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LIMNOLOGY and OCEANOGRAPHY: METHODS Limnol. Oceanogr.: Methods 10, 2012, 1070–1077 © 2012, by the American Society of Limnology and Oceanography, Inc. Estimating the in situ distribution of acid volatile sulfides from sediment profile images Peter S. Wilson* and Kay Vopel School of Applied Sciences, Auckland University of Technology, Auckland 1142, New Zealand Abstract Measuring the sediment content of acid volatile sulfides (AVS), an important determinant of coastal ecosys- tem functioning, is laborious and therefore rarely considered in routine coastal monitoring. Here, we describe a new approach to estimate the in situ distribution of AVS in subtidal soft sediment. Using amperometric H2S microelectrodes and a flatbed scanner in the laboratory, we first established a strong correlation (R2 = 0.95) between the AVS content (as extracted by cold 1 mol L-1 HCl) and the color intensity of sediment collected at 12 m water depth off the eastern coast of Waiheke Island, New Zealand. We then used this correlation to esti- mate the distribution of AVS in the upper 20 cm of this sediment from sediment profile images. These images were obtained in situ with a lightweight imaging device consisting of a modified flatbed scanner housed inside a watertight acrylic tube (SPI-Scan™, Benthic Science). We made two types of estimates from the acquired images: First, we obtained a vertical AVS concentration profile by averaging the color intensities of horizontal- ly aligned pixels. Second, we created a two-dimensional distribution plot of AVS concentration by assigning individual pixel color intensities. Because our technique enables assessments of temporal and spatial variations in the AVS content of subtidal soft sediment, we suggest using it in routine coastal monitoring. Enrichment of sediment with organic matter affects ter may be oxidized with O2 as the electron acceptor (Canfield coastal regions worldwide. Primary causes include eutrophi- et al. 1993a). cation driven by anthropogenic loading of coastal waters The abundance of sulfate (SO42-) in the water column dic- with phosphorus and nitrogen (Nixon 1995; Cloern 2001; tates that the dominant pathway for organic matter degrada- Rosenberg et al. 2009) and deposition of organic matter via tion in organically enriched sediments is via sulfate reduction terrestrial runoff (Gray et al. 2002) and aquaculture (Holmer (Thode-Andersen and Jørgensen 1989; Bagarinao 1992), which and Kristensen 1994). The oxidation of the sediment organic leads to the production of H2S. The overall rate of sedimentary matter provides energy to microorganisms aided by an oxi- sulfate reduction responds to the rate of organic particle dep- dizing agent (electron acceptor), the most energetically favor- osition, that is, the supply of sulfide to coastal sediment able being oxygen (Jørgensen and Kasten 2006). Because of increases with its organic carbon supply (Oenema 1990; Corn- transport limitations (diffusion in cohesive sediment) and well and Sampou 1995; Brüchert 1998; Sorokin and Zakuskina low saturation concentration of oxygen in seawater, oxygen 2012). Approximately 80% (Canfield et al. 1993b) to 90% is typically depleted within a few millimeters from the surface (Hansen et al. 1978; Jørgensen 1982) of the sulfide is re-oxi- of organically enriched sediment. Below this thin oxic zone, dized, mostly through microbial activity. The remaining sul- anaerobic bacteria use alternative electron acceptors to fide reacts to form more thermodynamically stable forms such decompose organic matter (Bagarinao 1992). In Danish as the minerals mackinawite (FeS), greigite (Fe3S4), and pyrite coastal sediments, for example, less than 20% of organic mat- (FeS2), which are responsible for the black color of coastal sed- iments (Berner 1964; Goldhaber and Kaplan 1980; Jørgensen 1982). Most of these sulfides convert back to H2S when treated *Corresponding author: E-mail: peter.wilson@aut.ac.nz with acid and are known as acid volatile sulfides (AVS). Acknowledgments The AVS concept was proposed by Berner in 1964. The The Faculty of Health and Environmental Sciences of Auckland author defined AVS as the sedimentary sulfur that is extracted University of Technology funded the research, and the Earth and Oceanic Sciences Research Institute provided field support. We thank by 1 mol L-1 HCl, including porewater sulfides and metastable two anonymous reviewers for their constructive critiques and com- iron sulfide minerals such as mackinawite and greigite (Berner ments. 1964). A variety of methods for extracting AVS have been DOI 10.4319/lom.2012.10.1070 adapted since the inception of the AVS concept, in particular, 1070
Wilson and Vopel Estimating in situ AVS from SPI images a range of acids, acid concentrations, and temperatures have tubes were transported in a refrigerated box to the laboratory. been used. Rickard and Morse (2005) raised concerns about In the laboratory, we removed the upper lids and immersed the uncertainty over the proportions of sulfur species the tubes gently in a plastic container (1444 cm2 ¥ 54 cm) extracted under these varying extraction conditions, and over filled with 48 cm (78 L) seawater, which was aerated with a the use of AVS as a proxy for FeS. In defense of the AVS con- bubble stone. cept, Meysman and Middelburg (2005) stated that despite the Within 1 week of collection, we sectioned one sediment simplified models, operationally defined pools like AVS and core at a time at 5-mm intervals to a depth of 90 mm. The organic matter have played key roles in developing our under- upper sediment section (0–5 mm) was discarded as it was dis- standing of sedimentary chemistry; in agreement with Luther turbed during transport of the sediment cores. All other sedi- III (2005), the authors concluded that the AVS concept should ment slices were homogenized before removing 4¥ ~1 g sedi- not be disregarded. ment for AVS determination. We divided the remainder evenly In search of a rapid method for determining sedimentary for the determination of sediment color intensity, water con- AVS content, Bull and Williamson (2001) tested a new labora- tent, organic content, and particle size distribution. We tory approach to estimate the AVS content of estuarine sedi- processed each slice before cutting the next, keeping the air ment from photographs of sediment sections. They vertically exposure of the sediment below 3 min. The effect of such sliced sediment cores, imaged the core section with film pho- exposure on the oxidation of AVS compounds is negligible tography and studio lighting, and analyzed the AVS content of (Williamson et al. 1999; van Griethuysen et al. 2002). sediment collected from arbitrary points of the exposed sec- AVS determination tion. The authors extracted and quantified AVS with an acid We added each of the four samples from a sediment slice microdiffusion method and an ion-selective electrode (see above) into a 40 mL glass vial filled with 30 mL HCl (Williamson et al. 1999). These techniques revealed a weak (1 mol L-1, ACS grade) that was deoxygenated by purging with linear correlation (R2 = 0.67) between AVS concentration and nitrogen for ≥ 20 min. The vial was closed with an airtight lid sediment color intensity, but the authors believed that the and briefly shaken. We weighed each HCl filled vial before and actual relationship between AVS concentration and sediment after adding sediment to determine the mass of sediment used color intensity was stronger than their data suggested. in the extraction. We left the vials to stand while sectioning One opportunity to increase the strength of the AVS con- the remainder of the core. The sediment sampling was com- centration–color intensity correlation lies in the choice of pleted within 1 h. methods used to quantify AVS and sediment color intensity. We used an amperometric H2S microelectrode (Unisense Here, we explore this opportunity to develop an approach for A/S, 500-µm tip diameter, response time ~1 s) to measure the the assessment of subtidal soft sediment. Our first goal was to concentration of H2S in the HCl extractant. The microelec- test if substituting laboratory film photography with digital trode is filled with a ferricyanide solution (K3[Fe(CN)6]) that is imaging, and modifying the analytical method for sulfide reduced to ferrocyanide (K4[Fe(CN)6]) in the presence of H2S, quantification, resulted in a stronger correlation between sed- which diffuses from the surrounding HCl extractant through iment AVS content and color intensity. Our second goal was to the silicone membrane of the microelectrode tip (Jeroschewski demonstrate that an automated image analyzing procedure 1996; Kühl et al. 1998). A current, linearly proportional to the can estimate the in situ distribution of AVS from images concentration of H2S, is produced when the reduced ferro- obtained with a lightweight sediment profile-imaging device cyanide is re-oxidized. The microelectrode was calibrated with (SPI-Scan™, Benthic Science). freshly prepared sulfide standards. To prepare the standards, 0, 150, 250, and 350 µmol L-1, aliquots of a stock solution of Materials and procedures Na2S·9H2O (0.1 mol L-1) were added to 30 mL deoxygenated In the following, we describe a procedure that consists of HCl (1 mol L-1). The concentration of sulfide in the stock solu- two steps: (1) we analyzed soft subtidal sediment in the labo- tion was measured by iodometric titration using standard ratory to correlate sediment AVS concentration with color iodine (0.05 mol L-1) and sodium thiosulfate (0.1 mol L-1) solu- intensity. We refer to this step as the calibration. (2) We tions (Vogel 1989). applied the established AVS concentration–color intensity cor- Color analysis relation to sediment profile images, obtained in situ, to esti- We scanned each homogenized sediment sample with a mate the two-dimensional distribution of AVS. flatbed scanner (CanoScan LiDE 100, Canon) at a resolution of Calibration: Correlating AVS content and color intensity 600 dpi (0.04 mm pixel-1). The flatbed scanner illuminated the We collected seven cores of soft subtidal sediment using sediment with LEDs. A color calibration strip was scanned SCUBA from an arbitrary location in Man o’War Bay, Waiheke alongside the sediment (shown in Fig. 1). The resulting image Island, New Zealand at a water depth of 12 m. The tubes were was imported into the software analySIS FIVE LS Research 3.3 pushed vertically into the sediment until two-thirds were (Olympus Soft Imaging Solutions), and color analysis was filled with sediment and then sealed with stoppers on both automated using a macro (details shown in Web Appendix A): ends to minimize sediment disturbance. The sediment-filled The intensity channel of the sediment profile image was 1071
Wilson and Vopel Estimating in situ AVS from SPI images Fig. 1. An example image of a homogenized sample of soft, subtidal sediment and a color calibration strip obtained with a flatbed scanner. We used the shaded area to measure the average sediment color intensity. The white asterisks show the locations of air bubbles that we excluded from the mea- surement. extracted as defined by the hue, saturation, and intensity (HSI) (Minitab Inc., v. 16.1.0). We chose to place color intensity on color space, creating a gray-scale image. the x-axis as the error associated with this measurement will A 4 ¥ 4 pixel averaging filter was applied to the entire image be very small; over 100,000 pixels are averaged to obtain the to minimize the effects of noise and anomalies in the image. gray value, whereas only four measurements are averaged to The gray-scale range of the image was adjusted linearly to obtain the AVS concentration. This configuration will produce cover the maximum available value range, that is, the black the most representative regression using optimized least and white calibration squares at the bottom of the image (Fig. squares. 1) were assigned values of 0 and 255, respectively. The bright- Application: In situ SPI analysis est 2% and darkest 2% of the pixels were ignored during this We used the AVS–color intensity correlation established by step as some images contained artifacts that were brighter or the procedure described above to estimate the in situ distribu- darker than the calibration strip, voiding this step. tion of AVS by means of analyses of sediment profile images. We then averaged the intensity values over the entire sam- To obtain profile images of the sediment, we deployed a sedi- ple, approximately 50 cm2, excluding anomalies such as air ment-profile imaging device (SPI-Scan, Fig. 2) consisting of a bubbles (see Fig. 1), to obtain an average gray value. modified consumer flatbed scanner (CanoScan LiDE 25, Data analysis Canon; c.f. scanner used in the laboratory, CanoScan LiDE We verified the normality of the AVS and color intensity 100), housed inside a polycarbonate cylinder (8.5 cm diame- data individually with the Anderson–Darling test and applied ter, 28 cm length). The electrical components are contained in a quadratic fit using color intensity on the x-axis and AVS con- a larger elliptical body (42 ¥ 30 ¥ 8 cm, hereafter, electronics centration as the on the y-axis, with the software Minitab housing) attached to the top of the cylinder. The scanner 1072
Wilson and Vopel Estimating in situ AVS from SPI images trations into 1 µmol g-1 wet weight sediment (hereafter, µmol g-1 WW) ranges and assigned colors from blue through to red for low to high concentrations (Fig. 3B and D, color assign- ment details available in Web Appendix A). To generate a vertical AVS concentration profile (overlaid on Fig. 3A and C), we defined a rectangular area, excluding major anomalies such as air bubbles. The analySIS software then calculated the average gray value for every row of pixels within this area. Following this step, we averaged the average gray values of 50 rows, approximately 4.2 mm, to produce one data point. This step was used to reduce the number of data points in the profile. Finally, we converted the average gray values to AVS concentrations with the previously derived cor- relation equation. Assessment Calibration: Correlating AVS content and color intensity The sediment’s water content, determined by drying at 90°C for 24 h, decreased from 75% in the upper layer to 65% at a depth of 9 cm. Its organic content, determined as weight loss after combustion in a furnace for 6 h at 400°C, was 6.3 ± 0.9% (dry weight, mean ±SD, n = 54). Particle size (% volume) analysis with a laser-based particle analyzer (Malvern Master- sizer 2000) revealed that the upper 9 cm of the sediment were comprised of 9% clay, 73% silt, and 17% sand (based on the Wentworth scale). The H2S microelectrode responded linearly (minimum R2 = Fig. 2. A prototype sediment profile imaging device (SPI-Scan™, Benthic 0.991) to H2S concentration. The measurement of one extract Science) used in this study to acquire sediment profile images. (A) Electri- cal tether that connects the device to a 24 V power source and computer was completed in ~10 s. The H2S concentrations in the extract on the surface; (B) scanner electronics housing; (C) scan head; (D) frame. ranged from 4 to 350 µmol L-1, which corresponded to 0.14 to 5.01 µmol AVS g-1 WW. Statistical outliers within the four AVS measurements per sediment slice were identified with Grubb’s moves along the inner surface of the cylinder over a horizon- outlier test and removed. tal distance of 120 mm to acquire a sediment image. A color The color intensity of the homogenized sediment from calibration strip, identical to the one used in the laboratory, is each slice was derived from the average gray value of ~200,000 attached to the outside the cylinder and included in every pixels (see “Methods and procedures”). The average 95% con- scan. The combined weight of the device and frame is ~20 kg, fidence interval of this measurement was 0.006 ± 0.001 gray making it considerably lighter than traditionally used sedi- values (mean ±SD, n = 117). ment imaging devices such as REMOTS, which weighs ~60 kg A quadratic function best described the relationship (Rhoads and Cande 1971; Rhoads and Germano 1982; Rosen- between sediment AVS concentration and color intensity (R2 = berg et al. 2001; Solan and Kennedy 2002). The depth to 0.95, Fig. 4). The average 95% individual confidence interval which the cylinder penetrated the sediment was adjusted by was 0.531 ± 0.005 µmol AVS g-1 WW (mean ±SD, n = 117). attaching 4 ¥ 1 kg weights to the electronics housing so that Application: In situ SPI and analysis the sediment–water interface was approximately one-third of The established correlation between sediment AVS content the distance from the top of the sediment profile image. An and color intensity was applied to sediment profile images electrical tether connected the device to a 24 V power supply obtained as described above. The SPI-Scan imaged an area and a computer on the boat. (including sediment and water column) of 117 ¥ 216 mm at a Sediment profile images were analyzed using the same 3- resolution of 300 dpi (0.08 mm pixel-1) within 60 s. step automated procedure used to analyze images of the sedi- The scan of the sediment profile was started immediately ment in the laboratory (see above). An additional step was after the device was in place to exclude possible effects of the added to the macro to produce a false-color image. The false- movement of the scan head inside the sediment on the sedi- color image was generated by assigning the gray value of each ment profile image. Such movement could result from the pixel to the corresponding AVS concentration with the previ- pull of the attached tether due to strong currents or boat drift. ously derived correlation equation. We grouped AVS concen- The sediment profile images shown in Fig. 3A and C con- 1073
Wilson and Vopel Estimating in situ AVS from SPI images Fig. 3. (A and C) Two examples of sediment profile images obtained with the SPI-Scan in Sep 2010 from Man o’War Bay, Waiheke Island, New Zealand. Small black and white bars on the scale to the right of each image are 1 mm; the larger bars are 10 mm. The images are overlaid with vertical AVS con- centration ([AVS], µmol g-1 wet weight) profiles derived from image analysis. The error bars that are visible denote the 95% confidence interval. (B and D) Two-dimensional AVS distribution plots derived from the images A and C, respectively. 1074
Wilson and Vopel Estimating in situ AVS from SPI images intervention, by the previously described analySIS macro (details in Web Appendix A). Discussion We found a strong correlation (R2 = 0.95, see Fig. 4) between the AVS content of soft subtidal sediment and the sediment’s color intensity. Given the predictive power of this correlation and the simplicity of the procedure, we believe that estimating the distributions of AVS from sediment profile images can become a powerful tool in the routine assessment of subtidal organically enriched sediment, for example, sedi- ments underneath and in the vicinity of marine farms, in ports, or polluted estuaries. The collection of sediment cores is only required for the initial calibration (AVS–color intensity correlation); this makes large-scale AVS surveys possible. Fur- thermore, our approach enables us to study how processes such as bioturbation and particle resuspension effect the micro-scale distribution of AVS in the upper 20 cm of sedi- ment. Estimating AVS from sediment profile images relies on the assumptions that all AVS compounds are colored and that all colored AVS compounds are quantitatively extracted. Two Fig. 4. A scatter plot showing the relationship between the AVS con- pools do not comply with these assumptions. First, the color- centration (µmol g-1 wet weight) and color intensity of soft, subtidal sed- less dissolved sulfide species, of which the main contributors iment (upper 9 cm) collected from Man o’War Bay, Waiheke Island, New are H2S and HS-, are included in the acid extraction but impos- Zealand. A color intensity of 0 is black, and that of 255 is white. The solid sible to detect using visible light. Second, some colored sulfide line is a quadratic fit through all points ([AVS] = 0.002x2 – 0.521x + 34.3, minerals are not extracted quantitatively, if at all. For exam- R2 = 0.95); the 95% confidence interval is shown by the dashed lines on either side. ple, cold 1 mol L-1 HCl does not extract pyrite, and only extracts ~40% to 67% of greigite and 92% of mackinawite (Rickard and Morse 2005). This nonquantitative extraction tained an artifact caused by the instrument that can be seen may render AVS concentration estimates inaccurate if the rel- from the top of the image down to the cyan circle. The color ative concentrations of these pools were to change either tem- property affected by this artifact was hue, with the exception porally or spatially. The formation of pyrite in organically of a narrow band level with the 50% gray calibration square. enriched sediments may be impeded according to Morse and Because the majority of this artifact did not affect our AVS esti- Wang (1997). The authors reported an increased reaction rate mates, correction of the profile images was not necessary. The between dissolved sulfide and iron (hydr)oxide (goethite), but effect of the narrow band can be seen as an increased error of a significant decrease in the rate of pyrite formation when the average AVS concentration derived from gray values of organic matter was present. Reduced formation of pyrite pixels in this area. The AVS content was determined by image results in a larger proportion of sulfur species that, unlike analysis using the previously established correlation between pyrite, are both colored and acid extractible. The possible con- sediment AVS concentration and color intensity. tribution of colorless sulfides to AVS and incomplete extrac- The vertical AVS concentration profile derived from the tion of some colored sulfides warrant further investigation, sediment profile image in Fig. 3A ranged from 1.6 µmol g-1 and need to be considered before replacing time consuming WW in the top 4 mm of sediment to 4.4 µmol g-1 WW at a AVS analysis with sediment profile image analysis. A third depth of 30 mm. Similarly, analysis of the sediment profile issue for future consideration is the role of colored non-AVS image in Fig. 3C resulted in a vertical AVS concentration pro- components, such as organic debris. Large components could file ranging from 2.1 µmol g-1 WW in the top 4 mm of sedi- be excluded from the sediment image analyses and therefore ment to 3.9 µmol g-1 WW at a depth of 140 mm. not influence the calibration procedure. Producing an average vertical AVS concentration profile by Our data are best represented by a quadratic function (n = analysis of a sediment profile image required ~5 min. In con- 117, R2 = 0.95). This is at variance with the linear relationship trast, producing one average AVS profile by sectioning a sedi- (n = 40, R2 = 0.62) published by Bull and Williamson (2001). ment core and extracting AVS with acid in the laboratory Inspection of the fit in Fig. 4 revealed an increased slope at required ~2 h. The two-dimensional AVS distribution plots, lower color intensities, that is, the technique is less sensitive at shown in Fig. 3B and D, were derived in ~1 s, with no user higher AVS concentrations. One possible cause for this differ- 1075
Wilson and Vopel Estimating in situ AVS from SPI images ence in sensitivity is the nonquantitative extraction of colored sediment content of dissolved colorless and non-extractable sulfide minerals. The highest concentrations of AVS were colored minerals may not be as important as the ability to obtained from dark-colored samples that likely contained a track temporal and spatial change in the colored AVS content. larger proportion of the minerals mackinawite and greigite, One possible application for this technique is in the assess- which are not quantitatively extracted. ment of the effects of aquaculture farms on benthic ecosystem To compare our AVS concentration estimates with that in function. In this example, two factors are of interest: first, Bull and Williamson (2001) we expressed our measured wet temporal changes in the size of the affected area of seafloor, sediment AVS content per dry weight sediment and applied a that is, the area at which the sediment AVS content is larger linear fit to describe the relationship between this content and than that of the background. Time-series of sediment profile the corresponding gray values (AVS concentration = -0.323 ¥ images taken along transects that intersect the farm will reveal color intensity + 38.8; R2 = 0.93). To do so, we assumed that such change. Second, changes over time in the intensity of the the porewater was free of sulfides, and that the sediment water impact, that is, the maximum concentration of sedimentary content decreased linearly from 75% wet weight in the surfi- AVS, can be revealed from the same time-series. The small size cial layer to 65% wet weight at a depth of 9 cm. The compar- of the SPI-Scan and the rapid scanning and image analyzing ison revealed that, for a color intensity range of 80–120, our procedure will ideally be suited to assess sediment underneath correlation predicted AVS concentrations 2.3 µmol g-1 dry and in the vicinity of, for example, closely spaced long-lines weight higher on average than that used by Bull and or fish cages. Williamson (2001). Despite the differences in sediment type (intertidal estuarine versus subtidal coastal), color determina- References tion, and AVS quantification, these estimates are surprisingly Bagarinao, T. 1992. Sulfide as an environmental factor and similar. This indicates that the correlation between AVS con- toxicant: Tolerance and adaptations in aquatic organisms. tent and sediment color intensity may be valid for a variety of Aquat. Toxicol. 24:21-62 [doi:10.1016/0166-445X(92) sediment types in the Auckland region, one prerequisite for 90015-F]. large-scale spatial surveys. Future studies may determine Berner, R. A. 1964. Distribution and diagenesis of sulfur in whether this correlation holds for sediments outside the Auck- some sediments from the Gulf of California. Mar. Geol. land region. 1:117-140 [doi:10.1016/0025-3227(64)90011-8]. Bull and Williamson (2001) identified precise color repro- Brüchert, V. 1998. Early diagenesis of sulfur in estuarine sedi- duction as their primary concern. Their process of vertically ments: The role of sedimentary humic and fulvic acids. slicing sediment cores in the laboratory, taking photographs Geochim. Cosmochim. Acta 62:1567-1586 [doi:10.1016/ under studio lighting using film photography, developing the S0016-7037(98)00089-1]. film, and digitizing the photographs introduced errors in the Bull, D. C., and R. B. Williamson. 2001. Prediction of principal reproduction of sediment color. We minimized oxidation of metal-binding solid phases in estuarine sediments from the sediment by horizontally slicing the sediment core so that color image analysis. Environ. Sci. Technol. 35:1658-1662 only a small portion of the sediment was exposed to air for a [doi:10.1021/es0015646]. short time (< 3 minutes). Using a flatbed scanner in the labo- Canfield, D. E., and others. 1993a. Pathways of organic carbon ratory, we could eliminate color reproduction issues intro- oxidation in three continental margin sediments. Mar. duced by film photography and photo digitization. The scan- Geol. 113:27-40 [doi:10.1016/0025-3227(93)90147-N]. ning hardware used in the laboratory and in situ used the ———, B. Thamdrup, and J. W. Hansen. 1993b. 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