal muscles of Murf1−/− mice (Bodine et al. 2001). However, there has been a report of skeletal muscle hypertrophy in Murf1−/−Murf3−/− double-KO mice (Fielitz et al. 2007). In humans, hypertrophic cardiomyopathy, caused by mutated MuRF1, is a rare autosomal recessive genetic disease characterized by moderate to severe hypertrophy, ventricular arrhythmias, extensive fibrosis, and frequent left ventricular systolic dysfunction; it causes significant disruption to daily life (Salazar-Mendiguchia et al. 2020). The loss of MuRF1 in pigs causes changes in myofibers and muscle mass, indicating that MuRF1 is a key factor in the regulation of skeletal muscle growth. In the present study, we discovered that, compared to that in the WT pigs, the protein levels of MYBPC3 increased in both the F2 generation Murf1−/− pigs and the F1 generation Murf1+/− pigs. Similarly, the levels of α-actin and MYH7 increased in the F1 generation Murf1+/− pigs. However, MuRF1 deficiency had no significant effect on the structures of the myofibers. Studies on mice have revealed that, during denervation-induced and fast-induced muscle atrophy, the levels of MYBPC and MYLC2 decrease significantly and are preferentially degraded in Murf1 knock-in mice. Furthermore, those levels do not decrease in mice after the RING domain deletion of MuRF1 (Cohen et al. 2009). Other researchers have enriched and purified myofiber proteins using recombinant glutathione-S-transferase-MuRF1 and discovered that actin is polyubiquitinylated by MuRF1 (Polge et al. 2011). Actin and MYHC levels are also reduced by MuRF1 degradation in murine cancer cachexia (Cosper and Leinwand 2012). Consistent with the results in mice, in the present study, the loss of MuRF1 caused the accumulation of target proteins to promote skeletal muscle hypertrophy further. Conclusions In the present study, Murf1 KO increased the lean meat percentage without affecting the meat quality of Duroc pigs. Our study thus provides important reference information on the role of MuRF1 in agricultural animals to improve meat yield. Abbreviations MuRF1: muscle ring-finger protein-1 UPS: ubiquitin-proteasome degradation pathway MYH: myosin heavy chain protein MYBPC3: myosin-binding protein C MYH7: β-myosin heavy chain 7 Page 10/22
MYH1: myosin heavy chain 1 WGA: wheat germ agglutinin MYLC2: myosin light chain 2 CSA: cross-sectional area CRISPR/Cas9n: clustered regularly interspaced short palindromic repeats/cas9 nickase LD: longissimus dorsi Declarations Acknowledgments[A1] We thank Heng Wang for reading, revising, and commenting on an early version of the manuscript. We also thank the staff of the China Agricultural University Teaching experimental base for helping with sample collection. [A1]As per journal guidelines: Acknowledgments Acknowledgments of people, grants, funds, etc. should be placed in a separate section on the title page. The names of funding organizations should be written in full. Ethics approval and consent to participate All animal experiments and procedures were approved by the China Agricultural University laboratory animal welfare and animal experimental ethical council. Consent for publication Not applicable. Availability of data and material All data and analysis supporting this article can be obtained from the authors or corresponding author, and all data and materials are published in the article and supplementary material. Competing interests The authors declare that they have no competing interests. Funding Page 11/22
This research was supported by the National Transgenic Breeding Project of China (project grant numbers 2016ZX08009003006 and 2011ZX08006001) and the 948 Program of the Ministry of Agriculture of China (2012-G1(4)). Authors’ contributions NL and XXH proposed the ideas; JPL, YQH, XXH, NL, and YMX designed the research; JPL, YQH, JJL, HTW, HYW, TT, CCZ, XL, LZ, DZ, YS, and YMC collected samples; JPL, YQH, and JJL performed experiments; JPL analyzed the data; YQH supported; JPL drafted the manuscript. Corresponding authors Correspondence to Ning Li and Xiaoxiang Hu. References 1. Baehr LM, Furlow JD, Bodine SC (2011) Muscle sparing in muscle RING finger 1 null mice: response to synthetic glucocorticoids. J Physiol 589:4759–4776 2. Bodine SC, Latres E, Baumhueter S, Lai VK, Nunez L, Clarke BA, et al (2001) Identification of ubiquitin ligases required for skeletal muscle atrophy. Science 294:1704–1708 3. Bodine SC, Baehr LM (2014) Skeletal muscle atrophy and the E3 ubiquitin ligases MuRF1 and MAFbx/atrogin-1. Am J Physiol Endocrinol Metab 307: E469–484 4. Cabling MM, Kang HS, Lopez BM, Jang M, Kim HS, Nam KC et al (2015) Estimation of genetic associations between production and meat quality traits in Duroc pigs. Asian-Australas J Anim Sci 28:1061–1065 5. Centner T, Yano J, Kimura E, McElhinny AS, Pelin K, Witt CC et al (2001) Identification of muscle specific ring finger proteins as potential regulators of the titin kinase domain. J Mol Biol 306:717– 726 6. Chen G, Cai Y, Su Y, Wang D, Pan X, Zhi X (2021) Study of meat quality and flavour in different cuts of Duroc-Bamei binary hybrid pigs. Vet Med Sci 7:724–734 7. Clarke BA, Drujan D, Willis MS, Murphy LO, Corpina RA, Burova E et al (2007) The E3 Ligase MuRF1 degrades myosin heavy chain protein in dexamethasone-treated skeletal muscle. Cell Metab 6:376– 385 8. Cohen S, Brault JJ, Gygi SP, Glass DJ, Valenzuela DM, Gartner C, et al (2009) During muscle atrophy, thick, but not thin, filament components are degraded by MuRF1-dependent ubiquitylation. J Cell Biol 185:1083–1095 9. Cosper PF, Leinwand LA (2012) Myosin heavy chain is not selectively decreased in murine cancer cachexia. Int J Cancer 130:2722–2727 10. Du M, Huang Y, Das AK, Yang Q, Duarte MS, Dodson MV et al (2013) Meat Science and Muscle Biology Symposium: manipulating mesenchymal progenitor cell differentiation to optimize Page 12/22
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26. Thornton KJ (2019) Triennial Growth Symposium: The Nutrition of Muscle Growth: Impacts of nutrition on the proliferation and differentiation of satellite cells in livestock species. J Anim Sci 97:2258–2269 27. Zhang J, Chai J, Luo Z, He H, Chen L, Liu X et al (2018). Meat and nutritional quality comparison of purebred and crossbred pigs. Anim Sci J 89:202–210 Figures Page 14/22
Figure 1 MuRF1 was not expressed in the Murf1-edited pigs. (A) Identification of the Murf1 genotype using PCR in the genome-modified F1 generation pigs (#99101–#99105). (B) Identification of the Murf1 genotype using PCR in the genome-modified F2 generation pigs (#119101–#119106). (C) RT-PCR revealed that the transcripts of Murf1 in the skeletal muscle of the Murf1-/- and WT pigs were 712 bp and 629 bp, respectively. (D) Identification of MuRF1 expression via western blot in 7-month-old F1 pigs. (E) Page 15/22
Identification of MuRF1 expression via western blot in 8-month-old F1 pigs. (F) Identification of MuRF1 expression via western blot in 2-month-old F2 pigs. The red arrows indicate the MuRF1 protein bands. M: protein marker. (MuRF1 = muscle ring-finger protein-1; PCR = polymerase chain reaction; RT-PCR = reverse-transcription PCR; WT = wild type) Figure 2 Page 16/22
Identification of production traits in F1 generation pigs during their growth and fattening period. (A) The total food intake was measured in the WT (n = 4) and Murf1+/- (n = 7) pigs during their growth and fattening period. (B) The weight increase was calculated by comparing the beginning and end of growth and the fattening period. (C) The backfat thickness was measured from the 5th to 6th ribs and decreased by 0.422 cm in the Murf1+/- (n = 7) pigs compared to that in the WT (n = 4) pigs. (D) The backfat thickness was measured from the scapula area and decreased by 0.411 cm in the Murf1+/- (n = 7) pigs compared to that in the WT (n = 4) pigs. (E) The carcass percentage did not change in the Murf1+/- pigs (n = 7). (F) The average lean meat percentage increased by 6% in the Murf1+/- (n = 7) pigs compared with that in the WT (n = 4) pigs. All data are presented as the mean ± SD. (WT = wild type; MuRF1 = muscle ring-finger protein-1) Page 17/22
Figure 3 Evaluation of meat quality traits in F1 generation Murf1+/- pigs. (A) The color of the LD meat was similar in the Murf1+/- (n = 7) and WT (n = 4) pigs. (B-D) The water-holding capacity, pH, and tenderness did not change in the Murf1+/- pigs (n = 7). (E) The drip loss rate decreased slightly in the Murf1+/- (n = 7) pigs compared to that in the WT (n = 4) pigs. (F) The intramuscular fat decreased slightly in the Murf1+/- (n = Page 18/22
7) pigs compared to that in the WT (n = 4) pigs. All data are presented as the mean ± SD. (MuRF1 = muscle ring-finger protein-1; LD = longissimus dorsi; WT = wild type) Figure 4 Determination of the CSA in the LD. (A) HE staining of myofibers in the 7-month-old Murf1+/- (n = 3) and WT (n = 3) pigs. The scale bar represents 50 μm. (B) HE staining of myofibers in the 8-month-old Murf1+/- Page 19/22
(n = 4) and WT (n = 1) pigs. The scale bar represents 50 μm. (C) Immunofluorescence staining with anti-MYH1 antibody (red) and anti-WGA antibody (green) of the myofibers in the 2-month-old WT (n = 2), Murf1+/- (n = 1), and Murf1-/- (n = 3) pigs. The scale bar represents 70 μm. (D) CSAs of the myofibers in the 7-month-old Murf1+/- (n = 3) and WT (n = 3) pigs calculated using the ImageJ 2.0 software. The results are the means (n ≥ 20 myofibers per condition) ± SDs. The asterisk indicates a significant difference versus the control (p ≤ 0.05). (E) CSAs of the myofibers of 2-month-old WT (n = 2), Murf1+/- (n = 1), and Murf1-/- (n = 3) pigs calculated using the ImageJ 2.0 software. The results are the means (n ≥ 20 myofibers per condition) ± SDs. (CSA = cross-sectional area; LD = longissimus dorsi; H&E = hematoxylin and eosin; MuRF1 = muscle ring-finger protein-1; WT = wild type) Page 20/22
Figure 5 Expression of MYBPC3, α-actin, and MYH7 proteins. (A) A western blot of the LD samples revealed that the expression of α-actin increased in the 7-month-old Murf1+/- pigs compared to that in the 7-month-old WT pigs. (B) Analysis of the protein levels in the 7-month-old pigs using the ImageJ 2.0 software. The results are shown as the means ± SDs. The asterisk indicates a significant difference versus the control (p ≤ 0.05). (C) Western blot of the LD samples showing the expression of MYBPC3, α-actin, and MYH7 Page 21/22
proteins in the Murf1+/- and WT pigs. (D) Analysis of the protein levels in the 8-month-old pigs using the ImageJ 2.0 software. The results are shown as the means ± SDs. (E) Western blot of the LD samples showing that the expression of MYBPC3 protein increased in the 2-month-old Murf1-/- pigs compared to that in the 2-month-old WT pigs. (F) Analysis of the protein levels in the 2-month-old pigs using the ImageJ 2.0 software. The results are shown as the means ± SDs. The asterisk indicates a significant difference versus the control (p ≤ 0.05). (LD = longissimus dorsi; MuRF1 = muscle ring-finger protein-1; WT = wild type)[A1] [A1]We appreciate your patronage and wish to ensure the best outcome possible for your journal submission. Thank you again for using our services. Please let me know if you have any questions, and I would greatly appreciate receiving your feedback. Supplementary Files This is a list of supplementary files associated with this preprint. Click to download. Supplement1.pdf supplement2.tif Page 22/22
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